BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00026490
         (419 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ51837.1| putative RNA-directed DNA polymerase [Rosa chinen...   117   1e-30
gb|PRQ55303.1| putative RNA-directed DNA polymerase [Rosa chinen...   119   8e-30
gb|PRQ16575.1| putative RNA-directed DNA polymerase [Rosa chinen...   112   6e-29
dbj|GAV73037.1| hypothetical protein CFOL_v3_16524 [Cephalotus f...   111   2e-28
dbj|GAV85204.1| hypothetical protein CFOL_v3_28642, partial [Cep...   110   2e-28
gb|PRQ52014.1| putative RNA-directed DNA polymerase [Rosa chinen...   112   4e-28
dbj|GAV58787.1| hypothetical protein CFOL_v3_02320, partial [Cep...   112   5e-28
ref|XP_021809139.1| uncharacterized protein LOC110752729 [Prunus...   114   1e-27
gb|AFP55573.1| retrotransposon protein [Rosa rugosa]                  117   1e-27
dbj|GAV65999.1| hypothetical protein CFOL_v3_09510 [Cephalotus f...   109   2e-27
dbj|GAV67701.1| hypothetical protein CFOL_v3_11206, partial [Cep...   108   3e-27
dbj|GAV58988.1| hypothetical protein CFOL_v3_02521, partial [Cep...   109   5e-27
gb|PRQ50898.1| putative RNA-directed DNA polymerase [Rosa chinen...   112   5e-27
dbj|GAV73921.1| hypothetical protein CFOL_v3_17404, partial [Cep...   107   5e-27
dbj|GAV69397.1| hypothetical protein CFOL_v3_12898 [Cephalotus f...   108   7e-27
dbj|GAV57280.1| hypothetical protein CFOL_v3_00818 [Cephalotus f...   107   8e-27
gb|ERM98543.1| hypothetical protein AMTR_s04311p00004950, partia...   110   9e-27
dbj|GAV62548.1| hypothetical protein CFOL_v3_06071 [Cephalotus f...   108   2e-26
dbj|GAV72167.1| hypothetical protein CFOL_v3_15656, partial [Cep...   108   2e-26
gb|KYP77194.1| Retrovirus-related Pol polyprotein from transposo...   106   3e-26

>gb|PRQ51837.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 167

 Score =  117 bits (292), Expect = 1e-30
 Identities = 61/87 (70%), Positives = 70/87 (80%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHKGR QTGYVF   +TAIS RSTKQTLVATSSNH+E +ALHEA RE V   L
Sbjct: 5   DAGYLSDPHKGRSQTGYVFTMGSTAISWRSTKQTLVATSSNHAEIIALHEAVRECV--WL 62

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RSVI+HI+GSC L   T+EPT +YEDN
Sbjct: 63  RSVIRHIQGSCGLKSTTDEPTCIYEDN 89


>gb|PRQ55303.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 309

 Score =  119 bits (297), Expect = 8e-30
 Identities = 62/87 (71%), Positives = 70/87 (80%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHKGR QTGYVF   +TAIS RSTKQTLVATSSNH+E +ALHEA RE V   L
Sbjct: 147 DAGYLSDPHKGRSQTGYVFTMGSTAISWRSTKQTLVATSSNHAEIIALHEAVRECV--WL 204

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RSVI+HI+GSC L   TNEPT +YEDN
Sbjct: 205 RSVIRHIQGSCGLKSTTNEPTCIYEDN 231


>gb|PRQ16575.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 165

 Score =  112 bits (281), Expect = 6e-29
 Identities = 57/87 (65%), Positives = 69/87 (79%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHKGR QTGYVF   +TAIS RSTKQTLVATSSNH+E +ALHEA RE +   L
Sbjct: 5   DAGYLSDPHKGRSQTGYVFTMGSTAISWRSTKQTLVATSSNHAEIIALHEAVRECI--WL 62

