BLASTX nr result
ID: Ophiopogon24_contig00027184
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00027184
(559 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019708714.1| PREDICTED: transcription termination factor ... 81 9e-15
gb|KVH98345.1| Mitochodrial transcription termination factor-rel... 79 5e-14
gb|OUZ99530.1| Mitochodrial transcription termination factor-rel... 79 7e-14
ref|XP_008799154.1| PREDICTED: transcription termination factor ... 77 2e-13
ref|XP_010270622.1| PREDICTED: transcription termination factor ... 76 5e-13
dbj|GAV84799.1| mTERF domain-containing protein, partial [Cephal... 77 5e-13
ref|XP_010910994.1| PREDICTED: transcription termination factor ... 76 6e-13
emb|CBI37711.3| unnamed protein product, partial [Vitis vinifera] 75 2e-12
ref|XP_019184241.1| PREDICTED: transcription termination factor ... 72 1e-11
ref|XP_002280082.1| PREDICTED: transcription termination factor ... 72 1e-11
emb|CAN78574.1| hypothetical protein VITISV_020582 [Vitis vinifera] 72 1e-11
gb|PON75190.1| Mitochodrial transcription termination factor [Pa... 71 3e-11
gb|PON48343.1| Mitochodrial transcription termination factor [Tr... 70 7e-11
ref|XP_009386699.1| PREDICTED: transcription termination factor ... 70 7e-11
ref|XP_023728508.1| transcription termination factor MTERF6, chl... 69 1e-10
ref|XP_020681296.1| transcription termination factor MTERF6, chl... 69 1e-10
emb|CDP18720.1| unnamed protein product [Coffea canephora] 68 5e-10
ref|XP_003542522.1| PREDICTED: transcription termination factor ... 68 5e-10
ref|XP_015058920.1| PREDICTED: uncharacterized protein LOC107004... 67 7e-10
ref|XP_006352102.1| PREDICTED: uncharacterized protein LOC102585... 67 7e-10
>ref|XP_019708714.1| PREDICTED: transcription termination factor MTERF6,
chloroplastic/mitochondrial-like [Elaeis guineensis]
Length = 325
Score = 80.9 bits (198), Expect = 9e-15
Identities = 46/98 (46%), Positives = 54/98 (55%), Gaps = 19/98 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD--- 81
ME S QK+ I FF+EKG DD+ I MFRRCK +W+YLKSIGI +
Sbjct: 1 MERSSDQKISIRSFFREKGFDDESIQLMFRRCKWLEVADGERACENWNYLKSIGIQERKL 60
Query: 80 ----------------EKLVPTVQCLATLGTKPGEVGI 15
EKLVP VQCLATLGTKPG+V +
Sbjct: 61 PCVVSKCPKILALGLNEKLVPMVQCLATLGTKPGDVAL 98
>gb|KVH98345.1| Mitochodrial transcription termination factor-related protein,
partial [Cynara cardunculus var. scolymus]
Length = 368
Score = 79.3 bits (194), Expect = 5e-14
Identities = 53/126 (42%), Positives = 65/126 (51%), Gaps = 22/126 (17%)
Frame = -3
Query: 332 AEEKGDLTAST*---RKVILSTD*SITAGTME*SKSQKVHII*FFKEKGLDDDHIDDMFR 162
AEE+G T S VI + S +G M+ S S I+ FFK KG D+ I+++FR
Sbjct: 8 AEEEGIRTPSATLFAAPVISISGGSNISGHMDISNSHNNSILWFFKHKGFDEKGINEIFR 67
Query: 161 RCKXXXXXXXXXXXXSWDYLKSIGIHD-------------------EKLVPTVQCLATLG 39
+CK +WDYLKSIGIH+ EKLVP VQCLATLG
Sbjct: 68 KCKRLECVQKENLSANWDYLKSIGIHERKLPSIVTKCPRIMTLDLNEKLVPMVQCLATLG 127
Query: 38 TKPGEV 21
TKP EV
Sbjct: 128 TKPDEV 133
>gb|OUZ99530.1| Mitochodrial transcription termination factor-related [Macleaya
cordata]
Length = 336
Score = 78.6 bits (192), Expect = 7e-14
