BLASTX nr result
ID: Ophiopogon24_contig00027112
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00027112
(494 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK79917.1| uncharacterized protein A4U43_C01F11790 [Asparagu... 137 6e-35
ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 ... 110 6e-25
ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB ... 100 2e-21
ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB ... 92 2e-18
ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 ... 88 3e-17
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ... 78 1e-13
ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-... 77 3e-13
ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 ... 75 2e-12
ref|XP_011623893.1| RNA polymerase sigma factor sigB [Amborella ... 74 3e-12
ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-... 73 7e-12
gb|ERM94758.1| hypothetical protein AMTR_s00011p00258380 [Ambore... 71 3e-11
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-... 67 7e-10
gb|OVA12049.1| RNA polymerase sigma-70 [Macleaya cordata] 66 1e-09
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-... 65 5e-09
ref|XP_009409922.1| PREDICTED: RNA polymerase sigma factor sigB-... 62 3e-08
ref|XP_017627350.1| PREDICTED: RNA polymerase sigma factor sigB ... 60 3e-07
gb|KJB46068.1| hypothetical protein B456_007G347300 [Gossypium r... 59 3e-07
gb|KJB46069.1| hypothetical protein B456_007G347300 [Gossypium r... 59 3e-07
gb|KJB46073.1| hypothetical protein B456_007G347300 [Gossypium r... 59 3e-07
ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB ... 59 3e-07
>gb|ONK79917.1| uncharacterized protein A4U43_C01F11790 [Asparagus officinalis]
Length = 531
Score = 137 bits (345), Expect = 6e-35
Identities = 85/167 (50%), Positives = 101/167 (60%), Gaps = 7/167 (4%)
Frame = -2
Query: 487 MASLVPPFNCPSLHQTHTHQAKNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYS---- 320
MASLVPPFNCPSLHQT QAK R SFRI+C S+QMTAVIDFEKTQIP +++YS
Sbjct: 1 MASLVPPFNCPSLHQTP--QAKARGLFSFRIECSSSQMTAVIDFEKTQIPTVESYSNSLA 58
Query: 319 ---SSRFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXXAQM 149
+SR++GA+G P K DF+ATL E LLT A M
Sbjct: 59 AGRASRYVGAVGLPFKADFEATLATEELLTSEEATIEAAAAEAIALARAALEVAKDAALM 118
Query: 148 KGSDASVKLDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETE 8
KG + S+ R EN + D ILLERVR EE+ESLG N+S+ PE E
Sbjct: 119 KGKEPSI--SRSENTQPEHDQILLERVRQEELESLGTENNSSTPEIE 163
>ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 [Asparagus officinalis]
gb|ONK58877.1| uncharacterized protein A4U43_C08F650 [Asparagus officinalis]
Length = 557
Score = 110 bits (274), Expect = 6e-25
Identities = 68/163 (41%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Frame = -2
Query: 487 MASLVPPFNCPSLHQTHTH---QAKNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYSS 317
MA LVP F CPS H H H Q K R PV R QC+S+ MTAVI+ +KT +P LDA+++
Sbjct: 1 MACLVPQFKCPSSHHHHHHHPLQVKPRGPVYVRNQCVSSLMTAVIELDKTYVPTLDAHTN 60
Query: 316 S-------RFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXX 158
S ++GAIGPP+KTD+K T E LLT
Sbjct: 61 SSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIAAAAAEAVALARAAVELAKDA 120
Query: 157 AQMKGSDASVKLDRPENFPSKPDMILLERVRLEEMESLGKAND 29
AQM D VKL++ ENFPS+ D+ L+R L E+E L N+
