BLASTX nr result
ID: Ophiopogon24_contig00025859
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00025859
(806 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020251790.1| pentatricopeptide repeat-containing protein ... 394 e-130
ref|XP_020108984.1| pentatricopeptide repeat-containing protein ... 327 e-103
ref|XP_020080456.1| pentatricopeptide repeat-containing protein ... 320 e-101
ref|XP_009392128.1| PREDICTED: pentatricopeptide repeat-containi... 320 e-101
ref|XP_010906580.1| PREDICTED: pentatricopeptide repeat-containi... 315 2e-98
ref|XP_020699418.1| pentatricopeptide repeat-containing protein ... 305 1e-94
ref|XP_020574222.1| putative pentatricopeptide repeat-containing... 275 4e-86
gb|PKA54108.1| Pentatricopeptide repeat-containing protein [Apos... 276 6e-84
gb|OVA03451.1| Pentatricopeptide repeat [Macleaya cordata] 271 6e-83
ref|XP_010234581.1| PREDICTED: pentatricopeptide repeat-containi... 262 3e-79
gb|PIA42397.1| hypothetical protein AQUCO_02000090v1 [Aquilegia ... 253 5e-75
ref|XP_006660042.1| PREDICTED: pentatricopeptide repeat-containi... 246 3e-73
gb|ONM40418.1| Pentatricopeptide (PPR) repeat-containing protein... 231 6e-69
ref|XP_002458168.1| pentatricopeptide repeat-containing protein ... 234 1e-68
ref|XP_008675350.1| pentatricopeptide repeat-containing protein ... 231 1e-67
gb|KMZ69418.1| hypothetical protein ZOSMA_214G00060 [Zostera mar... 225 5e-65
ref|XP_020529674.1| pentatricopeptide repeat-containing protein ... 171 8e-46
gb|ERN16632.1| hypothetical protein AMTR_s00051p00085060 [Ambore... 171 2e-45
pdb|5IWW|D Chain D, Crystal structure of RNA editing factor of d... 135 4e-34
gb|ABR17838.1| unknown [Picea sitchensis] 130 1e-30
>ref|XP_020251790.1| pentatricopeptide repeat-containing protein At4g21065-like [Asparagus
officinalis]
gb|ONK78948.1| uncharacterized protein A4U43_C01F1320 [Asparagus officinalis]
Length = 728
Score = 394 bits (1011), Expect = e-130
Identities = 201/268 (75%), Positives = 226/268 (84%)
Frame = +3
Query: 3 DAELAMRVLGQMVGSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRVDE 182
+ ELA+ VLG+MV VRP+ ATFNTLL I ++ LD LKE HGFAVRNVGV + VDE
Sbjct: 208 EVELALNVLGKMVEDVRPNHATFNTLLPVISEISTLDLLKEFHGFAVRNVGVVDISPVDE 267
Query: 183 ERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMA 362
ERLWS IAAGYA H M A +LFE++KLKNS LGNSMISGFLN QTD+AF FREMA
Sbjct: 268 ERLWSAIAAGYAC-HRAMGCAMKLFERIKLKNSHLGNSMISGFLNCGQTDEAFSVFREMA 326
Query: 363 AECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRKGD 542
AECI EAKILSKVSLTLLLPEC KTGLEIHAYA+RRGLESDTSVGNALMAMY ++ D
Sbjct: 327 AECIHEAKILSKVSLTLLLPECGVNTKTGLEIHAYAIRRGLESDTSVGNALMAMYSKRED 386
Query: 543 KESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNG 722
KESVEKVF RTI++DVVSWNTI+ASY ++EFDRAFELFQ++ A GLKPDEYSFSS+LNG
Sbjct: 387 KESVEKVFVRTIDKDVVSWNTIIASYVMTNEFDRAFELFQRISAEGLKPDEYSFSSILNG 446
Query: 723 CGNSSYLRQGMALHGHMIKSGFSQSYPV 806
CG SSYL+QGMALHGHM+KSGFS+SYPV
Sbjct: 447 CGLSSYLQQGMALHGHMMKSGFSRSYPV 474
Score = 76.6 bits (187), Expect = 4e-12
Identities = 52/214 (24%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+H +A+R G++ + + + + A Y+ R + ++F + K+ N++I
Sbjct: 357 EIHAYAIRR----GLE--SDTSVGNALMAMYSKRED-KESVEKVFVRTIDKDVVSWNTII 409
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKA--KTGLEIHAYAVR 476
+ ++ + + D+AF F+ ++AE ++ + S + +L C + + G+ +H + ++
Sbjct: 410 ASYVMTNEFDRAFELFQRISAEGLKP----DEYSFSSILNGCGLSSYLQQGMALHGHMMK 465
Query: 477 RGLE-SDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
G S V N+LM Y + G E +VF D +SWNTI++ Y +
Sbjct: 466 SGFSRSYPVVQNSLMDAYGKCGCVEEARRVFDEMEWSDSISWNTIISCYGFNDSPYETIS 525
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGM 755
LF++M+ G KP+ +F ++L+ C ++ L +G+
Sbjct: 526 LFEKMIEQGWKPNRITFIALLSACSHAGLLEEGL 559
>ref|XP_020108984.1| pentatricopeptide repeat-containing protein At2g13600-like [Ananas
comosus]
Length = 762
Score = 327 bits (837), Expect = e-103
Identities = 168/270 (62%), Positives = 211/270 (78%), Gaps = 2/270 (0%)
Frame = +3
Query: 3 DAELAMRVLGQM--VGSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRV 176
D ELA+ VLG+M VG V P+ ATFNT+LS IP V LD +KELH F +RNV V G D V
Sbjct: 261 DVELALDVLGEMISVGGVGPNPATFNTMLSLIPFVPSLDRIKELHAFTLRNVEVVGFDSV 320
Query: 177 DEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFRE 356
D +RLWS IA+GYA HG M +ASRL+ +V LK QL NSMISGFL+S QT +AF FRE
Sbjct: 321 DIDRLWSSIASGYAF-HGCMSYASRLYREVTLKTFQLSNSMISGFLDSGQTHEAFDVFRE 379
Query: 357 MAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRK 536
MA +C REA+ LS VSLT++LP C +K+GLEIHAYA RRG++S TSV NALMAMY ++
Sbjct: 380 MAFQCCREAQSLSPVSLTMILPACDSLSKSGLEIHAYAYRRGMQSHTSVSNALMAMYAKR 439
Query: 537 GDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVL 716
GD+E +KVF + E+DVVSWNT+++S A +++FD AF+LFQ++LA G++PDEYS+SSVL
Sbjct: 440 GDRERADKVFQESPEKDVVSWNTMISSCAMTNDFDSAFDLFQELLADGIRPDEYSYSSVL 499
Query: 717 NGCGNSSYLRQGMALHGHMIKSGFSQSYPV 806
NGCG S++LRQGMALHG ++KSG SYPV
Sbjct: 500 NGCGISAHLRQGMALHGQIVKSGLYHSYPV 529
Score = 90.1 bits (222), Expect = 1e-16
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+H +A R G+ V + + A YA R G + A ++F++ K+ N+MI
Sbjct: 412 EIHAYAYRR-GMQSHTSVS-----NALMAMYAKR-GDRERADKVFQESPEKDVVSWNTMI 464
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKA--KTGLEIHAYAVR 476
S + D AF F+E+ A+ IR + S + +L C A + G+ +H V+
Sbjct: 465 SSCAMTNDFDSAFDLFQELLADGIRP----DEYSYSSVLNGCGISAHLRQGMALHGQIVK 520
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
GL S V NALM Y + G E +KVF +D +SWNTI++SY + A
Sbjct: 521 SGLYHSYPVVQNALMDAYGKCGCTEYAQKVFDEVDAKDTISWNTIISSYGFNTRPHEAIS 580
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGM 755
LF +M +G KP+ +F ++L+ C ++ + +G+