Identities = 44/98 (44%), Positives = 53/98 (54%), Gaps = 19/98 (19%)
Frame = -3
Query: 257 GTME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD- 81
G+ME ++ I+ FF+EKG DD +ID+MF RCK +W YLKSIGI +
Sbjct: 4 GSMEIGRTHNGSIVGFFREKGFDDKNIDEMFNRCKRLEGAERERASENWAYLKSIGIQER 63
Query: 80 ------------------EKLVPTVQCLATLGTKPGEV 21
EKLVP VQCLATLGTKP EV
Sbjct: 64 KLPSVVSKCPKILTLGLNEKLVPMVQCLATLGTKPSEV 101
>ref|XP_008799154.1| PREDICTED: transcription termination factor MTERF6,
chloroplastic/mitochondrial [Phoenix dactylifera]
Length = 362
Score = 77.4 bits (189), Expect = 2e-13
Identities = 43/100 (43%), Positives = 54/100 (54%), Gaps = 19/100 (19%)
Frame = -3
Query: 257 GTME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD- 81
GTME + +K+ +I F +EK DD+ I M RRCK +W+YLKSIGI +
Sbjct: 17 GTMERTSDKKISMIAFLREKEFDDESIQGMLRRCKWLEVADGERACENWNYLKSIGIRER 76
Query: 80 ------------------EKLVPTVQCLATLGTKPGEVGI 15
EKLVP VQCLATLGTKPG+V +
Sbjct: 77 KLPCVVSKCPKILTLGLNEKLVPMVQCLATLGTKPGDVAL 116
>ref|XP_010270622.1| PREDICTED: transcription termination factor MTERF6,
chloroplastic/mitochondrial [Nelumbo nucifera]
ref|XP_010270623.1| PREDICTED: transcription termination factor MTERF6,
chloroplastic/mitochondrial [Nelumbo nucifera]
Length = 331
Score = 76.3 bits (186), Expect = 5e-13
Identities = 44/96 (45%), Positives = 53/96 (55%), Gaps = 19/96 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD--- 81
ME S SQK II FF+E+G D+ +I +MF+RCK +WDYL+SIGI +
Sbjct: 1 MEISSSQKGSIIGFFRERGFDEKNIHEMFKRCKRLEGTERERASQNWDYLRSIGIQERKL 60
Query: 80 ----------------EKLVPTVQCLATLGTKPGEV 21
EKLVP VQCLATLGTK EV
Sbjct: 61 PSVVSKCPKILTLGLNEKLVPMVQCLATLGTKQNEV 96
>dbj|GAV84799.1| mTERF domain-containing protein, partial [Cephalotus follicularis]
Length = 400
Score = 76.6 bits (187), Expect = 5e-13
Identities = 47/106 (44%), Positives = 53/106 (50%), Gaps = 23/106 (21%)
Frame = -3
Query: 269 SITAGTME*SKSQK----VHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYL 102
S T G ME SQ I+ FFK++G DD I +MF +CK +WDYL
Sbjct: 60 STTKGNMELGSSQNGGAACSIMWFFKDRGFDDSSIHNMFTKCKRLQGIQSERASQNWDYL 119
Query: 101 KSIGIH-------------------DEKLVPTVQCLATLGTKPGEV 21
KSIGI DEKLVP VQCL TLGTKPGEV
Sbjct: 120 KSIGIQERKLVNLVSKCPKLLALGLDEKLVPMVQCLTTLGTKPGEV 165
>ref|XP_010910994.1| PREDICTED: transcription termination factor MTERF6,
chloroplastic/mitochondrial-like [Elaeis guineensis]
Length = 331
Score = 75.9 bits (185), Expect = 6e-13
Identities = 44/98 (44%), Positives = 52/98 (53%), Gaps = 19/98 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD--- 81
ME S +QK+ I+ FFKEKG DD I MF+RCK +W+YLKSIGI +
Sbjct: 1 MEKSSNQKISIMGFFKEKGFDDGSIQKMFQRCKQLEFLDGERACENWNYLKSIGIQERKL 60
Query: 80 ----------------EKLVPTVQCLATLGTKPGEVGI 15
EKLV TVQCL TLG KPG V +
Sbjct: 61 PSVVSKCPKIITLGLNEKLVCTVQCLTTLGAKPGGVAL 98
>emb|CBI37711.3| unnamed protein product, partial [Vitis vinifera]
Length = 354
Score = 74.7 bits (182), Expect = 2e-12
Identities = 44/107 (41%), Positives = 56/107 (52%), Gaps = 19/107 (17%)
Frame = -3
Query: 284 LSTD*SITAGTME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDY 105