Sbjct: 121 AQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDTTNN 163
>ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB [Phoenix dactylifera]
Length = 566
Score = 100 bits (248), Expect = 2e-21
Identities = 68/177 (38%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Frame = -2
Query: 487 MASLVPPFNCPS---------LHQTHTHQAKNRCPVSFRIQCISAQMTAVIDFEKTQIPG 335
MA LVP F CPS L + +K R V FR C+S AVID ++ IP
Sbjct: 1 MACLVPQFKCPSISPDAHFRPLSHHPSLNSKARDSVCFRSPCVSTLTAAVIDIQR--IPS 58
Query: 334 LDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXX 176
L+A+S+S ++GA+GPP KT +ATL E LLTG
Sbjct: 59 LEAHSTSLDATRPLTYVGAVGPPMKTSIEATLATETLLTGEEAVIAAAAAEAVALARAAV 118
Query: 175 XXXXXXAQMKGSDASVKLDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEP 5
AQ+ G+D SVKL++ E+F S+ D LERVRL EME + N+S +TEP
Sbjct: 119 EVAKDAAQIIGNDPSVKLEKSEDFSSEADAFRLERVRLTEMELIRTTNNSTPTDTEP 175
>ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB [Elaeis guineensis]
Length = 566
Score = 91.7 bits (226), Expect = 2e-18
Identities = 65/177 (36%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Frame = -2
Query: 487 MASLVPPFNCPSLH-----QTHTH----QAKNRCPVSFRIQCISAQMTAVIDFEKTQIPG 335
MA LVP F CPS+ ++ +H +K R V FR QC+S Q AVID ++ IP
Sbjct: 1 MACLVPQFKCPSISPEAHFRSVSHLPSLNSKARDSVCFRSQCVSTQTAAVIDIQR--IPS 58
Query: 334 LDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXX 176
L+A S+S ++G++GPP KT +ATL E LLTG
Sbjct: 59 LEARSNSLDDTRPLTYVGSVGPPMKTGIEATLATETLLTGEEAVVAAAAAEAVALARAAV 118
Query: 175 XXXXXXAQMKGSDASVKLDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEP 5
AQ+ +D SVKL++ E+F S+ D LERVR EM + + S +TEP
Sbjct: 119 EVAKDAAQIIRNDPSVKLEKSEDFSSEADAFWLERVRHNEMGLIRTTHHSTPTDTEP 175
>ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 [Asparagus officinalis]
Length = 554
Score = 88.2 bits (217), Expect = 3e-17
Identities = 55/139 (39%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Frame = -2
Query: 424 KNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYSSS-------RFLGAIGPPAKTDFKA 266
K R PV R QC+S+ MTAVI+ +KT +P LDA+++S ++GAIGPP+KTD+K
Sbjct: 22 KPRGPVYVRNQCVSSLMTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKT 81
Query: 265 TLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGSDASVKLDRPENFPSKPDM 86
T E LLT AQM D VKL++ ENFPS+ D+
Sbjct: 82 TWHAETLLTREEATIAAAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADI 141
Query: 85 ILLERVRLEEMESLGKAND 29
L+R L E+E L N+
Sbjct: 142 RQLKRPTLTELELLDTTNN 160
>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
emb|CBI40014.3| unnamed protein product, partial [Vitis vinifera]
Length = 575
Score = 78.2 bits (191), Expect = 1e-13
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Frame = -2
Query: 487 MASLVPPFNCP----SLHQTHTHQAKNRCPVSFRIQC--------ISAQMTAVIDFEKTQ 344
M+ L+P F CP S H +KNR + FR+QC +S TAV+D EK +
Sbjct: 1 MSCLLPQFKCPPDTFSTHPKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKLR 60
Query: 343 IPGLDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXX 185
+P L+++S+S ++G +GPP + +F+ATL RE LLT
Sbjct: 61 LPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAK 120
Query: 184 XXXXXXXXXAQMKGSDASVKLD-RPENFPSKPDMILLERVRLEEMESLGKANDSAIPET 11
A++ G + S K + +P +F S D R++ E E +G DS ET
Sbjct: 121 AAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAET 179
>ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
subsp. malaccensis]
Length = 567
Score = 76.6 bits (187), Expect = 3e-13
Identities = 61/175 (34%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Frame = -2
Query: 487 MASLVPPFNCPSLHQTHTHQAKNRCP-----VSFRIQCISAQMTAVIDFEKTQIPGLDAY 323
MA LVP F PS + P V FR +C+ + TAVIDFE QIP L+A+
Sbjct: 1 MACLVPQFKPPSSDSLARPSLPSLHPRAREFVCFRSRCVLSPTTAVIDFE--QIPKLEAH 58
Query: 322 SSSR---------FLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXX 170
S+S + G++GPP KT +ATL E LL
Sbjct: 59 STSSSTCAIRPLTYSGSVGPPIKTSIEATLASETLLQCDEAVIAAAAAEAVALARAALEL 118
Query: 169 XXXXAQMKGSDASVKLDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEP 5
AQM G + S ++++ E PS+ D+ LERV L E E G N A ET P
Sbjct: 119 AKDAAQMIGKNLSAEVEKLEETPSEADIKWLERVSLTETEWAGFTNHPAATETIP 173
>ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 [Asparagus officinalis]
Length = 517
Score = 74.7 bits (182), Expect = 2e-12
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Frame = -2
Query: 376 MTAVIDFEKTQIPGLDAYSSSR-------FLGAIGPPAKTDFKATLPREVLLTGXXXXXX 218
MTAVI+ +KT +P LDA+++S ++GAIGPP+KTD+K T E LLT
Sbjct: 1 MTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIA 60
Query: 217 XXXXXXXXXXXXXXXXXXXXAQMKGSDASVKLDRPENFPSKPDMILLERVRLEEMESLGK 38
AQM D VKL++ ENFPS+ D+ L+R L E+E L
Sbjct: 61 AAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDT 120
Query: 37 AND 29
N+
Sbjct: 121 TNN 123
>ref|XP_011623893.1| RNA polymerase sigma factor sigB [Amborella trichopoda]
Length = 563
Score = 73.9 bits (180), Expect = 3e-12
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Frame = -2
Query: 487 MASLVPPFNCPSLHQTHTHQAKNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYSSS-- 314
MA ++P F + ++ + + R F+ QC+S+ T V+D +K ++P L +S+S
Sbjct: 1 MACMLPQFI--HIRTSYHNNLRTREATCFQTQCVSSTATVVVDVDKVRVPSLGGHSTSVS 58
Query: 313 -----RFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXXAQM 149
++G IG KTDF+A L E LL A M
Sbjct: 59 THGPLTYVGTIGSQKKTDFEAALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALM 118
Query: 148 KGSDASVKLDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEP 5
GS + D+ ++FPS+ D++ L+R RL EME +G + S+I P
Sbjct: 119 VGSVPPSRSDKVDDFPSEADILRLQRARLTEMERIGSMDGSSIAGIGP 166
>ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis
guineensis]
Length = 555
Score = 72.8 bits (177), Expect = 7e-12
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Frame = -2
Query: 487 MASLVPPFNCPSLH-----QTHTHQ----AKNRCPVSFRIQCISAQMTAVIDFEKTQIPG 335
MA LVP F CPS+ ++ +H +K R V FR QC+S AVID E I
Sbjct: 1 MACLVPQFKCPSMSSDAHFRSLSHHPSLNSKARDSVCFRSQCVSTPTAAVIDME--HILS 58
Query: 334 LDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXX 176
L+A S+S ++GAIGPP KT+ +ATL E LLTG
Sbjct: 59 LEARSTSLAATRPLTYVGAIGPPTKTNMEATLATEALLTGEEAIIAAAAAEAVALARTAV 118
Query: 175 XXXXXXAQMKGSDASVKLDRPENFPSKPDMILLER 71
A +D SVKL++ +F S+ D++ LER
Sbjct: 119 EAAKDAALTIANDPSVKLEKSLDFSSEADILQLER 153
>gb|ERM94758.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
Length = 570
Score = 70.9 bits (172), Expect = 3e-11
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Frame = -2
Query: 424 KNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYSSS-------RFLGAIGPPAKTDFKA 266
+ R F+ QC+S+ T V+D +K ++P L +S+S ++G IG KTDF+A
