BLASTX nr result

ID: Ophiopogon24_contig00025989 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00025989
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KUM45861.1| hypothetical protein ABT39_MTgene2215 (mitochondr...    87   5e-20
gb|KUM45860.1| hypothetical protein ABT39_MTgene2214 (mitochondr...    65   5e-11
ref|YP_009045721.1| orf127b (mitochondrion) [Batis maritima] >gi...    58   7e-08

>gb|KUM45861.1| hypothetical protein ABT39_MTgene2215 (mitochondrion) [Picea
           glauca]
          Length = 46

 Score = 87.0 bits (214), Expect = 5e-20
 Identities = 42/46 (91%), Positives = 43/46 (93%)
 Frame = +1

Query: 223 MHGRIGVADQEPADQSQTAVTLSHPGTTRRGPGISAPLGQGSTDQI 360
           MH +I VADQEPADQSQTAV LSHPGTTRRGPGISAPLGQGSTDQI
Sbjct: 1   MHRKIEVADQEPADQSQTAVRLSHPGTTRRGPGISAPLGQGSTDQI 46


>gb|KUM45860.1| hypothetical protein ABT39_MTgene2214 (mitochondrion) [Picea
           glauca]
          Length = 79

 Score = 65.1 bits (157), Expect = 5e-11
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = -1

Query: 133 MHLTDREDYVEWYASVSTGPILPPHMRIGS 44
           MHLTDREDYVEW ASVSTGPILPPHMRIGS
Sbjct: 1   MHLTDREDYVEWSASVSTGPILPPHMRIGS 30


>ref|YP_009045721.1| orf127b (mitochondrion) [Batis maritima]
 gb|AIC83324.1| orf127b (mitochondrion) [Batis maritima]
          Length = 127

 Score = 58.2 bits (139), Expect = 7e-08
 Identities = 36/66 (54%), Positives = 38/66 (57%)
 Frame = +1

Query: 265 QSQTAVTLSHPGTTRRGPGISAPLGQGSTDQI*LDXXXXXXXXXXXXXXGDLHPHSINRS 444
           Q QTAVTLSHPGTTRR P +S    +     I  D              GDLHPHSINRS
Sbjct: 16  QFQTAVTLSHPGTTRRDP-VSPTRAREYRSDIATDSSSLRPISKRPP--GDLHPHSINRS 72

Query: 445 STQTKK 462
           STQTKK
Sbjct: 73  STQTKK 78


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