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RSV++HIRG+C L    ++PT +YEDN
Sbjct: 63  RSVVRHIRGTCGLKSTIDKPTCIYEDN 89


>dbj|GAV73037.1| hypothetical protein CFOL_v3_16524 [Cephalotus follicularis]
          Length = 152

 Score =  111 bits (277), Expect = 2e-28
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHK R QTGYVF   +TAIS RSTKQT+ ATSSNHSE LA+HEASRE +   L
Sbjct: 27  DAGYLSDPHKARSQTGYVFTFCDTAISWRSTKQTMTATSSNHSEILAIHEASRECI--WL 84

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+IQHI+ SC L    N PTV+YEDN
Sbjct: 85  RSMIQHIQESCGLSSIRNNPTVIYEDN 111


>dbj|GAV85204.1| hypothetical protein CFOL_v3_28642, partial [Cephalotus
           follicularis]
          Length = 150

 Score =  110 bits (276), Expect = 2e-28
 Identities = 57/87 (65%), Positives = 67/87 (77%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHK R QTGY+F   +TAIS RSTKQT+ ATSSNHSE LA+HEASRE +   L
Sbjct: 3   DAGYLSDPHKARSQTGYLFTFCDTAISWRSTKQTMTATSSNHSEILAIHEASRECI--WL 60

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+IQHI+ SC L    N PTV+YEDN
Sbjct: 61  RSIIQHIQESCGLSSIRNNPTVIYEDN 87


>gb|PRQ52014.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 204

 Score =  112 bits (279), Expect = 4e-28
 Identities = 56/87 (64%), Positives = 67/87 (77%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHKGR QTGYVF    TAIS RSTKQTLVATSSNH+E +ALHEA RE +   L
Sbjct: 44  DAGYLSDPHKGRSQTGYVFTMGKTAISWRSTKQTLVATSSNHAEIIALHEAVRECI--WL 101

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS++ H+R +C L   T+EPT +YEDN
Sbjct: 102 RSIVTHVRNNCGLKSTTDEPTSIYEDN 128


>dbj|GAV58787.1| hypothetical protein CFOL_v3_02320, partial [Cephalotus
           follicularis]
          Length = 231

 Score =  112 bits (280), Expect = 5e-28
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHK R QTGYVF   +TAIS RSTKQT+ ATSSNHSE LA+HEASRE +   L
Sbjct: 71  DAGYLSDPHKARSQTGYVFTFCDTAISWRSTKQTMTATSSNHSETLAIHEASRECI--WL 128

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+IQHI+ SC L    N PTV+YEDN
Sbjct: 129 RSMIQHIQESCGLSSIRNNPTVIYEDN 155


>ref|XP_021809139.1| uncharacterized protein LOC110752729 [Prunus avium]
          Length = 382

 Score =  114 bits (286), Expect = 1e-27
 Identities = 60/87 (68%), Positives = 68/87 (78%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           +S YLSDPHKGR QTGYVF   NTAIS RSTKQTLVATSSNH+E LAL EASRE V   L
Sbjct: 171 DSGYLSDPHKGRSQTGYVFTCGNTAISWRSTKQTLVATSSNHAEILALPEASRECV--WL 228

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS++ HIR +C+L   T  PT++YEDN
Sbjct: 229 RSLVHHIRKTCDLSSTTKAPTIMYEDN 255


>gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
          Length = 2242

 Score =  117 bits (292), Expect = 1e-27
 Identities = 60/87 (68%), Positives = 70/87 (80%)
 Frame = -3

Query: 261  NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
            ++ YLSDPHKGR QTGYVF   +TAIS RSTKQTLVATSSNH+E +ALHEA RE +   L
Sbjct: 1368 DAGYLSDPHKGRSQTGYVFTMGSTAISGRSTKQTLVATSSNHAEIIALHEAVRECI--WL 1425

Query: 81   RSVIQHIRGSCELPEATNEPTVLYEDN 1
            RSVI+HI+GSC L   T+EPT +YEDN
Sbjct: 1426 RSVIRHIQGSCGLKSTTDEPTCIYEDN 1452


