BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00026377
         (581 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   175   4e-47
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo...   167   4e-46
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   167   2e-44
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   162   1e-42
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   155   2e-40
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   155   2e-40
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   154   8e-40
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     152   5e-39
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   152   5e-39
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   150   2e-38
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     149   4e-38
ref|XP_019435951.1| PREDICTED: uncharacterized protein LOC109342...   148   8e-38
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   148   8e-38
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     147   2e-37
gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen...   146   5e-37
gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinen...   143   6e-37
gb|KZV22485.1| hypothetical protein F511_19705 [Dorcoceras hygro...   142   7e-37
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]                        144   2e-36
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...   144   2e-36
gb|ASR75372.1| retrotransposon protein [Oryza nivara]                 144   3e-36

>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  175 bits (443), Expect = 4e-47
 Identities = 105/206 (50%), Positives = 127/206 (61%), Gaps = 13/206 (6%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +LVQ+DVKT FLH DL+EEIYMTQP  FK AGKEN+   L+ SLYG+K      YKRFD 
Sbjct: 686  ELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAGKENMFCKLEKSLYGLKQSPRQWYKRFDK 745

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM+ + YTRS YD CVYL+K  +G +IYLL      LIAS +   I KLK+QL+ EFE+K
Sbjct: 746  FMLRQKYTRSKYDHCVYLRKLHDGSFIYLLLYVDDMLIASKNKEEIEKLKTQLNGEFEMK 805

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL E +K+L M+I RD K GRLCLTQK    +  KR  +                     
Sbjct: 806  DLGEAKKILGMEISRDRKLGRLCLTQKEYLKRVLKRFGISDESKPVSTPLASHFKLSANL 865

Query: 507  LQRQ-LKSVSMTHVPYASAVGSLMYA 581
              R   +   M+ VPYASAVGSLMYA
Sbjct: 866  SPRDAAEKAYMSKVPYASAVGSLMYA 891


>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 503

 Score =  167 bits (424), Expect = 4e-46
 Identities = 97/205 (47%), Positives = 128/205 (62%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3   DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
           +L QLDVKT FLH +L+EEIYM QP  F    KE+L+  LK SLYG+K      YK+FDS
Sbjct: 89  ELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDS 148

Query: 165 FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
           FMIG+GY+RS YD C+Y Q+ P+G +IYLL      LIAS D   I+KLK+QL++EFE+K
Sbjct: 149 FMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMK 208

Query: 327 DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
           +L   +K+L M+I RD + G+L L+Q+    +   R  +                    C
Sbjct: 209 ELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLC 268

Query: 507 LQRQLKSVSMTHVPYASAVGSLMYA 581
            Q + +   M+HVPYASAVGSLMYA
Sbjct: 269 PQTKEEMERMSHVPYASAVGSLMYA 293


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  167 bits (424), Expect = 2e-44
 Identities = 97/205 (47%), Positives = 128/205 (62%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L QLDVKT FLH +L+EEIYM QP  F    KE+L+  LK SLYG+K      YK+FDS
Sbjct: 618  ELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDS 677

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FMIG+GY+RS YD C+Y Q+ P+G +IYLL      LIAS D   I+KLK+QL++EFE+K
Sbjct: 678  FMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMK 737

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            +L   +K+L M+I RD + G+L L+Q+    +   R  +                    C
Sbjct: 738  ELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLC 797

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
             Q + +   M+HVPYASAVGSLMYA
Sbjct: 798  PQTKEEMERMSHVPYASAVGSLMYA 822


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  162 bits (410), Expect = 1e-42
 Identities = 96/205 (46%), Positives = 123/205 (60%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L QLDVKT FLH +L+EEIY+ QP  F   GKEN +  LK SLYG+K      YKRFDS
Sbjct: 578  ELEQLDVKTAFLHGNLEEEIYIQQPEGFVVPGKENHVCRLKKSLYGLKQSPRQWYKRFDS 637

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM G GY+RS YD CVY QK  +G  +YLL      LIA+ D   + KLK QL+SEF++K
Sbjct: 638  FMTGHGYSRSSYDNCVYFQKLSDGSLVYLLLYVDDMLIAARDKTLVDKLKVQLNSEFDMK 697

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M+I RD + G+L L+QK    K   R  +                   +C
Sbjct: 698  DLGPAKKILGMEINRDRQAGKLFLSQKKYVMKMLDRFGMRDCKAVNTPLAAHFKLSSDQC 757