Sbjct: 581 LFHEMQELGFKPNRVTFIALLSACSHAGLIDKGL 614
>ref|XP_020080456.1| pentatricopeptide repeat-containing protein At4g21065-like [Ananas
comosus]
Length = 796
Score = 320 bits (821), Expect = e-101
Identities = 169/270 (62%), Positives = 207/270 (76%), Gaps = 2/270 (0%)
Frame = +3
Query: 3 DAELAMRVLGQM--VGSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRV 176
D ELA+ VLG+M VG V P+ ATFNTLLS IP V LD +KELH FA+RNV V G D V
Sbjct: 259 DVELALDVLGEMISVGGVGPNPATFNTLLSLIPFVPSLDRIKELHAFALRNVEVVGFDSV 318
Query: 177 DEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFRE 356
D +RLWS IA+GYA HG M +ASRL+ V LK SQL SMISGFL+S QT KAF FRE
Sbjct: 319 DIDRLWSSIASGYAF-HGCMSYASRLYHIVSLKTSQLSKSMISGFLDSGQTHKAFDVFRE 377
Query: 357 MAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRK 536
MA +C REA+ LS VSLT++LP C + +GLEIHAYA R G++S TSV NALMAMY R+
Sbjct: 378 MAFQCCREAQSLSPVSLTMILPACDSLSISGLEIHAYAYRGGMQSHTSVSNALMAMYARR 437
Query: 537 GDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVL 716
GD+E KVF + E+DVVSWNT+++S A +++FD AF+LFQ++LA ++PDEYS+SSVL
Sbjct: 438 GDRERAHKVFQESPEKDVVSWNTMISSCAMTNDFDSAFDLFQELLADCIRPDEYSYSSVL 497
Query: 717 NGCGNSSYLRQGMALHGHMIKSGFSQSYPV 806
NGCG S++LRQGMALHG ++KSG SYPV
Sbjct: 498 NGCGISAHLRQGMALHGQIVKSGLYHSYPV 527
Score = 94.7 bits (234), Expect = 3e-18
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+H +A R G+ V + + A YA R G + A ++F++ K+ N+MI
Sbjct: 410 EIHAYAYRG-GMQSHTSVS-----NALMAMYA-RRGDRERAHKVFQESPEKDVVSWNTMI 462
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKA--KTGLEIHAYAVR 476
S + D AF F+E+ A+CIR + S + +L C A + G+ +H V+
Sbjct: 463 SSCAMTNDFDSAFDLFQELLADCIRP----DEYSYSSVLNGCGISAHLRQGMALHGQIVK 518
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
GL S V NALM Y + G E +KVF +D +SWNTI++SY + A
Sbjct: 519 SGLYHSYPVVQNALMDAYGKCGCTEYAQKVFDEVDAKDTISWNTIISSYGFNTRPHEAIS 578
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGM 755
LF +M +G KP+ +F ++L+ C ++ + +G+
Sbjct: 579 LFHEMQELGFKPNRVTFIALLSACSHAGLIVKGL 612
>ref|XP_009392128.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610-like
[Musa acuminata subsp. malaccensis]
Length = 796
Score = 320 bits (821), Expect = e-101
Identities = 171/270 (63%), Positives = 205/270 (75%), Gaps = 2/270 (0%)
Frame = +3
Query: 3 DAELAMRVLGQMV--GSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRV 176
D ELA+ +LG+M+ GS +P++AT NTLL IP + LD LK LHGF+ RNV + VD
Sbjct: 271 DLELALGMLGEMLSSGSFKPNAATINTLLPLIPTIPALDSLKVLHGFSFRNVEIMDVDPA 330
Query: 177 DEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFRE 356
+RLWS IAAGYA HG MD+A+ LFEKVKLK SQL NSMISGFL Q +AF FRE
Sbjct: 331 GADRLWSAIAAGYAF-HGCMDYAACLFEKVKLKGSQLWNSMISGFLECEQVHEAFAVFRE 389
Query: 357 MAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRK 536
MA + EA+ LS+VSLTL+LPEC + K+GLEIHAYA RR +ES+TSV NALMAMY R+
Sbjct: 390 MAFQYGLEAEALSRVSLTLVLPECGELWKSGLEIHAYAYRRCVESNTSVSNALMAMYARR 449
Query: 537 GDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVL 716
GDKE+ EKVF E+DVVSWNT+VA Y +H+ D AFELF+QM+A G++PDE+SFSS L
Sbjct: 450 GDKEASEKVFQTITEKDVVSWNTMVAMYVMTHDTDGAFELFRQMIAEGVRPDEFSFSSAL 509
Query: 717 NGCGNSSYLRQGMALHGHMIKSGFSQSYPV 806
N C SSYLRQGMALHGHM+KSGF SY V
Sbjct: 510 NACACSSYLRQGMALHGHMVKSGFYCSYQV 539
Score = 84.7 bits (208), Expect = 8e-15
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Frame = +3
Query: 102 LWLDWLKELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNS 281
LW L E+H +A R + + + + A YA R G + + ++F+ + K+
Sbjct: 416 LWKSGL-EIHAYAYRRCVESNTS------VSNALMAMYA-RRGDKEASEKVFQTITEKDV 467
Query: 282 QLGNSMISGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKAKTGLEIH 461
N+M++ ++ + TD AF FR+M AE +R + S L C + G+ +H
Sbjct: 468 VSWNTMVAMYVMTHDTDGAFELFRQMIAEGVRPDEF--SFSSALNACACSSYLRQGMALH 525
Query: 462 AYAVRRGLE-SDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEF 638
+ V+ G S V N+LM Y + G E VF +DV+SWNT+++ S
Sbjct: 526 GHMVKSGFYCSYQVVQNSLMDAYGKCGCVEEARNVFEEISLKDVISWNTVISCCGFSAHP 585
Query: 639 DRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSSYL 743
A LF +M G KP+ +F ++L+ C ++ L
Sbjct: 586 QEAISLFSRMKEEGWKPNRVTFIALLSACSHAGLL 620
Score = 58.9 bits (141), Expect = 4e-06
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 10/256 (3%)
Frame = +3
Query: 48 VRPDSATFNTLLSAIP---DVLWLDWLKELHGFAVRNVGVAGVDRVDEE--RLWSVIAAG 212
++P S+T N +A+ D L L ++H +R +GVA R + RL+S
Sbjct: 44 LQPLSSTANATAAALDRCSDALSLREGAQIHARFLR-LGVAPDPRFSTQLLRLYSA---- 98
Query: 213 YAGRHGLMDWASRLFEKVKLKN-SQLG-NSMISGFLNSRQTDKAFGAFREMAAECIREAK 386
HG + A + + + S+L N +I + +S + A F EM +
Sbjct: 99 ----HGRLAAARAILDAIPRDALSRLAFNYVIRAYASSALAEPALDLFLEMLDSGLSP-- 152
Query: 387 ILSKVSLTLLLPECVQKA--KTGLEIHAYAVRRGL-ESDTSVGNALMAMYWRKGDKESVE 557
++ + +L C G +IHA V+ GL ++ +AL+ +Y +
Sbjct: 153 --NEFTFPFVLKSCALLGLLDLGRQIHAALVKTGLFVANVFCASALLDLYVKHAPFGDAC 210
Query: 558 KVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSS 737
++F R R+ V+WN+++ +YA + R+ E+ +M+ GL+ S++S++ GC
Sbjct: 211 QLFDRIHHRNEVTWNSMMTAYAQNGFLGRSLEMLDRMVDSGLEVGTSSWNSIVAGCVRYG 270
Query: 738 YLRQGMALHGHMIKSG 785
L + + G M+ SG
Sbjct: 271 DLELALGMLGEMLSSG 286
>ref|XP_010906580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
[Elaeis guineensis]
Length = 822
Score = 315 bits (806), Expect = 2e-98
Identities = 170/270 (62%), Positives = 202/270 (74%), Gaps = 2/270 (0%)
Frame = +3
Query: 3 DAELAMRVLGQMV--GSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRV 176
D EL++ +LG+M+ GS+ P+SATFNTLL IP + L LKELHGF +RN D V
Sbjct: 285 DVELSLEMLGEMMSSGSMEPNSATFNTLLPVIPAIPLLSRLKELHGFCLRNGQKVVADPV 344
Query: 177 DEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFRE 356
+RL S I AGYA HG MD AS LF VKLK SQL NSMISGFL+S QT +AF FRE