Sbjct: 27 RTREATCFQTQCVSSTATVVVDVDKVRVPSLGGHSTSVSTHGPLTYVGTIGSQKKTDFEA 86
Query: 265 TLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXXAQMKGSDASVKLDRPENFPSKPDM 86
L E LL A M GS + D+ ++FPS+ D+
Sbjct: 87 ALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSDKVDDFPSEADI 146
Query: 85 ILLERVRLEEMESLGKANDSAIPETEP 5
+ L+R RL EME +G + S+I P
Sbjct: 147 LRLQRARLTEMERIGSMDGSSIAGIGP 173
>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
Length = 572
Score = 67.0 bits (162), Expect = 7e-10
Identities = 59/187 (31%), Positives = 83/187 (44%), Gaps = 26/187 (13%)
Frame = -2
Query: 487 MASLVPPFNCP----SLH-QTHTHQ--------AKNRCPVSFRIQCISAQMTA-----VI 362
MA L+P F C S+H +TH HQ K R + FR QCI + TA V+
Sbjct: 1 MACLLPQFKCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMTTTVV 60
Query: 361 DFEKTQIPGLDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXX 203
D EK ++P L+A+ S ++GAI PP K F+ATL E L+TG
Sbjct: 61 DDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAAVE 120
Query: 202 XXXXXXXXXXXXXXXAQMKGSDASVKLDR-PENFPSKPDMILLERVRLEEMESLGKANDS 26
A M ++ S K D+ P + PS+ D E +L E+E + + S
Sbjct: 121 AVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVHHS 180
Query: 25 AIPETEP 5
E+ P
Sbjct: 181 LGAESRP 187
>gb|OVA12049.1| RNA polymerase sigma-70 [Macleaya cordata]
Length = 574
Score = 66.2 bits (160), Expect = 1e-09
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Frame = -2
Query: 487 MASLVPPFNCPS-------LHQTHTHQAKNRCPVSFRIQCI----SAQMTAVIDFEKTQI 341
MA L+P F CP TH++ K R PV FR QC+ A + V+D EK Q+
Sbjct: 1 MACLLPQFKCPPDTLSILPTPHTHSYLLKTRQPVCFRAQCLLTTTMAMTSTVVDMEKLQL 60
Query: 340 PGLDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXX 182
P L+A+ S ++G+IGPP K +F+ TL + LT
Sbjct: 61 PSLEAHLHSVATDRSLAYIGSIGPPTKANFRETLATDT-LTSEEAVIAAAAAEAVALAKA 119
Query: 181 XXXXXXXXAQMKGSDASVKLD-RPENFPSKPDMILLERVRLEEME-SLG 41
A M G + S K D +P +F ++ + + E R +M+ SLG
Sbjct: 120 AVEVAKDAALMGGYNTSAKSDHKPADFSAQTENVQFETARHTDMDRSLG 168
>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1
[Nelumbo nucifera]
Length = 584
Score = 64.7 bits (156), Expect = 5e-09
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Frame = -2
Query: 487 MASLVPPFNCP----SLH------QTHTHQ------AKNRCPVSFRIQCI-----SAQMT 371
MA L+P F C S+H Q H H +K+R +SF+ QC+ +A T
Sbjct: 1 MACLLPQFKCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAMTT 60
Query: 370 AVIDFEKTQIPGLDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXX 212
++D EK ++P L+++S S ++GA GPP K F+ATL E L+TG
Sbjct: 61 TLVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAAA 120
Query: 211 XXXXXXXXXXXXXXXXXXAQMKGSDASVKLDR-PENFPSKPDMILLERVRLEEMESLGKA 35
A M +S + + P +F S+ + LE+ +L E + +G+
Sbjct: 121 AAEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGRI 180
Query: 34 NDS 26
+ S
Sbjct: 181 DHS 183
>ref|XP_009409922.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
subsp. malaccensis]
Length = 560
Score = 62.4 bits (150), Expect = 3e-08
Identities = 56/169 (33%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Frame = -2
Query: 487 MASLVPPFNCPSLHQTHTHQAKN------RCPVSFRIQCISAQMTAVIDFEKTQIPGLDA 326
MA L P F P H + N R VS R QCI + TAVI+ E QIP L+A
Sbjct: 1 MACLAPQFKWPPSSDAHFRPSLNSIHPRARDSVSSRSQCIISPATAVIEIE--QIPTLEA 58
Query: 325 YSSS-----RFLGAIGPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXX 161
