BLASTX nr result

ID: Ophiopogon24_contig00027257 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00027257
         (580 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010918593.1| PREDICTED: cyclin-dependent protein kinase i...    63   3e-09
ref|XP_008803458.1| PREDICTED: cyclin-dependent protein kinase i...    60   4e-08

>ref|XP_010918593.1| PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like
           [Elaeis guineensis]
          Length = 123

 Score = 62.8 bits (151), Expect = 3e-09
 Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
 Frame = -1

Query: 475 MSVSPEYSGAPLGTLLRPISTTVVQIADEGEIFTFPKDNQSVG-CMTPTREEFXXXXXXX 299
           MS SP++S  P  ++LRPI  TV  I D  ++ +F      V  C TPT EE        
Sbjct: 1   MSASPDFSAVPSESVLRPI-VTVFPIEDRDKLSSFVNGEDGVNECRTPTSEESRIPPVPS 59

Query: 298 XXXXXXXXXXRVVRCKRRLSELEFVVVRHEEMESLFRRRD 179
                     +V+ CKRRLSELE    R EE+E  FR+RD
Sbjct: 60  SCPPAPKKPRQVLLCKRRLSELELFSARLEEIEVWFRQRD 99


>ref|XP_008803458.1| PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like
           [Phoenix dactylifera]
 ref|XP_008803459.1| PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like
           [Phoenix dactylifera]
          Length = 125

 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 44/121 (36%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
 Frame = -1

Query: 475 MSVSPEYSGAPLGTLLRPISTTVVQIADEGEIFTFPKDNQSVG-CMTPTREEFXXXXXXX 299
           MS SP++SG P   +LRPI  TV  I D  ++ +       V  C TPT EE        
Sbjct: 1   MSASPDFSGVPPELVLRPI-VTVFPIEDRDDLSSLINGKDGVDECRTPTSEESKIPPVPS 59

Query: 298 XXXXXXXXXXRVVRCKRRLSELEFVVVRHEEMESLFRRRDYDDESVQL-----KKKRTMI 134
                     +V+ CKRRLSELE    + EE+E  FR+RD       L     K+KR  +
Sbjct: 60  SCPPAPKKPRQVLLCKRRLSELELFGAQVEEIELWFRQRDRPATVPSLSCRSKKRKRRCL 119

Query: 133 D 131
           D
Sbjct: 120 D 120


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