Sbjct: 345 AIDRLLSAITAGYAF-HGCMDCASALFSAVKLKTSQLWNSMISGFLDSGQTHQAFTIFRE 403
Query: 357 MAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRK 536
MA + + ++LS VSLT +LPEC Q K+GLEIHAYA R G+ES SV NALMAMY RK
Sbjct: 404 MAFQRGHQGQVLSIVSLTSVLPECGQILKSGLEIHAYAYRNGMESHLSVSNALMAMYARK 463
Query: 537 GDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVL 716
D+ S E+VF R E+DVVSWNT++ASYA +H+FD AFELFQQMLA ++PDEY+FSSVL
Sbjct: 464 RDRRSAERVFQRAPEKDVVSWNTMIASYAMTHDFDGAFELFQQMLAEDVRPDEYTFSSVL 523
Query: 717 NGCGNSSYLRQGMALHGHMIKSGFSQSYPV 806
NGCG+SSYLRQGM +HGH+IKSG QSY V
Sbjct: 524 NGCGSSSYLRQGMVVHGHLIKSGLCQSYLV 553
Score = 80.5 bits (197), Expect = 2e-13
Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+H +A RN G++ + + + A YA + A R+F++ K+ N+MI
Sbjct: 436 EIHAYAYRN----GME--SHLSVSNALMAMYARKRDRRS-AERVFQRAPEKDVVSWNTMI 488
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKA--KTGLEIHAYAVR 476
+ + + D AF F++M AE +R + + + +L C + + G+ +H + ++
Sbjct: 489 ASYAMTHDFDGAFELFQQMLAEDVRP----DEYTFSSVLNGCGSSSYLRQGMVVHGHLIK 544
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASY---AASHEFDR 644
GL +S V NALM Y + G E KVF +D +SWNTI++ A HE
Sbjct: 545 SGLCQSYLVVQNALMDAYGKCGSLEDAWKVFEEIDFKDRISWNTIISCCGFGACPHE--- 601
Query: 645 AFELFQQMLAVGLKPDEYSFSSVLNGCGNSSYL 743
AF LF M G KP+ +F ++L+ C ++ L
Sbjct: 602 AFSLFHSMQEQGCKPNRITFIALLSACSHAGLL 634
Score = 62.0 bits (149), Expect = 4e-07
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Frame = +3
Query: 291 NSMISGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYA 470
NS+I + +S + A F EM A +R + L + G ++HA
Sbjct: 137 NSLIRAYTSSSLHEPALHLFLEMLASGLRPNEFT--FPFVLKSSALLGFLDLGRQLHAML 194
Query: 471 VRRGLE-SDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRA 647
++ GL ++ +AL+ +Y + ++F R R+ V+WN+++++YA + ++
Sbjct: 195 LKTGLFLANVFCASALLDLYVKLAPLGEACRMFDRIPHRNAVTWNSMISAYAQNGFLEKG 254
Query: 648 FELFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGMALHGHMIKSG 785
EL M+ GL+ D S++S++ GC + + + G M+ SG
Sbjct: 255 LELLHTMVESGLEVDVSSWNSIIAGCVRLGDVELSLEMLGEMMSSG 300
Score = 60.8 bits (146), Expect = 9e-07
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +3
Query: 441 KTGLEIHAYAVRRGLESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVV--SWNTIVA 614
+ G +IHA +R L SD + L+ +Y G ++ + T + ++N+++
Sbjct: 82 REGAQIHARVLRLSLSSDHDLSARLLRLYAACGRPDAARALLDSTPPHLLTPFAYNSLIR 141
Query: 615 SYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGMALHGHMIKSG 785
+Y +S + A LF +MLA GL+P+E++F VL +L G LH ++K+G
Sbjct: 142 AYTSSSLHEPALHLFLEMLASGLRPNEFTFPFVLKSSALLGFLDLGRQLHAMLLKTG 198
>ref|XP_020699418.1| pentatricopeptide repeat-containing protein At4g21065-like
[Dendrobium catenatum]
ref|XP_020699419.1| pentatricopeptide repeat-containing protein At4g21065-like
[Dendrobium catenatum]
gb|PKU73788.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 815
Score = 305 bits (781), Expect = 1e-94
Identities = 152/268 (56%), Positives = 201/268 (75%), Gaps = 2/268 (0%)
Frame = +3
Query: 9 ELAMRVLGQMVGS--VRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRVDE 182
ELA+ +LG+MV + V ++ATFNTLL IP + L+WLKE HGFA++ V + + VD+
Sbjct: 284 ELALEILGEMVSTSTVSLNAATFNTLLPVIPKIPSLNWLKEFHGFALKKVEITEMTLVDK 343
Query: 183 ERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMA 362
+RLWS + A Y+ HGLMD+A RLFE V L+N L S+I+G + +AF FR+M
Sbjct: 344 DRLWSALTASYSF-HGLMDYACRLFESVNLRNPHLWISIINGLFKCSRAHEAFDVFRKMT 402
Query: 363 AECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRKGD 542
A C+ +A+ LS+ SL+L+LPEC +KTGLE+H YA+R+ LES TSVGNALMAMY +KGD
Sbjct: 403 ALCLHDAQTLSRTSLSLILPECFPMSKTGLEVHGYAIRKCLESSTSVGNALMAMYAKKGD 462
Query: 543 KESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNG 722
ES +F R +E+D+VSWNT+ ASY+A+H+FD+ ELFQ MLA +KPDEYSFSSVL+G
Sbjct: 463 MESTLNIFERLLEKDIVSWNTMAASYSAAHDFDKEIELFQCMLAQEIKPDEYSFSSVLSG 522
Query: 723 CGNSSYLRQGMALHGHMIKSGFSQSYPV 806
CG+S++LRQ ALHG MIKSGFSQS+ V
Sbjct: 523 CGHSTHLRQATALHGRMIKSGFSQSFMV 550
Score = 85.5 bits (210), Expect = 5e-15
Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+HG+A+R + + + + A YA + G M+ +FE++ K+ N+M
Sbjct: 433 EVHGYAIRKCLESSTS------VGNALMAMYA-KKGDMESTLNIFERLLEKDIVSWNTMA 485
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKA--KTGLEIHAYAVR 476
+ + + DK F+ M A+ I+ + S + +L C + +H ++
Sbjct: 486 ASYSAAHDFDKEIELFQCMLAQEIKP----DEYSFSSVLSGCGHSTHLRQATALHGRMIK 541
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
G +S V NALM Y + G V KVF D++SWNTI++SY S A
Sbjct: 542 SGFSQSFMVVQNALMDAYGKCGCTVDVRKVFEEMDFCDIISWNTIISSYGFSDRPQEALL 601
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGMALHGHMIK 779
LF++M A GLKP+ +F ++L+ C ++ L++G+ M K
Sbjct: 602 LFEEMKAEGLKPNRVTFIALLSACSHAGMLKEGLEFFETMSK 643
Score = 57.8 bits (138), Expect = 9e-06
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Frame = +3
Query: 393 SKVSLTLLLPECVQKA--KTGLEIHAYAVRRGLES--DTSVGNALMAMYWRKGDKESVEK 560
S SLT++L +C K + GL+IHA +R GL + D V L+ +Y G +
Sbjct: 60 SPSSLTVVLEQCTAKGSLREGLQIHARLLRLGLLACDDPQVFQHLLFLYSSAGRPDCAAA 119
Query: 561 VFGRTIERDVV--SWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNS 734
+ + S+NT++ AA+ + A +LF ML GL+P+E++F VL
Sbjct: 120 ILCLIPSHVLTTFSFNTVIRDLAAAFP-EHAVDLFLDMLVAGLRPNEFTFPFVLRSSSLL 178
Query: 735 SYLRQGMALHGHMIKSG 785
G LH M+K G
Sbjct: 179 GLFFLGRQLHSQMLKYG 195
>ref|XP_020574222.1| putative pentatricopeptide repeat-containing protein At5g09950
[Phalaenopsis equestris]
Length = 532
Score = 275 bits (704), Expect = 4e-86
Identities = 144/270 (53%), Positives = 199/270 (73%), Gaps = 2/270 (0%)
Frame = +3
Query: 3 DAELAMRVLGQMVG--SVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRV 176
+ ELA +L +MV ++ ++ATFNTLL IP++ L+ LKELHGFA+R + + + V
Sbjct: 244 NVELAWEILVEMVSRSAMSMNAATFNTLLPVIPEIP-LNSLKELHGFALRKLEITEMTLV 302
