BLASTX nr result

ID: Ophiopogon24_contig00026532 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00026532
         (440 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK70868.1| uncharacterized protein A4U43_C04F2350 [Asparagus...    58   5e-07

>gb|ONK70868.1| uncharacterized protein A4U43_C04F2350 [Asparagus officinalis]
          Length = 292

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 45/92 (48%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
 Frame = +3

Query: 135 SMKPA-VQADQMPAASKYNSRNPGRVXXXXXXXXXXKFNRTFNLVEADPVXXXXXXXXXX 311
           SMKPA VQADQMPA SKYNSRN  RV          +FNRTFN+VEA+P           
Sbjct: 60  SMKPAAVQADQMPA-SKYNSRNLTRVERLLRERELRRFNRTFNIVEAEP----------- 107

Query: 312 XXXXXCGFEAELG---LLEQEMGLKHLGRDPP 398
                 G   E+G   LLEQEMG      DPP
Sbjct: 108 ------GGPEEVGPVLLLEQEMG----PLDPP 129


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