LS+ + G ME S SQ I+ FF++KG DD I +MF++CK +W Y
Sbjct: 13 LSSPDFLGKGDMEISSSQNGSIMWFFRDKGFDDKSIHEMFKKCKRLEGVHRDRASENWAY 72
Query: 104 LKSIGIHD-------------------EKLVPTVQCLATLGTKPGEV 21
L++IGI D EK+VP VQCLATLGTKP EV
Sbjct: 73 LRTIGIQDRKIPSIVTKCPKILALGLNEKIVPMVQCLATLGTKPSEV 119
>ref|XP_019184241.1| PREDICTED: transcription termination factor MTERF6,
chloroplastic/mitochondrial [Ipomoea nil]
ref|XP_019184242.1| PREDICTED: transcription termination factor MTERF6,
chloroplastic/mitochondrial [Ipomoea nil]
Length = 328
Score = 72.4 bits (176), Expect = 1e-11
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 19/96 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD--- 81
ME + S ++ FFK++G DD I +MF++CK +WDYLKSIGI +
Sbjct: 1 METTSSHSSGVMWFFKDRGFDDKSIHEMFQKCKRLEGMQRENASENWDYLKSIGIKERKL 60
Query: 80 ----------------EKLVPTVQCLATLGTKPGEV 21
EKLVP VQCLATLGTKP EV
Sbjct: 61 PSIIRKCPKILTLGLHEKLVPMVQCLATLGTKPDEV 96
>ref|XP_002280082.1| PREDICTED: transcription termination factor MTERF6,
chloroplastic/mitochondrial [Vitis vinifera]
Length = 331
Score = 72.4 bits (176), Expect = 1e-11
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 19/96 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD--- 81
ME S SQ I+ FF++KG DD I +MF++CK +W YL++IGI D
Sbjct: 1 MEISSSQNGSIMWFFRDKGFDDKSIHEMFKKCKRLEGVHRDRASENWAYLRTIGIQDRKI 60
Query: 80 ----------------EKLVPTVQCLATLGTKPGEV 21
EK+VP VQCLATLGTKP EV
Sbjct: 61 PSIVTKCPKILALGLNEKIVPMVQCLATLGTKPSEV 96
>emb|CAN78574.1| hypothetical protein VITISV_020582 [Vitis vinifera]
Length = 362
Score = 72.4 bits (176), Expect = 1e-11
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 19/96 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD--- 81
ME S SQ I+ FF++KG DD I +MF++CK +W YL++IGI D
Sbjct: 1 MEISSSQNGSIMWFFRDKGFDDKSIHEMFKKCKRLEGVHRDRASENWAYLRTIGIQDRKI 60
Query: 80 ----------------EKLVPTVQCLATLGTKPGEV 21
EK+VP VQCLATLGTKP EV
Sbjct: 61 PSIVTKCPKILALGLNEKIVPMVQCLATLGTKPSEV 96
>gb|PON75190.1| Mitochodrial transcription termination factor [Parasponia
andersonii]
Length = 326
Score = 71.2 bits (173), Expect = 3e-11
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 19/86 (22%)
Frame = -3
Query: 221 II*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD------------- 81
I+ FF++KG DD I+DMF++CK +W YLKS+GI +
Sbjct: 10 IMWFFRDKGFDDKSINDMFKKCKRLECVEKERASENWAYLKSVGIQERKLPSVISKCPKI 69
Query: 80 ------EKLVPTVQCLATLGTKPGEV 21
EKLVPTV+CL TLGTKPGEV
Sbjct: 70 LTLGLHEKLVPTVECLNTLGTKPGEV 95
>gb|PON48343.1| Mitochodrial transcription termination factor [Trema orientalis]
Length = 324
Score = 70.1 bits (170), Expect = 7e-11
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 19/86 (22%)
Frame = -3
Query: 221 II*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD------------- 81
I+ FF++KG DD I+DMF++CK +W YLK++GI +
Sbjct: 8 IMWFFRDKGFDDKSINDMFKKCKRLECVERERASENWAYLKTVGIQERKLPSVISKCPKI 67
Query: 80 ------EKLVPTVQCLATLGTKPGEV 21
EKLVPTV+CL TLGTKPGEV
Sbjct: 68 LTLGLHEKLVPTVECLNTLGTKPGEV 93
>ref|XP_009386699.1| PREDICTED: transcription termination factor MTERF6,
chloroplastic/mitochondrial [Musa acuminata subsp.