Query: 177 DEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFRE 356
D++RL S + AGY+ HGLMD+A RLF+ + LK+ L S+ISG + D+AF FRE
Sbjct: 303 DKDRLLSALTAGYS-IHGLMDYAFRLFDSLNLKSPHLWISIISGLFTCNRADEAFVVFRE 361
Query: 357 MAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRK 536
M++ C++ A+ LS+ SL+LLL EC +KTGLEIH YAVR+ L+S TSVGNALMAMY +K
Sbjct: 362 MSSLCVQAAQTLSRTSLSLLLSECSPTSKTGLEIHGYAVRKCLDSSTSVGNALMAMYSKK 421
Query: 537 GDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVL 716
GD +S K+F + +E+DVVSWNT+ A+Y+A+H+ D+AFELFQ MLA ++PDE+SFSS+L
Sbjct: 422 GDMDSTLKIFEKILEKDVVSWNTMAATYSAAHDVDKAFELFQCMLAEEIEPDEFSFSSIL 481
Query: 717 NGCGNSSYLRQGMALHGHMIKSGFSQSYPV 806
CG+S++L Q LHG MIKSG SQS+ V
Sbjct: 482 KSCGHSTHLVQATTLHGRMIKSGVSQSFMV 511
>gb|PKA54108.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 805
Score = 276 bits (707), Expect = 6e-84
Identities = 144/267 (53%), Positives = 190/267 (71%), Gaps = 1/267 (0%)
Frame = +3
Query: 9 ELAMRVLGQMVGSVRP-DSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRVDEE 185
ELA +L +M S ++ATFNTLL IPD+ L+WLKE H F VR + ++ +D +
Sbjct: 285 ELAFHILEEMASSAMSMNTATFNTLLPVIPDIPSLNWLKEFHAFVVRKLETTQMNPIDTD 344
Query: 186 RLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMAA 365
RL S + +GY H LMD+ASRLFE V+ K+ L SMISGFL+ ++ ++AF FREMAA
Sbjct: 345 RLLSAVTSGYC-LHRLMDYASRLFETVRSKSPHLCTSMISGFLDCKRINEAFRLFREMAA 403
Query: 366 ECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRKGDK 545
C E K +S+ LT +LPEC +K GLEIHAY +R+GL+S TS+GNALMAMY ++ D+
Sbjct: 404 RCGFEVKTISRACLTSILPECSSMSKHGLEIHAYVIRKGLDSSTSIGNALMAMYAKRDDR 463
Query: 546 ESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGC 725
ES+ K+F R IE+D+VSWNT+ AA+H+ D+AFELFQQMLA G +PDE+SFSSVLN C
Sbjct: 464 ESICKIFQRIIEKDLVSWNTM----AAAHDCDQAFELFQQMLAEGFEPDEFSFSSVLNAC 519
Query: 726 GNSSYLRQGMALHGHMIKSGFSQSYPV 806
G SS+ +LHG M+KSGF S+ V
Sbjct: 520 GLSSHFLHVTSLHGRMVKSGFFPSFVV 546
Score = 75.1 bits (183), Expect = 2e-11
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+H + +R G+D + + + A YA R + ++F+++ K+ N+M
Sbjct: 433 EIHAYVIRK----GLD--SSTSIGNALMAMYAKRDD-RESICKIFQRIIEKDLVSWNTMA 485
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKAKT--GLEIHAYAVR 476
+ + D+AF F++M AE + S + +L C + +H V+
Sbjct: 486 A----AHDCDQAFELFQQMLAEGFEP----DEFSFSSVLNACGLSSHFLHVTSLHGRMVK 537
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
G S V NALM Y + G +K F T D++SWNTI++ Y S AF
Sbjct: 538 SGFFPSFVVVQNALMDAYGKCGCICDAKKTFDETDLVDIISWNTIISCYGFSDAPKAAFL 597
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGM 755
LFQ+M A GLKP+ +F S+L+ C ++ L +G+
Sbjct: 598 LFQKMKASGLKPNRVTFVSLLSACSHAGMLDEGL 631
>gb|OVA03451.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 681
Score = 271 bits (693), Expect = 6e-83
Identities = 149/271 (54%), Positives = 193/271 (71%), Gaps = 3/271 (1%)
Frame = +3
Query: 3 DAELAMRVLGQMVGS---VRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDR 173
D ELA L +M+ S V+P+SATFNTLL IP + L LKELHGFAVR + G D
Sbjct: 146 DVELAFETLRRMLVSEFPVKPNSATFNTLLPVIPTEVSLVNLKELHGFAVRQKEMIGFDA 205
Query: 174 VDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFR 353
VD+ERL S IA+GYA R G + +A RLF+ ++LK SQL SMISGF+NS+Q+ AF FR
Sbjct: 206 VDDERLCSSIASGYAYR-GCIAYAYRLFDGIRLKISQLWISMISGFINSKQSRVAFQVFR 264
Query: 354 EMAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWR 533
+M +C + K LSKV LTLLLPEC + TGLEIH +A R G ES+TSV NAL+AMY R
Sbjct: 265 DMVIQCGGDLKNLSKVPLTLLLPECSPSSLTGLEIHGHAYRVGFESNTSVNNALIAMYAR 324
Query: 534 KGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSV 713
+GD ES E+VF RT ++DVVSWN+++ S+ +++FD+A +LF QM + KPD+++FSSV
Sbjct: 325 RGDIESSERVFSRTPDKDVVSWNSMLYSFTINNDFDQAIKLFHQMHSEDTKPDKFTFSSV 384
Query: 714 LNGCGNSSYLRQGMALHGHMIKSGFSQSYPV 806
LNGCG RQG HG++I+SGF + Y V
Sbjct: 385 LNGCGELGAHRQGTVAHGYIIRSGFFEGYCV 415
Score = 87.4 bits (215), Expect = 1e-15
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+HG A R VG V+ + + A YA R G ++ + R+F + K+ NSM+
Sbjct: 298 EIHGHAYR-VGFESNTSVN-----NALIAMYA-RRGDIESSERVFSRTPDKDVVSWNSML 350
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKA--KTGLEIHAYAVR 476
F + D+A F +M +E + K + + +L C + + G H Y +R
Sbjct: 351 YSFTINNDFDQAIKLFHQMHSEDTKP----DKFTFSSVLNGCGELGAHRQGTVAHGYIIR 406
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
G E V NALM MY + G E KVF +RD VSWNTI+ SY + A
Sbjct: 407 SGFFEGYCVVQNALMDMYGKCGCIEEARKVFDEMEDRDDVSWNTIIKSYGLNAHPHEAIS 466
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGM 755
LF +M G +P+ +F ++L+ C + + +G+
Sbjct: 467 LFYEMQEQGRRPNRITFIALLSACSHGGLIDEGL 500
>ref|XP_010234581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Brachypodium distachyon]
gb|KQJ96025.1| hypothetical protein BRADI_3g20480v3 [Brachypodium distachyon]
Length = 698
Score = 262 bits (669), Expect = 3e-79
Identities = 138/268 (51%), Positives = 181/268 (67%), Gaps = 2/268 (0%)
Frame = +3
Query: 3 DAELAMRVLGQMVGS--VRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRV 176
DAELA+++LG+MV + V P++ATFNTLL I + +D +KELH F +RN V G V
Sbjct: 180 DAELAVQLLGEMVSAPGVAPNAATFNTLLHVIAALRHVDVVKELHAFVLRNAEVVGFGPV 239
Query: 177 DEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFRE 356
D +RLW +AAGY R +A R+F V++ LGN M+SGFLNS Q +AF FRE
Sbjct: 240 DLDRLWESLAAGYM-RSCCAAYAGRVFRDVRVSTCHLGNLMVSGFLNSGQHSQAFDVFRE 298
Query: 357 MAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRK 536
MA C +A+ L VSLTL+LPE K GLEIHAYA R G E DTSV NALM MY ++
Sbjct: 299 MAFSCASQAQHLPTVSLTLVLPEVHPATKRGLEIHAYAYRHGFECDTSVCNALMVMYAKR 358
Query: 537 GDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVL 716
+ +S +K+F + +D VSWNT+++S+A H+FD AF+LF++M +KPDEY+F+SVL
Sbjct: 359 DNIDSADKIFQALLNKDTVSWNTMISSHAVVHDFDLAFKLFREMQHNYIKPDEYTFTSVL 418