>dbj|GAV65999.1| hypothetical protein CFOL_v3_09510 [Cephalotus follicularis]
          Length = 178

 Score =  109 bits (272), Expect = 2e-27
 Identities = 56/87 (64%), Positives = 67/87 (77%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHK R QTGY+F   +TAIS RSTKQT+ ATSSNHS+ LA+HEASRE +   L
Sbjct: 18  DAGYLSDPHKARSQTGYIFTFCDTAISWRSTKQTMTATSSNHSKILAIHEASRECI--WL 75

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+IQHI+ SC L    N PTV+YEDN
Sbjct: 76  RSMIQHIQESCGLSSIRNNPTVIYEDN 102


>dbj|GAV67701.1| hypothetical protein CFOL_v3_11206, partial [Cephalotus
           follicularis]
          Length = 158

 Score =  108 bits (269), Expect = 3e-27
 Identities = 56/87 (64%), Positives = 65/87 (74%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHK R QTGYVF   +TAIS RSTKQT+  TSSNHSE L +HEASRE +   L
Sbjct: 2   DAGYLSDPHKARSQTGYVFTFCDTAISWRSTKQTMTTTSSNHSEILTIHEASRECI--WL 59

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+IQHI+ SC L    N PTV+YEDN
Sbjct: 60  RSMIQHIQESCGLSSIKNNPTVIYEDN 86


>dbj|GAV58988.1| hypothetical protein CFOL_v3_02521, partial [Cephalotus
           follicularis]
          Length = 231

 Score =  109 bits (273), Expect = 5e-27
 Identities = 56/87 (64%), Positives = 67/87 (77%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHK R QTGY+F   +TAIS RSTKQT+ ATSSNHSE LA+HEASRE +   L
Sbjct: 71  DAGYLSDPHKARSQTGYLFTFCDTAISWRSTKQTMTATSSNHSEILAIHEASRECI--WL 128

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+IQHI+ SC L    N PT++YEDN
Sbjct: 129 RSMIQHIQESCGLSSIRNNPTIIYEDN 155


>gb|PRQ50898.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 333

 Score =  112 bits (279), Expect = 5e-27
 Identities = 56/87 (64%), Positives = 67/87 (77%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHKGR QTGYVF    TAIS RSTKQTLVATSSNH+E +ALHEA RE +   L
Sbjct: 173 DAGYLSDPHKGRSQTGYVFTMGKTAISWRSTKQTLVATSSNHAEIIALHEAVRECI--WL 230

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS++ H+R +C L   T+EPT +YEDN
Sbjct: 231 RSIVTHVRSNCGLKSTTDEPTSIYEDN 257


>dbj|GAV73921.1| hypothetical protein CFOL_v3_17404, partial [Cephalotus
           follicularis]
          Length = 163

 Score =  107 bits (268), Expect = 5e-27
 Identities = 56/87 (64%), Positives = 66/87 (75%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHK R QTGYVF   +T IS RSTKQT+ ATSSNHSE LA+H+ASRE +   L
Sbjct: 3   DAGYLSDPHKARSQTGYVFTFCDTPISWRSTKQTMTATSSNHSEILAIHKASRECI--WL 60

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+IQHI+ SC L    N PTV+YEDN
Sbjct: 61  RSMIQHIQESCGLSSIRNNPTVIYEDN 87


>dbj|GAV69397.1| hypothetical protein CFOL_v3_12898 [Cephalotus follicularis]
          Length = 187

 Score =  108 bits (269), Expect = 7e-27
 Identities = 56/89 (62%), Positives = 68/89 (76%)
 Frame = -3

Query: 267 HNNSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRL 88
           ++++ YLSDPHK R QTGYVF   +TAIS RSTKQT+ ATSSNHSE +A+HEASRE +  
Sbjct: 25  YDDAGYLSDPHKARSQTGYVFTFCDTAISWRSTKQTMTATSSNHSEIIAIHEASRECI-- 82

