BLASTX nr result
ID: Ophiopogon24_contig00027094
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00027094
(645 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020242128.1| pentatricopeptide repeat-containing protein ... 137 9e-34
ref|XP_008778026.1| PREDICTED: pentatricopeptide repeat-containi... 103 1e-21
ref|XP_020688145.1| pentatricopeptide repeat-containing protein ... 101 5e-21
gb|PKU85538.1| Pentatricopeptide repeat-containing protein [Dend... 100 8e-21
ref|XP_020590639.1| pentatricopeptide repeat-containing protein ... 99 4e-20
ref|XP_010932857.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 97 1e-19
ref|XP_020104923.1| pentatricopeptide repeat-containing protein ... 96 2e-19
gb|OAY80932.1| Pentatricopeptide repeat-containing protein [Anan... 96 3e-19
gb|PKA58299.1| Pentatricopeptide repeat-containing protein [Apos... 91 1e-17
gb|OVA09862.1| Pentatricopeptide repeat [Macleaya cordata] 87 5e-16
ref|XP_009415277.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-16
gb|KVH88798.1| Pentatricopeptide repeat-containing protein [Cyna... 80 1e-13
ref|XP_022874238.1| pentatricopeptide repeat-containing protein ... 77 7e-13
ref|XP_006362174.1| PREDICTED: pentatricopeptide repeat-containi... 76 2e-12
ref|XP_015087256.1| PREDICTED: pentatricopeptide repeat-containi... 76 2e-12
ref|XP_004247685.1| PREDICTED: pentatricopeptide repeat-containi... 76 2e-12
ref|XP_011073479.1| LOW QUALITY PROTEIN: pentatricopeptide repea... 75 5e-12
ref|XP_010246343.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_008384771.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_009337285.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 75 7e-12
>ref|XP_020242128.1| pentatricopeptide repeat-containing protein At3g23020 [Asparagus
officinalis]
ref|XP_020242129.1| pentatricopeptide repeat-containing protein At3g23020 [Asparagus
officinalis]
gb|ONK60598.1| uncharacterized protein A4U43_C08F20310 [Asparagus officinalis]
Length = 804
Score = 137 bits (346), Expect = 9e-34
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GRMKEAVLNF+QML SGVQPND TFRLLG VLLKRGAS +AIKHLE +RKNNAH+GLHEW
Sbjct: 709 GRMKEAVLNFRQMLASGVQPNDATFRLLGDVLLKRGASVKAIKHLELLRKNNAHSGLHEW 768
Query: 465 VKALCSIVKLSHTFPKFGSKLKG 397
VKALC++V+L H PKFG L G
Sbjct: 769 VKALCAVVRLEHNLPKFGGTLNG 791
>ref|XP_008778026.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Phoenix dactylifera]
Length = 835
Score = 103 bits (256), Expect = 1e-21
Identities = 50/83 (60%), Positives = 59/83 (71%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GRMKEAV FQ ML SGV PND TFR LGV+LLK G S++AI HLE VRK + H G EW
Sbjct: 723 GRMKEAVKAFQHMLASGVPPNDATFRSLGVILLKHGVSRDAINHLELVRKKDVHIGSLEW 782
Query: 465 VKALCSIVKLSHTFPKFGSKLKG 397
++ LCSIV+L +T + K KG
Sbjct: 783 IETLCSIVRLDYTILQLDDKTKG 805
>ref|XP_020688145.1| pentatricopeptide repeat-containing protein At3g23020 [Dendrobium
catenatum]
Length = 834
Score = 101 bits (251), Expect = 5e-21
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GRMKEA+ FQQML+ G++P+D TF+ LG++LLKRG SKEAIK LE VR+ ++ GL EW
Sbjct: 722 GRMKEALKTFQQMLSIGIKPDDATFKSLGIILLKRGVSKEAIKRLEKVREKDSLGGLQEW 781
Query: 465 VKALCSIVKLSHTFPKFGSKLK 400
VKA+CS+V+L TF F K
Sbjct: 782 VKAMCSMVRLDETFTGFDGNKK 803
>gb|PKU85538.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 802
Score = 100 bits (249), Expect = 8e-21