Query: 717 NGCGNSSYLRQGMALHGHMIKSGFSQSY 800
N C + YLRQ MALHG M+K G SY
Sbjct: 419 NACSFACYLRQAMALHGQMLKMGLCHSY 446
Score = 76.6 bits (187), Expect = 4e-12
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 3/217 (1%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+H +A R+ G + + + + + YA R + D A ++F+ + K++ N+MI
Sbjct: 331 EIHAYAYRH----GFEC--DTSVCNALMVMYAKRDNI-DSADKIFQALLNKDTVSWNTMI 383
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKA--KTGLEIHAYAVR 476
S D AF FREM I+ + + T +L C + + +H ++
Sbjct: 384 SSHAVVHDFDLAFKLFREMQHNYIKP----DEYTFTSVLNACSFACYLRQAMALHGQMLK 439
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
GL S N+LM Y + G E +KVF T +D +SWN I++ Y S +A +
Sbjct: 440 MGLCHSYLDDMNSLMDAYGKCGSIEDAQKVFDETDRKDTISWNVIISCYGYSASPQQAIQ 499
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGMALH 764
F QM G +P+ +F ++L C ++ L + ALH
Sbjct: 500 RFHQMQDQGYRPNRVTFIALLAACSHAGLLDE--ALH 534
>gb|PIA42397.1| hypothetical protein AQUCO_02000090v1 [Aquilegia coerulea]
Length = 813
Score = 253 bits (646), Expect = 5e-75
Identities = 135/267 (50%), Positives = 184/267 (68%), Gaps = 3/267 (1%)
Frame = +3
Query: 3 DAELAMRVLGQMVGS---VRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDR 173
D LA L +M S ++P+SATFNTLLS IP + L LKELHGFA++ + G+D
Sbjct: 293 DGVLAFETLRRMSVSGLALKPNSATFNTLLSVIPTDVPLILLKELHGFAIKQQDIIGMDS 352
Query: 174 VDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFR 353
+D +RL S I +GYA HG MD+AS+LF+ + LK SQL SMISGF+ ++ ++AF FR
Sbjct: 353 IDSDRLRSSIVSGYAF-HGCMDYASQLFKGICLKTSQLWISMISGFIQCKKINEAFRVFR 411
Query: 354 EMAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWR 533
+M +C E K LSKV LTLLLPEC + TGLEIHA+A R G ES+TSV NAL+AMY R
Sbjct: 412 DMIIQCGGEFKTLSKVPLTLLLPECSASSLTGLEIHAHAYRVGFESNTSVSNALIAMYGR 471
Query: 534 KGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSV 713
+ E E+VF R E+DV+SWNT+++ Y +++ +A F +M + G+ PDE+++SSV
Sbjct: 472 RDKIEWSERVFTRAPEKDVISWNTMISGYVNNNDSVKALTYFDRMRSEGIHPDEFTYSSV 531
Query: 714 LNGCGNSSYLRQGMALHGHMIKSGFSQ 794
L+ CG RQG+ +HGH+IK GFS+
Sbjct: 532 LSACGEMGAHRQGLGMHGHIIKGGFSE 558
Score = 81.6 bits (200), Expect = 9e-14
Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Frame = +3
Query: 219 GRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMAAECIREAKILSK 398
GR ++W+ R+F + K+ N+MISG++N+ + KA F M +E I +
Sbjct: 470 GRRDKIEWSERVFTRAPEKDVISWNTMISGYVNNNDSVKALTYFDRMRSEGIHP----DE 525
Query: 399 VSLTLLLPECVQKA--KTGLEIHAYAVRRGL-ESDTSVGNALMAMYWRKGDKESVEKVFG 569
+ + +L C + + GL +H + ++ G E V N+L+ MY + G + +F
Sbjct: 526 FTYSSVLSACGEMGAHRQGLGMHGHIIKGGFSEGCLVVQNSLVDMYAKCGCVDDARNLFD 585
Query: 570 RTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQ 749
+D +SWNT+++ Y + AF LF +M G P+ +F ++L+ C ++ + +
Sbjct: 586 EIKWKDDISWNTMISCYGINDFPHEAFALFDEMRGQGWTPNRVTFIALLSACSHAGLVDE 645
Query: 750 GM 755
G+
Sbjct: 646 GL 647
Score = 66.2 bits (160), Expect = 1e-08
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Frame = +3
Query: 417 LPECVQ--KAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRKGDKESVEKVFGRT-IE-R 584
L EC + G++IHA+ + GL D + + L+ Y GD ++ ++ T I+
Sbjct: 81 LEECAATYSFEVGIQIHAHLIHLGLYKDVYLSSKLLYFYCSNGDVDAARLIYDNTPIDCL 140
Query: 585 DVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGMALH 764
++ WN ++ +Y ++ A ELF +M +G P+E+++ VL C + +H
Sbjct: 141 NLYFWNNMIRTYVDCLRYNDAVELFVEMWGLGFCPNEFTYPFVLKSCSVLGLVELAREIH 200
Query: 765 GHMIKSGFSQ 794
G MI +G+ Q
Sbjct: 201 GLMIVNGYQQ 210
>ref|XP_006660042.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Oryza brachyantha]
Length = 700
Score = 246 bits (628), Expect = 3e-73
Identities = 129/268 (48%), Positives = 177/268 (66%), Gaps = 2/268 (0%)
Frame = +3
Query: 3 DAELAMRVLGQMV--GSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRV 176
+ LA+ +LG+MV G V P+ ATFNTLL + + D L+ELHGF +RN + G V
Sbjct: 184 EGALAVSLLGEMVSAGGVMPNVATFNTLLHVVAVLEGADVLRELHGFVLRNTRIVGFGHV 243
Query: 177 DEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFRE 356
D +RLW +AAGY R +++A R+F+ V++ LGN MISGFLNS Q +AF FRE
Sbjct: 244 DLDRLWESLAAGYM-RSCCVEYADRVFQDVRMSTCHLGNLMISGFLNSGQRKQAFDVFRE 302
Query: 357 MAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRK 536
MA C +++ L +SL+++LPE K GLEIHAYA R G E DTSV NALMAMY +
Sbjct: 303 MAFGCGHQSQHLPTISLSMVLPEVDLATKRGLEIHAYAYRHGFECDTSVCNALMAMYAKG 362
Query: 537 GDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVL 716
G+ + +F ++D VSWNT+++SYAA H++D +F+LF++M ++PDEY+F+ VL
Sbjct: 363 GNIYLADIIFQGLADKDAVSWNTMISSYAAIHDYDVSFKLFREMQRNAVRPDEYTFTMVL 422
Query: 717 NGCGNSSYLRQGMALHGHMIKSGFSQSY 800
N C + YL Q MALHG M+K G SY
Sbjct: 423 NACSFACYLGQSMALHGQMMKMGLCDSY 450
Score = 80.1 bits (196), Expect = 3e-13
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 3/210 (1%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+H +A R+ G + + + + + A YA + G + A +F+ + K++ N+MI
Sbjct: 335 EIHAYAYRH----GFEC--DTSVCNALMAMYA-KGGNIYLADIIFQGLADKDAVSWNTMI 387
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKAKTG--LEIHAYAVR 476
S + D +F FREM +R + + T++L C G + +H ++
Sbjct: 388 SSYAAIHDYDVSFKLFREMQRNAVRP----DEYTFTMVLNACSFACYLGQSMALHGQMMK 443
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
GL +S N+LM+ Y + G E+ +KVF T +DV+SWN I++ Y S +A
Sbjct: 444 MGLCDSYVDDMNSLMSAYGKCGLLEAAQKVFDETNPKDVISWNIIISCYGYSALPWQAIP 503
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSYL 743
LF QM G KP +F +VL+ C ++ L
Sbjct: 504 LFHQMQDEGYKPTRVTFIAVLSACSHAGLL 533
>gb|ONM40418.1| Pentatricopeptide (PPR) repeat-containing protein-like [Zea mays]
Length = 552
Score = 231 bits (590), Expect = 6e-69
Identities = 131/268 (48%), Positives = 170/268 (63%), Gaps = 2/268 (0%)
Frame = +3
