BLASTX nr result

ID: Ophiopogon24_contig00027230 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00027230
         (403 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274608.1| GPN-loop GTPase 1 [Asparagus officinalis] >g...    69   8e-11
ref|XP_010938216.1| PREDICTED: GPN-loop GTPase 1 isoform X1 [Ela...    61   3e-08
ref|XP_008781155.1| PREDICTED: GPN-loop GTPase 1 [Phoenix dactyl...    60   1e-07

>ref|XP_020274608.1| GPN-loop GTPase 1 [Asparagus officinalis]
 gb|ONK63249.1| uncharacterized protein A4U43_C07F12920 [Asparagus officinalis]
          Length = 395

 Score = 68.6 bits (166), Expect = 8e-11
 Identities = 38/65 (58%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +3

Query: 210 MDIDPEPNSSKAMQMDSEEPTSNGVNEKGKEK-EXXXXXXXXXXXXXXXXXFKRKPVIVI 386
           MDIDPE NSS  MQM+ E+PTSNGVN KGKEK E                 FK+KPVI+I
Sbjct: 1   MDIDPERNSSNPMQMELEKPTSNGVNGKGKEKEEVLESIEKLNISESSSSSFKKKPVIII 60

Query: 387 VVGMA 401
           VVGMA
Sbjct: 61  VVGMA 65


>ref|XP_010938216.1| PREDICTED: GPN-loop GTPase 1 isoform X1 [Elaeis guineensis]
 ref|XP_010938217.1| PREDICTED: GPN-loop GTPase 1 isoform X1 [Elaeis guineensis]
          Length = 393

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 35/66 (53%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
 Frame = +3

Query: 210 MDIDPEPNSSKAMQMDSEEPTSNGVNEKGKEKE--XXXXXXXXXXXXXXXXXFKRKPVIV 383
           MDID  P+SSK +QMD EEP  +G N KGKEKE                   FKRKPVI+
Sbjct: 1   MDIDSGPSSSKPVQMDLEEPCDSGSNSKGKEKEELSESIDKLHISESSSNGNFKRKPVII 60

Query: 384 IVVGMA 401
           IVVGMA
Sbjct: 61  IVVGMA 66


>ref|XP_008781155.1| PREDICTED: GPN-loop GTPase 1 [Phoenix dactylifera]
          Length = 398

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 34/66 (51%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +3

Query: 210 MDIDPEPNSSKAMQMDSEEPTSNGVNEKGKEKE--XXXXXXXXXXXXXXXXXFKRKPVIV 383
           MDID   +SSKA+QMD EEP+ +G N KGKEKE                   F+RKPVI+
Sbjct: 1   MDIDSGSSSSKAVQMDLEEPSESGSNSKGKEKEELSESIEKLHISESSSNGNFRRKPVII 60

Query: 384 IVVGMA 401
           IVVGMA
Sbjct: 61  IVVGMA 66


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