Identities = 47/77 (61%), Positives = 61/77 (79%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GRMKEA+ FQQML+ G++P+D TF+ LG++LLKRG SKEAIK LE VR+ ++ GL EW
Sbjct: 645 GRMKEALKTFQQMLSIGIKPDDATFKSLGIILLKRGVSKEAIKRLEKVREKDSLGGLQEW 704
Query: 465 VKALCSIVKLSHTFPKF 415
VKA+CS+V+L TF F
Sbjct: 705 VKAMCSMVRLDETFTGF 721
>ref|XP_020590639.1| pentatricopeptide repeat-containing protein At3g23020 [Phalaenopsis
equestris]
Length = 834
Score = 98.6 bits (244), Expect = 4e-20
Identities = 48/83 (57%), Positives = 61/83 (73%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GRMKEA+ FQQML G++P+D FR LG+++LKRGASKEAIK L+ VR+ +A GL EW
Sbjct: 722 GRMKEALKTFQQMLAKGIKPDDAIFRSLGIIMLKRGASKEAIKRLKKVRERDALGGLQEW 781
Query: 465 VKALCSIVKLSHTFPKFGSKLKG 397
VKA+CS+V L TF + KG
Sbjct: 782 VKAMCSMVMLDETFNGHNVEEKG 804
>ref|XP_010932857.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020 [Elaeis guineensis]
Length = 836
Score = 97.4 bits (241), Expect = 1e-19
Identities = 47/82 (57%), Positives = 56/82 (68%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GRMKE V FQ ML S V PND TF+ LGV+LLK G S++AI HLE VRK + H G EW
Sbjct: 723 GRMKEVVKAFQHMLASHVPPNDATFKSLGVILLKHGVSRDAINHLELVRKKDVHIGSLEW 782
Query: 465 VKALCSIVKLSHTFPKFGSKLK 400
+K LCSI++L +T K K K
Sbjct: 783 IKTLCSIIRLDYTVLKLDDKTK 804
>ref|XP_020104923.1| pentatricopeptide repeat-containing protein At3g23020 [Ananas
comosus]
Length = 823
Score = 96.3 bits (238), Expect = 2e-19
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GRMKEAV FQQML SGV+PND TF+ LG++L+KRGA AI+HLE VR+N+A GL EW
Sbjct: 715 GRMKEAVKCFQQMLASGVKPNDATFKTLGLILIKRGAPSSAIEHLEMVRRNDAQVGLKEW 774
Query: 465 VKALCSIVKLSHTFPKFGSKLKG 397
+KAL ++V+ + G L G
Sbjct: 775 IKALRALVRFDDSNLTIGGMLMG 797
>gb|OAY80932.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 741
Score = 95.9 bits (237), Expect = 3e-19
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GRMKEAV FQQML SGV+PND TF+ LG++L+KRGA AI+HLE VR+N+A GL EW
Sbjct: 633 GRMKEAVKCFQQMLASGVKPNDATFKTLGLILIKRGAPSSAIEHLEKVRRNDAQVGLKEW 692
Query: 465 VKALCSIVKLSHTFPKFGSKLKG 397
+KAL ++V+ + G L G
Sbjct: 693 IKALLALVRFDDSNLTIGGMLMG 715
>gb|PKA58299.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 826
Score = 91.3 bits (225), Expect = 1e-17
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR++EA QQML +QPND TFR LGVV+LK+GASKEAIK LE +R+ N+ GL+EW
Sbjct: 719 GRIREAFETLQQMLALSIQPNDATFRSLGVVMLKKGASKEAIKLLEKIREENSQCGLNEW 778
Query: 465 VKALCSIVKLSHTFPKFGSKLK 400
A+CS+++L + F +K K
Sbjct: 779 FNAMCSMLRLDENYTGFCAKEK 800
>gb|OVA09862.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 878
Score = 86.7 bits (213), Expect = 5e-16
Identities = 41/68 (60%), Positives = 53/68 (77%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR+KEAV F++M+ S +QP+D TFR LGVVL+K GASKEA+ LE VR+ +A +GLH W
Sbjct: 780 GRLKEAVETFREMIKSSIQPDDYTFRSLGVVLVKCGASKEAVSKLEVVRRKDALSGLHAW 839
Query: 465 VKALCSIV 442
V LCSI+
Sbjct: 840 VSTLCSII 847
>ref|XP_009415277.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Musa acuminata subsp. malaccensis]
Length = 825
Score = 86.3 bits (212), Expect = 7e-16
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR KEAV F+ ML SG+ P+DGTF+ LG+VLL+ G SKEAI LE VR +A GL EW
Sbjct: 714 GRTKEAVETFRYMLASGIPPDDGTFKTLGLVLLRHGVSKEAINQLESVRGEDAEVGLEEW 773
Query: 465 VKALCSIVK 439
+KA+CS+++
Sbjct: 774 IKAICSVLR 782
>gb|KVH88798.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus var.