Query: 3 DAELAMRVLGQMV--GSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRV 176
+ ELA+ +LG+MV G V P ATFNT+L I + ++ L+ELH F +RN V G+ V
Sbjct: 28 NGELAIELLGKMVSVGGVVPSVATFNTVLHVISALRGVNVLRELHAFVLRNAEVVGLGPV 87
Query: 177 DEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFRE 356
D +RL +AAGY + +A R+F V++ LGN MISGFL++ Q ++A G RE
Sbjct: 88 DLDRLQESLAAGYMCS-SCVQYAGRVFRDVRISTCFLGNLMISGFLDTGQRNQALGVLRE 146
Query: 357 MAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRK 536
MA C EA+ L SLTL+LPE K GLEIHAYA R G E DTSV NALMAMY R
Sbjct: 147 MAFGCGHEAQHLPSASLTLVLPEVNLATKRGLEIHAYAYRHGFECDTSVCNALMAMYARG 206
Query: 537 GDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVL 716
G +KVF +DVVSWNT+++ YA H+FD +FELF++M G +PD+Y+F+SVL
Sbjct: 207 GKICRSDKVFQGLDAKDVVSWNTMISGYATVHDFDLSFELFREMQRNGTRPDDYTFTSVL 266
Query: 717 NGCGNSSYLRQGMALHGHMIKSGFSQSY 800
N C + R MALHG MI+ G SY
Sbjct: 267 NACSFACNHRTVMALHGQMIRMGLCHSY 294
Score = 78.2 bits (191), Expect = 1e-12
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 7/222 (3%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+H +A R+ G + + + + + A YA R G + + ++F+ + K+ N+MI
Sbjct: 179 EIHAYAYRH----GFEC--DTSVCNALMAMYA-RGGKICRSDKVFQGLDAKDVVSWNTMI 231
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPEC--VQKAKTGLEIHAYAVR 476
SG+ D +F FREM R + T +L C +T + +H +R
Sbjct: 232 SGYATVHDFDLSFELFREMQRNGTRP----DDYTFTSVLNACSFACNHRTVMALHGQMIR 287
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
GL S N+LM Y + G +K+F T +D VSWN I++ Y S RA
Sbjct: 288 MGLCHSYVDDMNSLMDAYGKCGFIAEAQKIFDETERKDTVSWNIIISCYGYSGFPQRAIR 347
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSY----LRQGMALHG 767
LF QM KP +F +VL C ++ LR A+HG
Sbjct: 348 LFHQMQDQSYKPTRVTFIAVLAACSHAGLVDEALRYFEAMHG 389
>ref|XP_002458168.1| pentatricopeptide repeat-containing protein At4g21065 [Sorghum
bicolor]
gb|EES03288.1| hypothetical protein SORBI_3003G223000 [Sorghum bicolor]
Length = 694
Score = 234 bits (596), Expect = 1e-68
Identities = 132/268 (49%), Positives = 173/268 (64%), Gaps = 2/268 (0%)
Frame = +3
Query: 3 DAELAMRVLGQMV--GSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRV 176
+ ELA+ +LG+MV G V P+ ATFNT+L I + +D L+ELH F +RN V G+ V
Sbjct: 168 NGELAIELLGKMVSIGGVVPNVATFNTVLHVISVLRGVDVLRELHAFVLRNAEVVGLGPV 227
Query: 177 DEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFRE 356
D +RL +AAGY + +A R+F V++ LGN MISGFL++ Q ++A G FRE
Sbjct: 228 DLDRLQESLAAGYMCS-SFVQYAGRVFRDVRITTCFLGNLMISGFLDTGQRNQALGVFRE 286
Query: 357 MAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRK 536
MA C EA+ L VSLTL+LPE K GLEIHAYA R G E DTSV NALMAMY ++
Sbjct: 287 MAFGCGYEARHLPSVSLTLVLPEVNLATKRGLEIHAYAYRHGFECDTSVCNALMAMYAKR 346
Query: 537 GDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVL 716
K+F +DVVSWNT+++SYAA H+FD +FELF++M +PD+Y+F+SVL
Sbjct: 347 DKICLAYKIFQGLDNKDVVSWNTMISSYAAVHDFDLSFELFREMQRNDTRPDDYTFTSVL 406
Query: 717 NGCGNSSYLRQGMALHGHMIKSGFSQSY 800
N C + R MALHG MI+ G SY
Sbjct: 407 NACSFTCNHRTVMALHGQMIRMGLCHSY 434
Score = 73.2 bits (178), Expect = 7e-11
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 3/217 (1%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+H +A R+ G + + + + + A YA R + A ++F+ + K+ N+MI
Sbjct: 319 EIHAYAYRH----GFEC--DTSVCNALMAMYAKRDKIC-LAYKIFQGLDNKDVVSWNTMI 371
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPEC--VQKAKTGLEIHAYAVR 476
S + D +F FREM R + T +L C +T + +H +R
Sbjct: 372 SSYAAVHDFDLSFELFREMQRNDTRP----DDYTFTSVLNACSFTCNHRTVMALHGQMIR 427
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
GL S N+LM Y + G + + +F T +D +SWN I++ Y S +A
Sbjct: 428 MGLCHSYVDDMNSLMDAYGKCGFIDEAQNIFDETDRKDTISWNIIISCYGYSGFPQQAIR 487
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGMALH 764
LF QM G KP +F SVL C ++ + + ALH
Sbjct: 488 LFHQMQDQGYKPTRVTFISVLAACSHAGLVDE--ALH 522
>ref|XP_008675350.1| pentatricopeptide repeat-containing protein At4g16470 [Zea mays]
gb|ONM40419.1| Pentatricopeptide (PPR) repeat-containing protein-like [Zea mays]
Length = 696
Score = 231 bits (590), Expect = 1e-67
Identities = 131/268 (48%), Positives = 170/268 (63%), Gaps = 2/268 (0%)
Frame = +3
Query: 3 DAELAMRVLGQMV--GSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRV 176
+ ELA+ +LG+MV G V P ATFNT+L I + ++ L+ELH F +RN V G+ V
Sbjct: 172 NGELAIELLGKMVSVGGVVPSVATFNTVLHVISALRGVNVLRELHAFVLRNAEVVGLGPV 231
Query: 177 DEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFRE 356
D +RL +AAGY + +A R+F V++ LGN MISGFL++ Q ++A G RE
Sbjct: 232 DLDRLQESLAAGYMCS-SCVQYAGRVFRDVRISTCFLGNLMISGFLDTGQRNQALGVLRE 290
Query: 357 MAAECIREAKILSKVSLTLLLPECVQKAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRK 536
MA C EA+ L SLTL+LPE K GLEIHAYA R G E DTSV NALMAMY R
Sbjct: 291 MAFGCGHEAQHLPSASLTLVLPEVNLATKRGLEIHAYAYRHGFECDTSVCNALMAMYARG 350
Query: 537 GDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVL 716
G +KVF +DVVSWNT+++ YA H+FD +FELF++M G +PD+Y+F+SVL
Sbjct: 351 GKICRSDKVFQGLDAKDVVSWNTMISGYATVHDFDLSFELFREMQRNGTRPDDYTFTSVL 410
Query: 717 NGCGNSSYLRQGMALHGHMIKSGFSQSY 800
N C + R MALHG MI+ G SY
Sbjct: 411 NACSFACNHRTVMALHGQMIRMGLCHSY 438
Score = 78.2 bits (191), Expect = 1e-12
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 7/222 (3%)
Frame = +3
Query: 123 ELHGFAVRNVGVAGVDRVDEERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMI 302
E+H +A R+ G + + + + + A YA R G + + ++F+ + K+ N+MI
Sbjct: 323 EIHAYAYRH----GFEC--DTSVCNALMAMYA-RGGKICRSDKVFQGLDAKDVVSWNTMI 375
Query: 303 SGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPEC--VQKAKTGLEIHAYAVR 476
SG+ D +F FREM R + T +L C +T + +H +R
Sbjct: 376 SGYATVHDFDLSFELFREMQRNGTRP----DDYTFTSVLNACSFACNHRTVMALHGQMIR 431
Query: 477 RGL-ESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFE 653
