BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00026892
         (417 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018848712.1| PREDICTED: uncharacterized protein LOC109011...   182   9e-55
gb|PNY01218.1| hypothetical protein L195_g024508 [Trifolium prat...   192   5e-54
gb|KYP39292.1| Retrovirus-related Pol polyprotein from transposo...   176   3e-50
gb|KYP64439.1| Retrovirus-related Pol polyprotein from transposo...   176   2e-48
emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]   171   2e-46
gb|KYP34930.1| Retrovirus-related Pol polyprotein from transposo...   157   2e-46
emb|CAN65966.1| hypothetical protein VITISV_005935 [Vitis vinifera]   169   4e-46
gb|PNX74724.1| gag-pol polyprotein, partial [Trifolium pratense]      168   9e-46
emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]   167   3e-45
emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera]   164   1e-44
ref|XP_022889208.1| uncharacterized protein LOC111404668 [Olea e...   162   2e-44
emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M...   155   1e-42
emb|CAN78945.1| hypothetical protein VITISV_036903 [Vitis vinifera]   154   1e-40
emb|CAN78557.1| hypothetical protein VITISV_010019 [Vitis vinifera]   153   3e-40
gb|KYP70738.1| Retrovirus-related Pol polyprotein from transposo...   146   6e-39
ref|XP_008377550.1| PREDICTED: uncharacterized protein LOC103440...   148   1e-38
gb|KYP76234.1| Retrovirus-related Pol polyprotein from transposo...   140   1e-37
ref|XP_021819415.1| uncharacterized protein LOC110761277 [Prunus...   141   6e-37
gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinen...   141   1e-36
gb|PRQ42978.1| putative RNA-directed DNA polymerase [Rosa chinen...   140   2e-36

>ref|XP_018848712.1| PREDICTED: uncharacterized protein LOC109011807 isoform X4 [Juglans
           regia]
          Length = 274

 Score =  182 bits (461), Expect = 9e-55
 Identities = 81/115 (70%), Positives = 94/115 (81%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSGKQRQVWLWHRRLGHPSFSYLKHL 220
           +DILTKEIIGRGTKRGGLYY+DDF   +AN M  +  K+RQ+WLWHRRLGHPSFSYLK L
Sbjct: 31  QDILTKEIIGRGTKRGGLYYMDDFDFSQANTMLRTDDKERQIWLWHRRLGHPSFSYLKRL 90

Query: 219 LPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTS 55
            P LFS LH+S+F+C+ CILAKSH  SYP+S  K +TPF LIHSDVWGP+PI  S
Sbjct: 91  FPSLFSNLHESDFRCETCILAKSHCASYPISLKKCETPFTLIHSDVWGPAPILVS 145


>gb|PNY01218.1| hypothetical protein L195_g024508 [Trifolium pratense]
          Length = 1024

 Score =  192 bits (487), Expect = 5e-54
 Identities = 91/115 (79%), Positives = 102/115 (88%), Gaps = 1/115 (0%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSG-KQRQVWLWHRRLGHPSFSYLKH 223
           +DILTKEIIGRGTK+GGLYY+DDFSTG+ANNM++S G K +Q+ LWHRRLGHPSF+YLKH
Sbjct: 506 QDILTKEIIGRGTKKGGLYYMDDFSTGRANNMQNSLGVKHKQILLWHRRLGHPSFNYLKH 565

Query: 222 LLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPIST 58
           LLP+LFS LH S  KC+ CILAKSHRV Y  SSNKSDTPF LIHSDVWGPSPIST
Sbjct: 566 LLPNLFSGLHVSELKCNICILAKSHRVPYLSSSNKSDTPFTLIHSDVWGPSPIST 620


>gb|KYP39292.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 487

 Score =  176 bits (446), Expect = 3e-50
 Identities = 83/119 (69%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSG-KQRQVWLWHRRLGHPSFSYLKH 223
           ++ILTKEIIGRGTKRGGLYY++DFS GKA++M H S  K+ Q+ LWHRRLGHPSF YLKH
Sbjct: 105 QNILTKEIIGRGTKRGGLYYMEDFSVGKAHHMYHPSNIKREQILLWHRRLGHPSFEYLKH 164

Query: 222 LLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTSPAF 46
           + P LFS+    N KC+ CILAKSHR  +PLS NKSD PFALIHSDVWGPSP S+S  F
Sbjct: 165 VFPSLFSDTSLLNLKCETCILAKSHRTHFPLSMNKSDVPFALIHSDVWGPSPKSSSLGF 223