scolymus]
Length = 879
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/70 (57%), Positives = 51/70 (72%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR KEAV F+QM+ SGVQPND TF+ LGVVL+KRG SK+A+ +LE + K + +GL W
Sbjct: 802 GRFKEAVTIFKQMIESGVQPNDSTFKSLGVVLMKRGVSKKAVANLEVMWKRDHQSGLEAW 861
Query: 465 VKALCSIVKL 436
+ L SIV L
Sbjct: 862 LATLDSIVGL 871
>ref|XP_022874238.1| pentatricopeptide repeat-containing protein At3g23020, partial
[Olea europaea var. sylvestris]
Length = 556
Score = 77.4 bits (189), Expect = 7e-13
Identities = 34/72 (47%), Positives = 48/72 (66%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR KEA F +ML S VQP+D TF+ LG++LLK G K+A++ LE RK +A +GL W
Sbjct: 476 GRFKEAAATFDEMLRSAVQPDDSTFKSLGIILLKCGVPKDALRKLELTRKKDAQSGLQAW 535
Query: 465 VKALCSIVKLSH 430
LCS++ + +
Sbjct: 536 NSTLCSVIGMDN 547
>ref|XP_006362174.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Solanum tuberosum]
ref|XP_015158357.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Solanum tuberosum]
Length = 959
Score = 76.3 bits (186), Expect = 2e-12
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR KEA+ +++ML+S +QP+D TF+ LG+VLLK G KEAI LE +RK + +G+ EW
Sbjct: 879 GRYKEALATYKEMLSSAIQPDDSTFKSLGIVLLKCGVPKEAISKLESMRKKDPQSGVQEW 938
Query: 465 VKALCSIVKLSHT 427
AL S++ + T
Sbjct: 939 TSALSSVIGVLDT 951
>ref|XP_015087256.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Solanum pennellii]
Length = 966
Score = 76.3 bits (186), Expect = 2e-12
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR KEA+ +++ML+S +QP+D TF+ LG+VLLK G KEAI LE +RK + +G+ EW
Sbjct: 886 GRYKEALATYKEMLSSAIQPDDSTFKSLGIVLLKCGVPKEAISKLESMRKKDPQSGVQEW 945
Query: 465 VKALCSIVKLSHT 427
AL S++ + T
Sbjct: 946 TSALSSVIGVLDT 958
>ref|XP_004247685.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Solanum lycopersicum]
Length = 966
Score = 76.3 bits (186), Expect = 2e-12
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR KEA+ +++ML+S +QP+D TF+ LG+VLLK G KEAI LE +RK + +G+ EW
Sbjct: 886 GRYKEALATYKEMLSSAIQPDDSTFKSLGIVLLKCGVPKEAINKLESMRKKDPQSGVQEW 945
Query: 465 VKALCSIVKLSHT 427
AL S++ + T
Sbjct: 946 TSALSSVIGVLDT 958
>ref|XP_011073479.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
At3g23020 [Sesamum indicum]
Length = 932
Score = 75.1 bits (183), Expect = 5e-12
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR KEAV F +ML S +QP+D TF+ LG++LLK G K AI+ LE +RK N GL W
Sbjct: 854 GRYKEAVATFDEMLKSLIQPDDSTFKSLGIILLKCGVPKNAIEKLELIRKENTERGLQAW 913
Query: 465 VKALCSIVKL 436
L S+V +
Sbjct: 914 TSTLSSVVDM 923
>ref|XP_010246343.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Nelumbo nucifera]
Length = 866
Score = 74.7 bits (182), Expect = 7e-12
Identities = 37/68 (54%), Positives = 48/68 (70%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR+KEAV FQ+M+ SG+QP+D TF+LLG VL+K G SK AI LE R + H+GL W
Sbjct: 785 GRLKEAVETFQEMMKSGIQPDDYTFKLLGSVLVKCGVSKGAISKLEETRVTDGHHGLRAW 844
Query: 465 VKALCSIV 442
+ L S+V
Sbjct: 845 MTTLYSMV 852
>ref|XP_008384771.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Malus domestica]
Length = 868
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/73 (46%), Positives = 51/73 (69%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR KE V F++M+ + VQP+D TF+ LG+VL+K G SK+A+ +LE K +A GL W
Sbjct: 793 GRFKEVVATFKEMIKASVQPDDHTFKSLGIVLVKSGISKQAVGNLEVSVKKDAQRGLRAW 852
Query: 465 VKALCSIVKLSHT 427
+ AL S+V+L+ +
Sbjct: 853 ISALSSVVRLNES 865
>ref|XP_009337285.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020 [Pyrus x bretschneideri]
Length = 876
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/73 (46%), Positives = 52/73 (71%)
Frame = -1
Query: 645 GRMKEAVLNFQQMLTSGVQPNDGTFRLLGVVLLKRGASKEAIKHLEFVRKNNAHNGLHEW 466
GR KE V F++M+ + VQP+D TF+ LG+VL+K G SK+A+ +LE K +A +GL W
Sbjct: 801 GRFKEVVATFKEMIKASVQPDDCTFKSLGIVLVKSGISKQAVGNLEVSVKKDAQSGLRAW 860
Query: 465 VKALCSIVKLSHT 427
+ AL S+V+L+ +
Sbjct: 861 ISALSSVVRLNES 873