BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00026968
         (401 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera]    54   9e-07
ref|WP_091224524.1| ribonuclease H [Paenibacillus sp. BC26] >gi|...    54   4e-06
ref|WP_090982637.1| ribonuclease H [Paenibacillus sp. CF384] >gi...    54   4e-06
ref|WP_049931734.1| hypothetical protein [Lachnospiraceae bacter...    54   8e-06

>emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera]
          Length = 118

 Score = 54.3 bits (129), Expect = 9e-07
 Identities = 23/50 (46%), Positives = 32/50 (64%)
 Frame = -3

Query: 150 HHDIVQVLQGGMSFFYVVFVGRRPGVYSNWPECNAQVSGYKKAVCQRYNT 1
           H D+  +L+     +YVVF GR+ G+Y++WPEC  QV GYK  V + Y T
Sbjct: 17  HVDVKGLLRMANDVYYVVFAGRKKGIYNSWPECQEQVVGYKGNVYKLYKT 66


>ref|WP_091224524.1| ribonuclease H [Paenibacillus sp. BC26]
 emb|SFT21548.1| ribonuclease HI [Paenibacillus sp. BC26]
          Length = 219

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 27/36 (75%)
 Frame = -3

Query: 108 FYVVFVGRRPGVYSNWPECNAQVSGYKKAVCQRYNT 1
           FYVV+VGR+PGVYSNW EC AQ SG+  A  + Y T
Sbjct: 6   FYVVWVGRKPGVYSNWSECQAQTSGFDDAKFKSYET 41


>ref|WP_090982637.1| ribonuclease H [Paenibacillus sp. CF384]
 emb|SDX33509.1| ribonuclease HI [Paenibacillus sp. CF384]
          Length = 219

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 27/36 (75%)
 Frame = -3

Query: 108 FYVVFVGRRPGVYSNWPECNAQVSGYKKAVCQRYNT 1
           FYVV+VGR+PGVYSNW EC AQ SG+  A  + Y T
Sbjct: 6   FYVVWVGRKPGVYSNWSECQAQTSGFDDAKFKSYET 41


>ref|WP_049931734.1| hypothetical protein [Lachnospiraceae bacterium JC7]
 gb|ETP73967.1| putative double-stranded RNA/RNA-DNA hybrid binding protein
           [Lachnospiraceae bacterium JC7]
          Length = 257

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 22/39 (56%), Positives = 30/39 (76%)
 Frame = -3

Query: 117 MSFFYVVFVGRRPGVYSNWPECNAQVSGYKKAVCQRYNT 1
           M+FFY V  G++PGVYSNW +C AQV GY  AV ++++T
Sbjct: 1   MAFFYAVQKGKKPGVYSNWNDCKAQVMGYPGAVYKKFST 39