GL S N+LM Y + G +K+F T +D VSWN I++ Y S RA
Sbjct: 432 MGLCHSYVDDMNSLMDAYGKCGFIAEAQKIFDETERKDTVSWNIIISCYGYSGFPQRAIR 491
Query: 654 LFQQMLAVGLKPDEYSFSSVLNGCGNSSY----LRQGMALHG 767
LF QM KP +F +VL C ++ LR A+HG
Sbjct: 492 LFHQMQDQSYKPTRVTFIAVLAACSHAGLVDEALRYFEAMHG 533
>gb|KMZ69418.1| hypothetical protein ZOSMA_214G00060 [Zostera marina]
Length = 726
Score = 225 bits (573), Expect = 5e-65
Identities = 129/267 (48%), Positives = 172/267 (64%), Gaps = 11/267 (4%)
Frame = +3
Query: 36 MVGSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRVDEERLWSVIAAGY 215
M ++P ATFNTLL IPD+ +KELHG+ R++ V + VDE+RL S IA Y
Sbjct: 213 MTRDMKPSPATFNTLLPVIPDMGHR--IKELHGYVTRHLDVIDISSVDEDRLRSAIATSY 270
Query: 216 AGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMAAECIREAKILS 395
A + MD A RLF+ ++N+QL ++ISGFL +R AF FRE AA ++K++S
Sbjct: 271 A-KTQYMDHACRLFQSTTVRNNQLYVALISGFLITRNIRAAFEIFREAAARSSNDSKVMS 329
Query: 396 KVSLTLLLPECVQKAKT-----GLEIHAYAVRRGLESDTSVGNALMAMYWRK---GDKES 551
K+ LT++LP C + T GLEIHAYA R LES TSV NAL+AMY RK G K +
Sbjct: 330 KIMLTVILPRCDDDSGTRLFKHGLEIHAYAYRHHLESHTSVSNALIAMYARKRGQGGKNA 389
Query: 552 V---EKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNG 722
E+VF T+ RDV++WNTIV++ +FDRA LF+QM++ ++PD YSF SVLN
Sbjct: 390 AAKAERVFEMTVNRDVITWNTIVSTNVCYGDFDRALSLFRQMISEEVRPDVYSFGSVLNA 449
Query: 723 CGNSSYLRQGMALHGHMIKSGFSQSYP 803
CG+SS L QGM+LH +IK+G S P
Sbjct: 450 CGHSSSLLQGMSLHCRIIKTGLFSSEP 476
Score = 83.6 bits (205), Expect = 2e-14
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
Frame = +3
Query: 243 ASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLP 422
A R+FE ++ N+++S + D+A FR+M +E +R S +L
Sbjct: 393 AERVFEMTVNRDVITWNTIVSTNVCYGDFDRALSLFRQMISEEVRP----DVYSFGSVLN 448
Query: 423 ECVQKAKT--GLEIHAYAVRRGLESDTS----VGNALMAMYWRKGDKESVEKVFGRTIER 584
C + G+ +H ++ GL S V NA++ MY + G E K F E+
Sbjct: 449 ACGHSSSLLQGMSLHCRIIKTGLFSSEPGCPVVDNAVVDMYAKCGSTECARKAFDEIEEK 508
Query: 585 DVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGMALH 764
D++SWNT+++ YA + D+AF LF QM G PD +F +L C +S + + +
Sbjct: 509 DIISWNTVISMYAYNACPDKAFSLFSQMKDQGFTPDRITFIGILTACSHSGSVNEALEYF 568
Query: 765 GHM 773
+M
Sbjct: 569 KNM 571
>ref|XP_020529674.1| pentatricopeptide repeat-containing protein At4g21300 [Amborella
trichopoda]
ref|XP_011627322.2| pentatricopeptide repeat-containing protein At4g21300 [Amborella
trichopoda]
Length = 570
Score = 171 bits (433), Expect = 8e-46
Identities = 108/272 (39%), Positives = 157/272 (57%), Gaps = 10/272 (3%)
Frame = +3
Query: 3 DAELAMRVLGQMVG-SVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRVD 179
+AEL + M SV+P+ T NT+L +P LD +E+H F +RN +
Sbjct: 54 NAELVLECFALMSSASVKPNLNTLNTILPLLPTFASLDHCREIHCFVIRN-------GIP 106
Query: 180 EERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREM 359
+ + SV+ YA H MD A R+FE ++LK++ + N+MI+GF++ + D+AF
Sbjct: 107 DHGIVSVLVILYA-HHCCMDCALRVFEDIQLKSTAVWNTMIAGFVDINRLDQAF------ 159
Query: 360 AAECIREAKILS-----KVSLTLLLPEC----VQKAKTGLEIHAYAVRRGLESDTSVGNA 512
E +RE K LS + +LTLLLPE Q +K G IHAY R GLE DTSV NA
Sbjct: 160 --EMVREMKRLSSERPDRSTLTLLLPELHRLGTQASKLGDCIHAYTYRNGLELDTSVFNA 217
Query: 513 LMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPD 692
L+AMY R E KVF RT +D+VSWNT++++Y S F++AF LF +M +PD
Sbjct: 218 LVAMYGRSRRIEISRKVFERTQGKDIVSWNTMLSNYVNSGYFNQAFHLFSRMHTEDARPD 277
Query: 693 EYSFSSVLNGCGNSSYLRQGMALHGHMIKSGF 788
E++ SVL CG+ + ++ G ++H + K GF
Sbjct: 278 EFTIPSVLQSCGHFASVQGGSSVHAYAFKGGF 309
Score = 96.7 bits (239), Expect = 6e-19
Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 7/246 (2%)
Frame = +3
Query: 39 VGSVRPDSATFNTLLSAIPDVLWLDWLKE-----LHGFAVRNVGVAGVDRVDEERLWSVI 203
+ S RPD +T LL P++ L +H + RN G++ + +++ +
Sbjct: 168 LSSERPDRSTLTLLL---PELHRLGTQASKLGDCIHAYTYRN----GLEL--DTSVFNAL 218
Query: 204 AAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMAAECIREA 383
A Y GR ++ + ++FE+ + K+ N+M+S ++NS ++AF F M E R
Sbjct: 219 VAMY-GRSRRIEISRKVFERTQGKDIVSWNTMLSNYVNSGYFNQAFHLFSRMHTEDARP- 276
Query: 384 KILSKVSLTLLLPECVQKAKT--GLEIHAYAVRRGLESDTSVGNALMAMYWRKGDKESVE 557
+ ++ +L C A G +HAYA + G D V N+L+ MY + G E E
Sbjct: 277 ---DEFTIPSVLQSCGHFASVQGGSSVHAYAFKGGFIDDLCVENSLIDMYGKCGFVEFAE 333
Query: 558 KVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSS 737
KVF +RD VSWN +++ YAA+ + LF+ M G +P+ +F ++L+ C
Sbjct: 334 KVFREMRQRDFVSWNAMISCYAANKHPNETLSLFESMQNQGWRPNGVTFVAILSACSRGG 393
Query: 738 YLRQGM 755
++ Q +
Sbjct: 394 FVDQSL 399
>gb|ERN16632.1| hypothetical protein AMTR_s00051p00085060 [Amborella trichopoda]
Length = 654
Score = 171 bits (433), Expect = 2e-45
Identities = 108/272 (39%), Positives = 157/272 (57%), Gaps = 10/272 (3%)
Frame = +3
Query: 3 DAELAMRVLGQMVG-SVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRVD 179
+AEL + M SV+P+ T NT+L +P LD +E+H F +RN +
Sbjct: 242 NAELVLECFALMSSASVKPNLNTLNTILPLLPTFASLDHCREIHCFVIRN-------GIP 294
Query: 180 EERLWSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREM 359
+ + SV+ YA H MD A R+FE ++LK++ + N+MI+GF++ + D+AF
Sbjct: 295 DHGIVSVLVILYA-HHCCMDCALRVFEDIQLKSTAVWNTMIAGFVDINRLDQAF------ 347
Query: 360 AAECIREAKILS-----KVSLTLLLPEC----VQKAKTGLEIHAYAVRRGLESDTSVGNA 512
E +RE K LS + +LTLLLPE Q +K G IHAY R GLE DTSV NA
Sbjct: 348 --EMVREMKRLSSERPDRSTLTLLLPELHRLGTQASKLGDCIHAYTYRNGLELDTSVFNA 405
Query: 513 LMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPD 692
L+AMY R E KVF RT +D+VSWNT++++Y S F++AF LF +M +PD
Sbjct: 406 LVAMYGRSRRIEISRKVFERTQGKDIVSWNTMLSNYVNSGYFNQAFHLFSRMHTEDARPD 465
Query: 693 EYSFSSVLNGCGNSSYLRQGMALHGHMIKSGF 788
E++ SVL CG+ + ++ G ++H + K GF
Sbjct: 466 EFTIPSVLQSCGHFASVQGGSSVHAYAFKGGF 497
Score = 96.7 bits (239), Expect = 7e-19
Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 7/246 (2%)
