BLASTX nr result

ID: Ophiopogon24_contig00027008 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00027008
         (501 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK58732.1| uncharacterized protein A4U43_C09F16090 [Asparagu...    61   5e-08
ref|XP_020245453.1| LOW QUALITY PROTEIN: U-box domain-containing...    61   7e-08

>gb|ONK58732.1| uncharacterized protein A4U43_C09F16090 [Asparagus officinalis]
          Length = 292

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   LTPNHLVSSMISQWCSEHGFALPTPC-INHPDNPPIPASKMNSALDGTTITNVSLSTPQC 178
           LTPNHLV SMISQWC EH   LP P  I++PD+PPI AS+  S    + + N  LS+P  
Sbjct: 41  LTPNHLVRSMISQWCMEHNIPLPPPSPISNPDDPPISASERTSV--SSLLKN--LSSPSL 96

Query: 179 PAPSTSI 199
           P    ++
Sbjct: 97  PIKKQAV 103


>ref|XP_020245453.1| LOW QUALITY PROTEIN: U-box domain-containing protein 9-like
           [Asparagus officinalis]
          Length = 449

 Score = 61.2 bits (147), Expect = 7e-08
 Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   LTPNHLVSSMISQWCSEHGFALPTPC-INHPDNPPIPASKMNSALDGTTITNVSLSTPQC 178
           LTPNHLV SMISQWC EH   LP P  I++PD+PPI AS+  S    + + N  LS+P  
Sbjct: 124 LTPNHLVRSMISQWCMEHNIPLPPPSPISNPDDPPISASERTSV--SSLLKN--LSSPSL 179

Query: 179 PAPSTSI 199
           P    ++
Sbjct: 180 PIKKQAV 186


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