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
             Q + +   M+HVPY++AVGSLMYA
Sbjct: 758  PQSEEEQRRMSHVPYSNAVGSLMYA 782


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  155 bits (393), Expect = 2e-40
 Identities = 96/205 (46%), Positives = 120/205 (58%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L QLDVKT FLH +L+E IYM QP  F   GKE+ + +LK SLYG+K      YKRFDS
Sbjct: 1429 ELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDS 1488

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FMI  GYTR  YD CVY +K  +G +IYLL      LIAS +   I KLKSQLS EFE+K
Sbjct: 1489 FMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMK 1548

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M I RD K G+L ++QK    K  +R  +                     
Sbjct: 1549 DLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGMDKAKTVSTPLAPHFKLSAELS 1608

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
             Q   +   M+H+PY+SAVGS+MYA
Sbjct: 1609 PQSDEEKQQMSHIPYSSAVGSVMYA 1633


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  155 bits (393), Expect = 2e-40
 Identities = 96/205 (46%), Positives = 120/205 (58%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L QLDVKT FLH +L+E IYM QP  F   GKE+ + +LK SLYG+K      YKRFDS
Sbjct: 1408 ELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDS 1467

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FMI  GYTR  YD CVY +K  +G +IYLL      LIAS +   I KLKSQLS EFE+K
Sbjct: 1468 FMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMK 1527

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M I RD K G+L ++QK    K  +R  +                     
Sbjct: 1528 DLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGMDKAKTVSTPLAPHFKLSAELS 1587

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
             Q   +   M+H+PY+SAVGS+MYA
Sbjct: 1588 PQSDEEKQQMSHIPYSSAVGSVMYA 1612


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  154 bits (389), Expect = 8e-40
 Identities = 97/205 (47%), Positives = 121/205 (59%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L Q+DVKT FLH +L+E+IYM QP  F   GKENL+  LK SLYG+K      YKRFDS
Sbjct: 665  ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDS 724

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM+ + + RS YD CVYL K  +G  IYLL      LIA+ D   I KLK+QLSSEFE+K
Sbjct: 725  FMLSQKFRRSNYDNCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMK 783

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M+I R+   G+L L+QKG   K  +R  +                    C
Sbjct: 784  DLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRSSSDLC 843

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
             Q       M+ VPY+SAVGSLMYA
Sbjct: 844  PQSDYDIEYMSRVPYSSAVGSLMYA 868


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  152 bits (383), Expect = 5e-39
 Identities = 96/205 (46%), Positives = 118/205 (57%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L Q+DVKT FLH +L+E+IYM QP  F   GKENL+  LK SLYG+K      YKRFDS
Sbjct: 802  ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFDS 861

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM  + + RS YD CVYL K  +G  IYLL      LIA+ D   I KLK+QLSSEFE+K
Sbjct: 862  FMFSQKFRRSNYDSCVYL-KVVDGSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMK 920

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M+I R+   G+L L+QKG   K  +R  +                    C
Sbjct: 921  DLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLC 980

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
             Q       M+ VPY S VGSLMYA
Sbjct: 981  PQSDYDIEYMSRVPYLSVVGSLMYA 1005


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  152 bits (383), Expect = 5e-39
 Identities = 97/205 (47%), Positives = 120/205 (58%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L Q+DVKT FLH +L+E+IYM QP  F   GKENL+  LK SLYG+K      YKRFDS
Sbjct: 1130 ELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDS 1189

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM+ + + RS YD CVYL K  +G  IYLL      LIA+ D   IAKLK+QLSSEFE+K
Sbjct: 1190 FMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMK 1248

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M+I R     +L L+QKG   K  +R  +                    C
Sbjct: 1249 DLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLC 1308

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
             Q       M+ VPY+SAVGSLMYA
Sbjct: 1309 PQSDYDIEYMSRVPYSSAVGSLMYA 1333


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  150 bits (378), Expect = 2e-38
 Identities = 97/205 (47%), Positives = 121/205 (59%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L Q+DVKT FLH +L+E+IYM QP  F   GKENL+  LK SLYG+K      YKRFDS
Sbjct: 958  ELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDS 1017

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM+ + + RS YD CVYL K  +G  IYLL      LIA+ D   IAKLK+QLSSEF +K
Sbjct: 1018 FMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMK 1076

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M+I R+   G+L L+QKG   K  +R  +                    C
Sbjct: 1077 DLGAAKKILGMEITRERHSGKLYLSQKGYIKKVLRRFNM----------HDVKPIIFRLC 1126