>gb|KYP64439.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1158

 Score =  176 bits (446), Expect = 2e-48
 Identities = 83/119 (69%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSG-KQRQVWLWHRRLGHPSFSYLKH 223
           ++ILTKEIIGRGTKRGGLYY++DFS GKA++M H S  K+ Q+ LWHRRLGHPSF YLKH
Sbjct: 387 QNILTKEIIGRGTKRGGLYYMEDFSVGKAHHMYHPSNIKREQILLWHRRLGHPSFEYLKH 446

Query: 222 LLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTSPAF 46
           + P LFS+    N KC+ CILAKSHR  +PLS NKSD PFALIHSDVWGPSP S+S  F
Sbjct: 447 VFPSLFSDTSLLNLKCETCILAKSHRTHFPLSMNKSDVPFALIHSDVWGPSPKSSSLGF 505


>emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
          Length = 1409

 Score =  171 bits (432), Expect(2) = 2e-46
 Identities = 76/114 (66%), Positives = 94/114 (82%)
 Frame = -1

Query: 396 DILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSGKQRQVWLWHRRLGHPSFSYLKHLL 217
           DILTKEIIGRGTKR GLYY+DDFS G+ANNM  +  K+RQ+WLWH RLGHPSF YL+ L 
Sbjct: 419 DILTKEIIGRGTKREGLYYMDDFSYGRANNMHSAGVKERQIWLWHNRLGHPSFRYLRCLF 478

Query: 216 PDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTS 55
            DLF++ ++S+FKC+ACI AKSH+V Y +S NK DT F ++HSDVWGP+PI+ S
Sbjct: 479 LDLFTKFNESDFKCEACIQAKSHQVPYSISLNKCDTXFLIVHSDVWGPAPITIS 532



 Score = 43.1 bits (100), Expect(2) = 2e-46
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -3

Query: 55  SGIRWFVTFVDDCTRMTW 2
           S +RWFVTFVDDCTRMTW
Sbjct: 533 SSVRWFVTFVDDCTRMTW 550


>gb|KYP34930.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 162

 Score =  157 bits (396), Expect = 2e-46
 Identities = 77/119 (64%), Positives = 89/119 (74%), Gaps = 1/119 (0%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSG-KQRQVWLWHRRLGHPSFSYLKH 223
           ++IL KEIIG G    GLYY++DFS GKA+ M H S  K+ Q+ LWHRRLGHPSF YLKH
Sbjct: 12  QNILIKEIIGHG----GLYYMEDFSVGKAHYMYHPSNIKREQILLWHRRLGHPSFEYLKH 67

Query: 222 LLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTSPAF 46
           + P LFS+    N KC+ CILAKSHR  +PLS NKSD PFALIHSDVWGPSP S+S  F
Sbjct: 68  VFPSLFSDTSLLNLKCETCILAKSHRTHFPLSMNKSDVPFALIHSDVWGPSPKSSSLGF 126


>emb|CAN65966.1| hypothetical protein VITISV_005935 [Vitis vinifera]
          Length = 1154

 Score =  169 bits (427), Expect(2) = 4e-46
 Identities = 75/115 (65%), Positives = 92/115 (80%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSGKQRQVWLWHRRLGHPSFSYLKHL 220
           +DILTKEIIGRGTKR GLYY+DDFS  +ANNM  +  K+RQ+WLWH +LGHP F YL+ L
Sbjct: 385 QDILTKEIIGRGTKREGLYYMDDFSYDRANNMHSTGVKERQIWLWHNQLGHPLFQYLRCL 444

Query: 219 LPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTS 55
            PDLF + +DS+FKC+ACI AKSH V Y +S NK DTPF ++HSD WGP+PI+ S
Sbjct: 445 FPDLFXKFNDSDFKCEACIQAKSHWVPYSISLNKCDTPFFIVHSDXWGPTPITIS 499



 Score = 43.9 bits (102), Expect(2) = 4e-46
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = -3

Query: 52  GIRWFVTFVDDCTRMTW 2
           G+RWFVTFVDDCTRMTW
Sbjct: 501 GVRWFVTFVDDCTRMTW 517


>gb|PNX74724.1| gag-pol polyprotein, partial [Trifolium pratense]
          Length = 800