+S+ ++ A+GPP K ATL E LLT
Sbjct: 59 HSTDAIRPLKYTAAVGPPKKASTIATLTPETLLTDEESLIAAAAAEAVALARAAVEIARD 118
Query: 160 XAQMKGSDASVKLDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPE 14
AQ + + D+ +F S+ +M LERVR E ES+ K S I E
Sbjct: 119 AAQKIRKNPFTESDKLNHFTSEANMHRLERVRFTETESI-KVMSSLIAE 166
>ref|XP_017627350.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium arboreum]
gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 578
Score = 59.7 bits (143), Expect = 3e-07
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Frame = -2
Query: 487 MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI-------SAQMTAVIDFEKT 347
M+ L+P F C H+H +K++ + FR QC+ S TAV+D EK
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSTATTAVLDVEKL 60
Query: 346 QIPGLDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLT 239
++P +A+S+S + GA GPP++ F ATL E LLT
Sbjct: 61 RLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLT 103
>gb|KJB46068.1| hypothetical protein B456_007G347300 [Gossypium raimondii]
Length = 373
Score = 59.3 bits (142), Expect = 3e-07
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Frame = -2
Query: 487 MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI-------SAQMTAVIDFEKT 347
M+ L+P F C H+H +K++ + FR QC+ S TAV+D EK
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKL 60
Query: 346 QIPGLDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLT 239
++P +A+S+S + GA GPP++ F ATL E LLT
Sbjct: 61 RLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLT 103
>gb|KJB46069.1| hypothetical protein B456_007G347300 [Gossypium raimondii]
Length = 498
Score = 59.3 bits (142), Expect = 3e-07
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Frame = -2
Query: 487 MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI-------SAQMTAVIDFEKT 347
M+ L+P F C H+H +K++ + FR QC+ S TAV+D EK
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKL 60
Query: 346 QIPGLDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLT 239
++P +A+S+S + GA GPP++ F ATL E LLT
Sbjct: 61 RLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLT 103
>gb|KJB46073.1| hypothetical protein B456_007G347300 [Gossypium raimondii]
Length = 560
Score = 59.3 bits (142), Expect = 3e-07
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Frame = -2
Query: 487 MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI-------SAQMTAVIDFEKT 347
M+ L+P F C H+H +K++ + FR QC+ S TAV+D EK
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKL 60
Query: 346 QIPGLDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLT 239
++P +A+S+S + GA GPP++ F ATL E LLT
Sbjct: 61 RLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLT 103
>ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium raimondii]
gb|KJB46070.1| hypothetical protein B456_007G347300 [Gossypium raimondii]
Length = 578
Score = 59.3 bits (142), Expect = 3e-07
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Frame = -2
Query: 487 MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI-------SAQMTAVIDFEKT 347
M+ L+P F C H+H +K++ + FR QC+ S TAV+D EK
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKL 60
Query: 346 QIPGLDAYSSS-------RFLGAIGPPAKTDFKATLPREVLLT 239
++P +A+S+S + GA GPP++ F ATL E LLT
Sbjct: 61 RLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLT 103