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
             Q       M+ VPY+SAVGSLMYA
Sbjct: 1127 PQSDYDIEYMSRVPYSSAVGSLMYA 1151


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  149 bits (376), Expect = 4e-38
 Identities = 96/205 (46%), Positives = 119/205 (58%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L Q+DVKT FLH +L+E+IYM QP  F   GKENL+  LK SLYG+K      YKRFDS
Sbjct: 832  ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDS 891

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM+ + + RS YD CVYL K  +G  IYLL      LIA+ D   IAKLK+QLSSEFE+K
Sbjct: 892  FMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMK 950

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M+I R+   G+L L+QK    K   R  +                    C
Sbjct: 951  DLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAKLVSTLLAAHFRLSSDLC 1010

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
             Q       M+ VPY+SAV SLMYA
Sbjct: 1011 PQSAYDIEYMSRVPYSSAVSSLMYA 1035


>ref|XP_019435951.1| PREDICTED: uncharacterized protein LOC109342419, partial [Lupinus
           angustifolius]
          Length = 1102

 Score =  148 bits (374), Expect = 8e-38
 Identities = 90/198 (45%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
 Frame = +3

Query: 24  KTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDSFMIGKGY 185
           KT FLH +L+E+IYM QP  F+  GKE+ + +LK SLYG+K      Y+RFD+FM+  GY
Sbjct: 1   KTAFLHGELEEQIYMKQPEGFEVQGKEDHVCLLKKSLYGLKQSSRQWYRRFDTFMLENGY 60

Query: 186 TRSPYDPCVYLQKRPNGEYIYLLL------IASNDSVTIAKLKSQLSSEFEIKDLWEERK 347
            RS +D CVY +K  N  +IYLLL      IA  +   I  LK+QLSSEFE+KDL   RK
Sbjct: 61  CRSEHDSCVYYKKLANKSFIYLLLYVDDMLIACKNMSEIKSLKAQLSSEFEMKDLGAGRK 120

Query: 348 MLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRCLQRQLKS 527
           +L M+I+RD K G L L+QK    K  +R  +                    C Q + ++
Sbjct: 121 ILGMEIQRDRKEGTLFLSQKKYIEKVLERFGMQNAKPVTTPLASHFKLSMALCPQTESEN 180

Query: 528 VSMTHVPYASAVGSLMYA 581
             M+ VPYASAVGSLMYA
Sbjct: 181 EEMSSVPYASAVGSLMYA 198



 Score =  148 bits (374), Expect = 8e-38
 Identities = 90/198 (45%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
 Frame = +3

Query: 24  KTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDSFMIGKGY 185
           KT FLH +L+E+IYM QP  F+  GKE+ + +LK SLYG+K      Y+RFD+FM+  GY
Sbjct: 358 KTAFLHGELEEQIYMKQPEGFEVQGKEDHVCLLKKSLYGLKQSSRQWYRRFDTFMLENGY 417

Query: 186 TRSPYDPCVYLQKRPNGEYIYLLL------IASNDSVTIAKLKSQLSSEFEIKDLWEERK 347
            RS +D CVY +K  N  +IYLLL      IA  +   I  LK+QLSSEFE+KDL   RK
Sbjct: 418 CRSEHDSCVYYKKLANKSFIYLLLYVDDMLIACKNMSEIKSLKAQLSSEFEMKDLGAGRK 477

Query: 348 MLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRCLQRQLKS 527
           +L M+I+RD K G L L+QK    K  +R  +                    C Q + ++
Sbjct: 478 ILGMEIQRDRKEGTLFLSQKKYIEKVLERFGMQNAKPVTTPLASHFKLSMALCPQTESEN 537

Query: 528 VSMTHVPYASAVGSLMYA 581
             M+ VPYASAVGSLMYA
Sbjct: 538 EEMSSVPYASAVGSLMYA 555



 Score =  148 bits (374), Expect = 8e-38
 Identities = 90/198 (45%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
 Frame = +3

Query: 24   KTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDSFMIGKGY 185
            KT FLH +L+E+IYM QP  F+  GKE+ + +LK SLYG+K      Y+RFD+FM+  GY
Sbjct: 715  KTAFLHGELEEQIYMKQPEGFEVQGKEDHVCLLKKSLYGLKQSSRQWYRRFDTFMLENGY 774