 Score =  168 bits (425), Expect = 9e-46
 Identities = 77/116 (66%), Positives = 94/116 (81%), Gaps = 3/116 (2%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSG-KQRQVWLWHRRLGHPSFSYLKH 223
           +DILTKEIIGRGTKRGGLYY++DF++ + +N+ HSSG  +  +WLWH RLGHPSF Y+KH
Sbjct: 151 QDILTKEIIGRGTKRGGLYYMEDFNSSRVHNVRHSSGTNEESIWLWHCRLGHPSFDYMKH 210

Query: 222 LLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDT--PFALIHSDVWGPSPIS 61
           LLP LFS L  S FKCD CILAKSHRV + ++ NKS    PFAL+H+DVWGPSPI+
Sbjct: 211 LLPKLFSGLDQSTFKCDTCILAKSHRVPFSVNLNKSPLGHPFALVHTDVWGPSPIT 266


>emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]
          Length = 1387

 Score =  167 bits (423), Expect = 3e-45
 Identities = 80/115 (69%), Positives = 93/115 (80%), Gaps = 1/115 (0%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSGKQR-QVWLWHRRLGHPSFSYLKH 223
           +DILTKEIIGRGTK+GGLYY++DFS G+AN+   SS + +  + LWHRRLGHPSF YLK 
Sbjct: 471 QDILTKEIIGRGTKKGGLYYMEDFSIGQANHTRSSSDRNKANILLWHRRLGHPSFGYLKL 530

Query: 222 LLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPIST 58
           + P LFS L + +FKC+ CILAKSHRVSYPLS NKS  PF LIHSDVWGPSP ST
Sbjct: 531 VFPALFSGLSNLDFKCETCILAKSHRVSYPLSFNKSQMPFELIHSDVWGPSPKST 585


>emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera]
          Length = 2260

 Score =  164 bits (416), Expect(2) = 1e-44
 Identities = 79/114 (69%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = -1

Query: 396 DILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSGKQR-QVWLWHRRLGHPSFSYLKHL 220
           DILTKEIIGRGTK+GGLYY++DFS  +AN+   SS + +  + LWHRRLGHPSF YLK +
Sbjct: 384 DILTKEIIGRGTKKGGLYYMEDFSIXQANHTRSSSDRNKXNILLWHRRLGHPSFGYLKLV 443

Query: 219 LPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPIST 58
            P LFS L + +FKC+ CILAKSHRVSYPLS NKS  PF LIHSDVWGPSP ST
Sbjct: 444 FPXLFSGLSNLDFKCETCILAKSHRVSYPLSFNKSQMPFELIHSDVWGPSPKST 497



 Score = 43.1 bits (100), Expect(2) = 1e-44
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -3

Query: 55  SGIRWFVTFVDDCTRMTW 2
           SG+RWFV FVDDCTRMTW
Sbjct: 499 SGVRWFVIFVDDCTRMTW 516


>ref|XP_022889208.1| uncharacterized protein LOC111404668 [Olea europaea var.
           sylvestris]
          Length = 609

 Score =  162 bits (411), Expect = 2e-44
 Identities = 79/128 (61%), Positives = 96/128 (75%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSGKQRQVWLWHRRLGHPSFSYLKHL 220
           +DILTKEI+GRGTKRGGLYY+D+FS G A+++  +  +Q Q+WLWHRRLGHP FSYLKHL
Sbjct: 414 QDILTKEILGRGTKRGGLYYMDNFSVGCAHHIRSNENEQ-QIWLWHRRLGHPLFSYLKHL 472

Query: 219 LPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTSPAFVG 40
           LP LFS +  S+FKC+ CILAKS   SY  S NK   PFALIHSDVWGPSP S     +G
Sbjct: 473 LPSLFSNVVLSDFKCNTCILAKSQCASYSQSMNKRSIPFALIHSDVWGPSPNS-----IG 527

Query: 39  L*LLWMIV 16
             + W ++
Sbjct: 528 SKVSWFVI 535


>emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus domestica]
          Length = 1390

 Score =  155 bits (392), Expect(2) = 1e-42
 Identities = 76/119 (63%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
 Frame = -1

Query: 408 TL*KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHS-SGKQRQVWLWHRRLGHPSFSY 232
           TL  DI TKEIIGRGTKR GLYYVDD +TG+A+ +  S S   ++VWL HRRLGH SF Y
Sbjct: 409 TLAPDIQTKEIIGRGTKREGLYYVDDVATGRAHAVRASQSSNLQEVWLLHRRLGHASFGY 468