Query: 87  RLRSVIQHIRGSCELPEATNEPTVLYEDN 1
            LRS+IQHI+ SC L    N PTV+ EDN
Sbjct: 83  WLRSMIQHIQESCGLSSIRNNPTVINEDN 111


>dbj|GAV57280.1| hypothetical protein CFOL_v3_00818 [Cephalotus follicularis]
          Length = 150

 Score =  107 bits (266), Expect = 8e-27
 Identities = 56/87 (64%), Positives = 66/87 (75%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDP K R QTGY+F   +TAIS RSTKQT+ ATSSNHSE LA+HEASRE +   L
Sbjct: 27  DAGYLSDPRKARSQTGYLFTFCDTAISWRSTKQTMTATSSNHSEILAIHEASRECI--WL 84

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+IQHI+ SC L    N PTV+YEDN
Sbjct: 85  RSMIQHIQESCGLSSIRNNPTVIYEDN 111


>gb|ERM98543.1| hypothetical protein AMTR_s04311p00004950, partial [Amborella
           trichopoda]
          Length = 288

 Score =  110 bits (275), Expect = 9e-27
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHK R QTGY+F   +TAIS RSTKQTLVATSSNH+E LA+HEASRE V   L
Sbjct: 121 DAGYLSDPHKARSQTGYLFTCGDTAISWRSTKQTLVATSSNHAEILAIHEASRECV--WL 178

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+ QHIRG+C L      PT+LYEDN
Sbjct: 179 RSMTQHIRGTCGLTSNKEVPTILYEDN 205


>dbj|GAV62548.1| hypothetical protein CFOL_v3_06071 [Cephalotus follicularis]
          Length = 259

 Score =  108 bits (271), Expect = 2e-26
 Identities = 57/87 (65%), Positives = 66/87 (75%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YL DPHK R QTGYVF   +TAIS RSTKQT+ ATSSNHSE LA+HEASRE +   L
Sbjct: 99  DAGYLFDPHKERSQTGYVFTFCDTAISWRSTKQTMTATSSNHSEILAIHEASRECI--WL 156

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+IQHI+ SC L    N PTV+YEDN
Sbjct: 157 RSMIQHIQESCRLSSIKNNPTVIYEDN 183


>dbj|GAV72167.1| hypothetical protein CFOL_v3_15656, partial [Cephalotus
           follicularis]
          Length = 231

 Score =  108 bits (269), Expect = 2e-26
 Identities = 56/87 (64%), Positives = 65/87 (74%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++ YLSDPHK R Q GYVF   +TAIS RSTKQT+ ATSSNHSE  A+HEASRE +   L
Sbjct: 71  DAGYLSDPHKARSQIGYVFTFCDTAISWRSTKQTMTATSSNHSEIFAIHEASRECI--WL 128

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RS+IQHI+ SC L    N PTV+YEDN
Sbjct: 129 RSMIQHIQESCRLSSIRNNPTVIYEDN 155


>gb|KYP77194.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 177

 Score =  106 bits (264), Expect = 3e-26
 Identities = 55/87 (63%), Positives = 66/87 (75%)
 Frame = -3

Query: 261 NSDYLSDPHKGRPQTGYVFLNSNTAISKRSTKQTLVATSSNHSENLALHEASREYVRLRL 82
           ++DYLS+PH G+ QTGY+F N  TAIS RS KQT+ ATSSNH+E LALHEASRE V   L
Sbjct: 7   DADYLSNPHNGKSQTGYLFTNGGTAISWRSVKQTISATSSNHAEILALHEASRECV--WL 64

Query: 81  RSVIQHIRGSCELPEATNEPTVLYEDN 1
           RSVIQHIR +C L  +    T++YEDN
Sbjct: 65  RSVIQHIRETCGLSSSKMTSTIIYEDN 91