Query: 186  TRSPYDPCVYLQKRPNGEYIYLLL------IASNDSVTIAKLKSQLSSEFEIKDLWEERK 347
             RS +D CVY +K  N  +IYLLL      IA  +   I  LK+QLSSEFE+KDL   RK
Sbjct: 775  CRSEHDSCVYYKKLANKSFIYLLLYVDDMLIACKNMSEIKSLKAQLSSEFEMKDLGAGRK 834

Query: 348  MLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRCLQRQLKS 527
            +L M+I+RD K G L L+QK    K  +R  +                    C Q + ++
Sbjct: 835  ILGMEIQRDRKEGTLFLSQKKYIEKVLERFGMQNAKPVTTPLASHFKLSMALCPQTESEN 894

Query: 528  VSMTHVPYASAVGSLMYA 581
              M+ VPYASAVGSLMYA
Sbjct: 895  EEMSSVPYASAVGSLMYA 912


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  148 bits (374), Expect = 8e-38
 Identities = 93/205 (45%), Positives = 118/205 (57%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L QLDVKT FLH +L+EEIYMTQP  F+  GKEN +  LK SLYG+K      YKRFDS
Sbjct: 898  ELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDS 957

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYL------LLIASNDSVTIAKLKSQLSSEFEIK 326
            +M+  GYTRS YD CVY  +  +  +IYL      +LIA+     I KLK  LS+EFE+K
Sbjct: 958  YMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMK 1017

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   RK+L M+I RD +  +L L+Q+    K   R  +                     
Sbjct: 1018 DLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLTAMFA 1077

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
             Q + +   M+ VPYASAVGSLMYA
Sbjct: 1078 PQSEEEKEYMSRVPYASAVGSLMYA 1102


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  147 bits (371), Expect = 2e-37
 Identities = 94/205 (45%), Positives = 119/205 (58%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L Q++VKT FLH +L+E+IYM QP  F   GKENL+  LK SLYG+K      YKRFDS
Sbjct: 895  ELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDS 954

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM+ + +  S YD CVYL K  +G  IYLL      LIA+ D   I KLK+QLSSEFE+K
Sbjct: 955  FMLSQKFRISNYDSCVYL-KVVDGSVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMK 1013

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M+I R+   G+L L+QKG   K  +R  +                    C
Sbjct: 1014 DLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLC 1073

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
                     M+ VPY+SAVGSLMYA
Sbjct: 1074 PLSDYDIEYMSRVPYSSAVGSLMYA 1098


>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1340

 Score =  146 bits (368), Expect = 5e-37
 Identities = 86/205 (41%), Positives = 118/205 (57%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            ++ QLDVKT FLH DL+EEIYM QP  F+  GK++++  LK SLYG+K      YK+FDS
Sbjct: 927  EVEQLDVKTAFLHGDLEEEIYMEQPEGFEVEGKQHMVCKLKKSLYGLKQAPRQWYKKFDS 986

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM+G GY R+  DPCVYLQ+   G +I LL      LI   D   I KLK+ LS  F++K
Sbjct: 987  FMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIHKLKADLSKSFDMK 1046

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +++L M+I RD +  +L L+Q+    +  +R  +                    C
Sbjct: 1047 DLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSC 1106

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
               Q++   M  +PY+SAVGSLMYA
Sbjct: 1107 PTTQVEKDKMAGIPYSSAVGSLMYA 1131


>gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 501

 Score =  143 bits (361), Expect = 6e-37
 Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3   DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
           ++ QLDVKT FLH DL+EEIYM QP  F+   K++++  LK SLYG+K      YK+FDS
Sbjct: 88  EVEQLDVKTAFLHGDLEEEIYMEQPEGFEVERKQHMVCKLKKSLYGLKQAPRQWYKKFDS 147

Query: 165 FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
           FM+G GY R+  DPCVYLQ+   G +I LL      LI   D   I KLK+ LS  F++K
Sbjct: 148 FMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIRKLKADLSKSFDMK 207

Query: 327 DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
           DL   +++L M+I RD +  +L L+Q+    +  +R  +                    C
Sbjct: 208 DLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSC 267

Query: 507 LQRQLKSVSMTHVPYASAVGSLMYA 581
              Q++   M  +PY+SAVGSLMYA
Sbjct: 268 PTTQVEKDKMAGIPYSSAVGSLMYA 292


>gb|KZV22485.1| hypothetical protein F511_19705 [Dorcoceras hygrometricum]
          Length = 425

 Score =  142 bits (357), Expect = 7e-37
 Identities = 82/204 (40%), Positives = 113/204 (55%), Gaps = 12/204 (5%)
 Frame = +3