Query: 231 LKHLLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTS 55
           L+HLLP LFS +++S+  C+ CILAKSHR S+P S NK   PF L+HSDVWGPSPI  S
Sbjct: 469 LRHLLPSLFSGINESDLHCEVCILAKSHRASFPPSMNKRALPFELVHSDVWGPSPIVPS 527



 Score = 45.8 bits (107), Expect(2) = 1e-42
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -3

Query: 55  SGIRWFVTFVDDCTRMTW 2
           SGIRWFVTFVDDCTRMTW
Sbjct: 528 SGIRWFVTFVDDCTRMTW 545


>emb|CAN78945.1| hypothetical protein VITISV_036903 [Vitis vinifera]
          Length = 957

 Score =  154 bits (388), Expect = 1e-40
 Identities = 74/114 (64%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = -1

Query: 396 DILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSGKQR-QVWLWHRRLGHPSFSYLKHL 220
           DILTK+IIGRGTK+GGLYY++DF  G+AN+   SS + +  + LWHR L HPSF YLK +
Sbjct: 235 DILTKKIIGRGTKKGGLYYMEDFGIGRANHTRSSSDRNKTNILLWHRWLXHPSFGYLKLV 294

Query: 219 LPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPIST 58
            P LF  L D +FKC+ CIL KSHRVSYPLS NKS  PF LIHSDVWGP P ST
Sbjct: 295 FPALFLGLSDLDFKCETCILXKSHRVSYPLSFNKSQMPFELIHSDVWGPYPKST 348


>emb|CAN78557.1| hypothetical protein VITISV_010019 [Vitis vinifera]
          Length = 1348

 Score =  153 bits (386), Expect = 3e-40
 Identities = 75/114 (65%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = -1

Query: 396 DILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSGKQR-QVWLWHRRLGHPSFSYLKHL 220
           DILTKEIIGRGTKRGGLYY++DF  G+AN+   SS + +  + LWH RLGH SF YLK +
Sbjct: 352 DILTKEIIGRGTKRGGLYYLEDFGIGRANHTRSSSDRNKVNILLWHHRLGHLSFGYLKLV 411

Query: 219 LPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPIST 58
            P LFS L + +FKC+ CILAKSH VSYPLS NKS  PF LIHSDVWG  P ST
Sbjct: 412 FPALFSGLSNLDFKCETCILAKSHHVSYPLSFNKSQMPFELIHSDVWGLYPKST 465


>gb|KYP70738.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 500

 Score =  146 bits (369), Expect = 6e-39
 Identities = 67/121 (55%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNM-EHSSGKQRQVWLWHRRLGHPSFSYLKH 223
           +DILTKEIIGRGTKRGGLYY++D ++ + NN+ + S+ K+ ++ +WH R+GHPSF Y+KH
Sbjct: 327 QDILTKEIIGRGTKRGGLYYMEDLNSSRVNNVGKASNNKEGEIRVWHARMGHPSFYYMKH 386

Query: 222 LLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTSPAFV 43
           +LP LF+ +  S   CD CI+ KSHRV +P   NK +TPF LIH+DVWGPS +   P+ V
Sbjct: 387 VLPKLFTGVDLSKLTCDTCIVVKSHRVPFPTHLNKINTPFGLIHTDVWGPSSL---PSLV 443

Query: 42  G 40
           G
Sbjct: 444 G 444


>ref|XP_008377550.1| PREDICTED: uncharacterized protein LOC103440632 [Malus domestica]
          Length = 793

 Score =  148 bits (373), Expect = 1e-38
 Identities = 69/116 (59%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSS-GKQRQVWLWHRRLGHPSFSYLKH 223
           +DI T+ IIGR TKR GLYYVDD S    N +      K + +WLWHRRLGH SF YLK 
Sbjct: 504 QDIQTRAIIGRXTKRRGLYYVDDVSASHVNQVXSGHXNKNKTIWLWHRRLGHASFGYLKK 563

Query: 222 LLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTS 55
           LLP LF  + DS+F+C+ CILAKSHR SY  S NK   PF L+HSDVWGPSP++T+
Sbjct: 564 LLPSLFHGIXDSBFQCNDCILAKSHRTSYHSSFNKRTIPFELVHSDVWGPSPVATN 619