malaccensis]
Length = 331
Score = 70.1 bits (170), Expect = 7e-11
Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 19/96 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIH---- 84
ME S Q++ I+ F +EKG DD+ I M RRC +W+YL+SIG+
Sbjct: 1 MERSTDQQLTIVEFLREKGFDDESIKRMVRRCNPLEITGRDRASENWNYLESIGVQKRKL 60
Query: 83 ---------------DEKLVPTVQCLATLGTKPGEV 21
++KLVPTVQCLATLG++PGEV
Sbjct: 61 PYVVFKCPKVLTLGLNQKLVPTVQCLATLGSRPGEV 96
>ref|XP_023728508.1| transcription termination factor MTERF6,
chloroplastic/mitochondrial-like [Lactuca sativa]
ref|XP_023728509.1| transcription termination factor MTERF6,
chloroplastic/mitochondrial-like [Lactuca sativa]
gb|PLY77890.1| hypothetical protein LSAT_1X20201 [Lactuca sativa]
Length = 331
Score = 69.3 bits (168), Expect = 1e-10
Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD--- 81
M+ S S HI+ FFK KG DD I+++ R+CK +WDYLKSIGI +
Sbjct: 1 MDISNSHNNHILWFFKHKGFDDKGINEILRKCKRLESVQKQNLSENWDYLKSIGIQERKL 60
Query: 80 ----------------EKLVPTVQCLATLGTKPGEV 21
+KL+P +QCL TL TKP EV
Sbjct: 61 PSIITKCPKIMTLDLNQKLIPMIQCLTTLSTKPEEV 96
>ref|XP_020681296.1| transcription termination factor MTERF6,
chloroplastic/mitochondrial [Dendrobium catenatum]
gb|PKU71132.1| hypothetical protein MA16_Dca021702 [Dendrobium catenatum]
Length = 331
Score = 69.3 bits (168), Expect = 1e-10
Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 19/85 (22%)
Frame = -3
Query: 212 FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD---------------- 81
F K KG DD+ I+ MFRRCK WDYL++IGI +
Sbjct: 14 FLKSKGFDDESIERMFRRCKYLDCVERDKASEVWDYLRTIGIQERKMLNVISKCPKVLTL 73
Query: 80 ---EKLVPTVQCLATLGTKPGEVGI 15
EKL+P VQCL+TLGTK GE+G+
Sbjct: 74 NLNEKLLPVVQCLSTLGTKSGELGV 98
>emb|CDP18720.1| unnamed protein product [Coffea canephora]
Length = 331
Score = 67.8 bits (164), Expect = 5e-10
Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 19/96 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD--- 81
ME + S I+ FFK+KG DD I +M ++CK +W YL++IGI +
Sbjct: 1 METTNSHNGGIMWFFKDKGFDDKSIQEMLKKCKRLEGVPREKASENWAYLRTIGIQERKI 60
Query: 80 ----------------EKLVPTVQCLATLGTKPGEV 21
EKLVPTV+CLATLGTKP EV
Sbjct: 61 PSVVGKCPKILTLGLHEKLVPTVECLATLGTKPKEV 96
>ref|XP_003542522.1| PREDICTED: transcription termination factor 3, mitochondrial-like
[Glycine max]
gb|KRH19886.1| hypothetical protein GLYMA_13G141500 [Glycine max]
Length = 335
Score = 67.8 bits (164), Expect = 5e-10
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 19/83 (22%)
Frame = -3
Query: 212 FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHDEKL------------- 72
FFK+KG DD+ + MFR+C+ +WDYL+SIGI + KL
Sbjct: 15 FFKDKGFDDNSVQGMFRKCRRLEGVHQERASENWDYLRSIGIEERKLPSIVSKCPKILAL 74
Query: 71 ------VPTVQCLATLGTKPGEV 21
VPTV+CL TLGTKP EV
Sbjct: 75 DLYGKIVPTVECLRTLGTKPNEV 97
>ref|XP_015058920.1| PREDICTED: uncharacterized protein LOC107004989 [Solanum pennellii]
ref|XP_015058921.1| PREDICTED: uncharacterized protein LOC107004989 [Solanum pennellii]
Length = 328
Score = 67.4 bits (163), Expect = 7e-10
Identities = 39/96 (40%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD--- 81
ME S S I+ FFK+KG DD I++MF++CK +WDYL+SIGI +
Sbjct: 1 METSNSHSSGIMWFFKDKGFDDTSINEMFQKCKRLEGVQREKASENWDYLRSIGIQERKL 60
Query: 80 ----------------EKLVPTVQCLATLGTKPGEV 21
EKL P V CL TLG+KP EV
Sbjct: 61 PSVVRKCPKILTLGLHEKLFPMVNCLETLGSKPQEV 96
>ref|XP_006352102.1| PREDICTED: uncharacterized protein LOC102585837 [Solanum tuberosum]
Length = 328
Score = 67.4 bits (163), Expect = 7e-10
Identities = 39/96 (40%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Frame = -3
Query: 251 ME*SKSQKVHII*FFKEKGLDDDHIDDMFRRCKXXXXXXXXXXXXSWDYLKSIGIHD--- 81
ME S S I+ FFK+KG DD I++MF++CK +WDYL+SIGI +
Sbjct: 1 METSNSHSSGIMWFFKDKGFDDTSINEMFQKCKRLEGVQREKASENWDYLRSIGIQERKL 60
Query: 80 ----------------EKLVPTVQCLATLGTKPGEV 21
EKL P V CL TLG+KP EV
Sbjct: 61 PSVVRKCPKILTLGLHEKLFPMVNCLETLGSKPQEV 96