Query: 6   LVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDSF 167
           L QLDVKT FLH DL+EEIYM QP  F   GKENL+  LK SLYG+K      YKRFDS+
Sbjct: 89  LEQLDVKTAFLHGDLEEEIYMLQPEGFAETGKENLVCRLKKSLYGLKQAPRCWYKRFDSY 148

Query: 168 MIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIKD 329
           ++  GY R   DPC Y ++    +YI LL      L+A  +   + +LK+QL+ EF++KD
Sbjct: 149 IMSLGYNRLSADPCTYFKRSGGNDYIILLLYVDDMLVAGPNKDRVQELKAQLAREFDMKD 208

Query: 330 LWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRCL 509
           L    K+L M++ RD    ++ L+Q     K+  R  +                    C 
Sbjct: 209 LGPANKILGMQVHRDRSNRKIWLSQTNYLQKFLHRFNMQDSKPISTPLPVNFKLSSDMCP 268

Query: 510 QRQLKSVSMTHVPYASAVGSLMYA 581
             + + + M+ +PYASAVGSLM+A
Sbjct: 269 SNEAERMEMSRIPYASAVGSLMFA 292


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
          Length = 1335

 Score =  144 bits (364), Expect = 2e-36
 Identities = 91/205 (44%), Positives = 114/205 (55%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIKY------KRFDS 164
            +L QLDVKT FLH +L+E+IYM QP  F   GKE  +  LK SLYG+K       KRFDS
Sbjct: 926  ELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDS 985

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM+   + RS YD CVY+ K  NG  IYLL      LIA+   + I KLK  LSSEF++K
Sbjct: 986  FMLSHSFKRSKYDSCVYI-KHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMK 1044

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M+I RD K G L L+Q     K  +R  +                   +C
Sbjct: 1045 DLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQC 1104

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
                 +   M+ VPY+SAVGSLMYA
Sbjct: 1105 PSTDAEIEYMSRVPYSSAVGSLMYA 1129


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
            Group]
 gb|AAN04164.1| Putative retrotransposon protein [Oryza sativa Japonica Group]
 gb|AAP53029.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 1229

 Score =  144 bits (363), Expect = 2e-36
 Identities = 91/205 (44%), Positives = 116/205 (56%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L QLDVKT+FLH +L+EEIYM QP  F   GKE+ +  LK SLYG+K      YKRFDS
Sbjct: 859  ELEQLDVKTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPRQWYKRFDS 918

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM+  G+ RS +D CVY+ K  NG +IYLL      LIA+     I  LK QLSSEF++K
Sbjct: 919  FMLSHGFKRSEFDSCVYI-KFVNGSHIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMK 977

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M+I RD   G L L+Q+    K  +R  +                   +C
Sbjct: 978  DLVASKKILGMEITRDINSGLLFLSQQSYIKKVLQRFNIHDAKPVSTPIAPHFKLSALQC 1037

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
                     M+ VPY+S VGSLMYA
Sbjct: 1038 TSTDEDVEYMSRVPYSSVVGSLMYA 1062


>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
          Length = 1170

 Score =  144 bits (362), Expect = 3e-36
 Identities = 92/205 (44%), Positives = 115/205 (56%), Gaps = 12/205 (5%)
 Frame = +3

Query: 3    DLVQLDVKTVFLHVDLDEEIYMTQPTEFKAAGKENLLRMLK*SLYGIK------YKRFDS 164
            +L QLDVKT FLH +L+EEIYM QP  F   GKE+ +  LK SLYG+K      YKRFDS
Sbjct: 833  ELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDS 892

Query: 165  FMIGKGYTRSPYDPCVYLQKRPNGEYIYLL------LIASNDSVTIAKLKSQLSSEFEIK 326
            FM+  G+ RS +D CVY+ K  NG  IYLL      LIA+     I  LK QLSSEF++K
Sbjct: 893  FMLSHGFKRSEFDSCVYI-KFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMK 951

Query: 327  DLWEERKMLDMKIERD*K*GRLCLTQKGT*GKYSKRLTLMXXXXXXXXXXXXXXXXXXRC 506
            DL   +K+L M+I RD   G L L+Q+    K  +R  +                   +C
Sbjct: 952  DLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKLSALQC 1011

Query: 507  LQRQLKSVSMTHVPYASAVGSLMYA 581
                     M+ VPY+SAVGSLMYA
Sbjct: 1012 ASTDEDVEYMSRVPYSSAVGSLMYA 1036