>gb|KYP76234.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 345

 Score =  140 bits (352), Expect = 1e-37
 Identities = 65/121 (53%), Positives = 89/121 (73%), Gaps = 1/121 (0%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNM-EHSSGKQRQVWLWHRRLGHPSFSYLKH 223
           +DILTKEI  RGTKRGGLYY++D ++ + NN+ + S+ K+ ++ +WH  +GHPSF Y+KH
Sbjct: 80  QDILTKEITWRGTKRGGLYYMEDLNSSRVNNVGKASNNKEGEIRVWHACMGHPSFYYMKH 139

Query: 222 LLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPISTSPAFV 43
           +LP LF+ +  S   CD CI+AKSHRV +P   NK +TPF LIH+DVWGPS +   P+ V
Sbjct: 140 VLPKLFAGVDLSKLTCDTCIVAKSHRVPFPTHLNKINTPFGLIHTDVWGPSSL---PSLV 196

Query: 42  G 40
           G
Sbjct: 197 G 197


>ref|XP_021819415.1| uncharacterized protein LOC110761277 [Prunus avium]
          Length = 496

 Score =  141 bits (355), Expect = 6e-37
 Identities = 65/93 (69%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNMEHSSG-KQRQVWLWHRRLGHPSFSYLKH 223
           +DILTKEIIGRGTKRGGLYYVDDFS GKA++++HSS    RQ+WLWHR LGHPSF Y++H
Sbjct: 394 QDILTKEIIGRGTKRGGLYYVDDFSMGKAHSVKHSSTWNDRQLWLWHRHLGHPSFGYMRH 453

Query: 222 LLPDLFSELHDSNFKCDACILAKSHRVSYPLSS 124
           L PDL S    ++F+CD CILAKSHR SYP S+
Sbjct: 454 LFPDLSSNSCTTDFQCDTCILAKSHRASYPSST 486


>gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1350

 Score =  141 bits (355), Expect(2) = 1e-36
 Identities = 67/121 (55%), Positives = 87/121 (71%), Gaps = 6/121 (4%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTG--KANNMEHSSGK----QRQVWLWHRRLGHPSF 238
           +DILT EIIGRG ++GGLYY++  + G  + + + H   K    + Q+WLWH+RLGHPSF
Sbjct: 327 QDILTGEIIGRGIEKGGLYYMEMTTAGNRRISEVHHIQKKPSTDEEQIWLWHKRLGHPSF 386

Query: 237 SYLKHLLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPIST 58
            YL+ L P LF     S+FKC+ CIL KSHRV++PLSSNKS +PF L+HSDVWGP P + 
Sbjct: 387 GYLQTLFPLLFQHNKPSDFKCNTCILGKSHRVTFPLSSNKSISPFDLVHSDVWGPCPATP 446

Query: 57  S 55
           S
Sbjct: 447 S 447



 Score = 39.7 bits (91), Expect(2) = 1e-36
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -3

Query: 55  SGIRWFVTFVDDCTRMTW 2
           SG++WFV FVDDCTRM+W
Sbjct: 447 SGMKWFVLFVDDCTRMSW 464


>gb|PRQ42978.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1051

 Score =  140 bits (354), Expect(2) = 2e-36
 Identities = 69/121 (57%), Positives = 82/121 (67%), Gaps = 6/121 (4%)
 Frame = -1

Query: 399 KDILTKEIIGRGTKRGGLYYVDDFSTGKANNME------HSSGKQRQVWLWHRRLGHPSF 238
           +DILT EIIGRG ++GGLYY++  + G     E       +S  + Q+WLWH+RLGHPSF
Sbjct: 152 QDILTGEIIGRGIEKGGLYYMEMTTAGNHRVSEVHQIQKGTSTNEEQIWLWHKRLGHPSF 211

Query: 237 SYLKHLLPDLFSELHDSNFKCDACILAKSHRVSYPLSSNKSDTPFALIHSDVWGPSPIST 58
            YL+ L P LF     S FKCD CIL KSHRVSYPLSS KS  PF L+HSDVWGP P + 
Sbjct: 212 GYLQTLFPLLFQHNKPSAFKCDTCILGKSHRVSYPLSSTKSIAPFDLVHSDVWGPCPPTP 271

Query: 57  S 55
           S
Sbjct: 272 S 272



 Score = 39.7 bits (91), Expect(2) = 2e-36
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -3

Query: 55  SGIRWFVTFVDDCTRMTW 2
           SG++WFV FVDDCTRM+W
Sbjct: 272 SGMKWFVLFVDDCTRMSW 289