BLASTX nr result

ID: Ophiopogon24_contig00026525 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00026525
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256228.1| DExH-box ATP-dependent RNA helicase DExH6 [A...    84   6e-16

>ref|XP_020256228.1| DExH-box ATP-dependent RNA helicase DExH6 [Asparagus officinalis]
 gb|ONK74446.1| uncharacterized protein A4U43_C03F6330 [Asparagus officinalis]
          Length = 1215

 Score = 83.6 bits (205), Expect = 6e-16
 Identities = 47/94 (50%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +3

Query: 51   GRKGLGFVTPGGFLRTLMSDSARMAPSHSHRFSGSMPNGPQ-RRFQNQKPRNKSQFLPHG 227
            GRKG  ++ P GFLR+LMSD+ R   SHSH   G +PNGPQ +RFQ Q PRN+S      
Sbjct: 1128 GRKGSAYIPPNGFLRSLMSDNNRATTSHSHMGRGPIPNGPQPKRFQQQNPRNES------ 1181

Query: 228  PGTNATAXXXXXXXXXXXXTLMNKSSKRRRPGKG 329
            P T A A            T  N SSKRR PGKG
Sbjct: 1182 PKTKAAAASSGNGGFGNGGTPKNNSSKRRWPGKG 1215


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