Frame = +3
Query: 39 VGSVRPDSATFNTLLSAIPDVLWLDWLKE-----LHGFAVRNVGVAGVDRVDEERLWSVI 203
+ S RPD +T LL P++ L +H + RN G++ + +++ +
Sbjct: 356 LSSERPDRSTLTLLL---PELHRLGTQASKLGDCIHAYTYRN----GLEL--DTSVFNAL 406
Query: 204 AAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMAAECIREA 383
A Y GR ++ + ++FE+ + K+ N+M+S ++NS ++AF F M E R
Sbjct: 407 VAMY-GRSRRIEISRKVFERTQGKDIVSWNTMLSNYVNSGYFNQAFHLFSRMHTEDARP- 464
Query: 384 KILSKVSLTLLLPECVQKAKT--GLEIHAYAVRRGLESDTSVGNALMAMYWRKGDKESVE 557
+ ++ +L C A G +HAYA + G D V N+L+ MY + G E E
Sbjct: 465 ---DEFTIPSVLQSCGHFASVQGGSSVHAYAFKGGFIDDLCVENSLIDMYGKCGFVEFAE 521
Query: 558 KVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSS 737
KVF +RD VSWN +++ YAA+ + LF+ M G +P+ +F ++L+ C
Sbjct: 522 KVFREMRQRDFVSWNAMISCYAANKHPNETLSLFESMQNQGWRPNGVTFVAILSACSRGG 581
Query: 738 YLRQGM 755
++ Q +
Sbjct: 582 FVDQSL 587
>pdb|5IWW|D Chain D, Crystal structure of RNA editing factor of designer
PLS-type PPR/9R protein in complex with MORF9/RIP9
Length = 347
Score = 135 bits (341), Expect = 4e-34
Identities = 82/267 (30%), Positives = 150/267 (56%), Gaps = 3/267 (1%)
Frame = +3
Query: 15 AMRVLGQMVGS-VRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRVDEERL 191
A+++ +MV ++PD TF+++L A + L+ K++HG+ +++ G G +
Sbjct: 36 ALKLFEEMVEKGIKPDEFTFSSVLKACARLGALELGKQIHGYVIKS-GFEG-----NVVV 89
Query: 192 WSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMAAEC 371
++ + Y+ + GL++ A ++F+++ K+ N++I G + + D+A F EM +
Sbjct: 90 YNALIDMYS-KCGLLEEARKVFDEMPEKDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 148
Query: 372 IREAKILSKVSLTLLLPECVQKA--KTGLEIHAYAVRRGLESDTSVGNALMAMYWRKGDK 545
I+ + + + +L C + + G +IH Y ++ G ES+ V NAL+ MY + G
Sbjct: 149 IKP----DEFTFSSVLKACARLGALELGKQIHGYVIKSGFESNVVVYNALIDMYSKCGLL 204
Query: 546 ESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGC 725
E KVF E+DVV++NT++ + + D A +LF++M+ G+KPDE++FSSVL C
Sbjct: 205 EEARKVFDEMPEKDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDEFTFSSVLKAC 264
Query: 726 GNSSYLRQGMALHGHMIKSGFSQSYPV 806
L G +HG++IKSGF + V
Sbjct: 265 ARLGALELGKQIHGYVIKSGFESNVVV 291
Score = 82.0 bits (201), Expect = 3e-14
Identities = 55/212 (25%), Positives = 113/212 (53%), Gaps = 3/212 (1%)
Frame = +3
Query: 15 AMRVLGQMVGS-VRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRVDEERL 191
A+++ +MV ++PD TF+++L A + L+ K++HG+ +++ + V +
Sbjct: 137 ALKLFEEMVEKGIKPDEFTFSSVLKACARLGALELGKQIHGYVIKSGFESNVV------V 190
Query: 192 WSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMAAEC 371
++ + Y+ + GL++ A ++F+++ K+ N++I G + + D+A F EM +
Sbjct: 191 YNALIDMYS-KCGLLEEARKVFDEMPEKDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 249
Query: 372 IREAKILSKVSLTLLLPECVQKA--KTGLEIHAYAVRRGLESDTSVGNALMAMYWRKGDK 545
I+ + + + +L C + + G +IH Y ++ G ES+ V NAL+ MY + G
Sbjct: 250 IKP----DEFTFSSVLKACARLGALELGKQIHGYVIKSGFESNVVVYNALIDMYSKCGLL 305
Query: 546 ESVEKVFGRTIERDVVSWNTIVASYAASHEFD 641
E KVF E+D +++ +V SY + F+
Sbjct: 306 EEARKVFDEMPEKDELTYRRVVESYCRAKRFE 337
Score = 67.4 bits (163), Expect = 3e-09
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +3
Query: 588 VVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGMALHG 767
VV++NT++ + + D A +LF++M+ G+KPDE++FSSVL C L G +HG
Sbjct: 17 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDEFTFSSVLKACARLGALELGKQIHG 76
Query: 768 HMIKSGF 788
++IKSGF
Sbjct: 77 YVIKSGF 83
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 130 bits (328), Expect = 1e-30
Identities = 81/267 (30%), Positives = 148/267 (55%), Gaps = 3/267 (1%)
Frame = +3
Query: 15 AMRVLGQM-VGSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRVDEERL 191
A+ + +M V ++P+S+T +++ +L L+ K++H +A+R+ G++ + +
Sbjct: 205 ALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS----GIE--SDVLV 258
Query: 192 WSVIAAGYAGRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMAAEC 371
+ + YA + G ++ A +LFE++ +++ N++I G+ + Q +A F M
Sbjct: 259 VNGLVNMYA-KCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG 317
Query: 372 IREAKILSKVSLTLLLPECVQ--KAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRKGDK 545
I+ + +++ +LP C + G +IH YA+R G ES+ VGNAL+ MY + G+
Sbjct: 318 IKP----NSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNV 373
Query: 546 ESVEKVFGRTIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGC 725
S K+F R +++VV+WN I++ Y+ A LF +M A G+KPD ++ SVL C
Sbjct: 374 NSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPAC 433
Query: 726 GNSSYLRQGMALHGHMIKSGFSQSYPV 806
+ L QG +HG+ I+SGF + V
Sbjct: 434 AHFLALEQGKQIHGYTIRSGFESNVVV 460
Score = 113 bits (283), Expect = 1e-24
Identities = 72/241 (29%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Frame = +3
Query: 39 VGSVRPDSATFNTLLSAIPDVLWLDWLKELHGFAVRNVGVAGVDRVDEERLWSVIAAGYA 218
V ++P+S T ++L A + L+ +++HG+A+R+ G D V + + YA
Sbjct: 315 VRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRS-GFESNDVVG-----NALVNMYA 368
Query: 219 GRHGLMDWASRLFEKVKLKNSQLGNSMISGFLNSRQTDKAFGAFREMAAECIREAKILSK 398
+ G ++ A +LFE++ KN N++ISG+ +A F EM A+ I+
Sbjct: 369 -KCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKP----DS 423
Query: 399 VSLTLLLPECVQ--KAKTGLEIHAYAVRRGLESDTSVGNALMAMYWRKGDKESVEKVFGR 572
++ +LP C + G +IH Y +R G ES+ VG L+ +Y + G+ + +K+F R
Sbjct: 424 FAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFER 483
Query: 573 TIERDVVSWNTIVASYAASHEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQG 752
E+DVVSW T++ +Y + A LF +M G K D +F+++L C ++ + QG
Sbjct: 484 MPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQG 543
Query: 753 M 755
+
Sbjct: 544 L 544
Score = 90.5 bits (223), Expect = 9e-17
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Frame = +3
Query: 276 NSQLGNSMISGFLNSRQTDKAFGAFREMAAECIREAKILSKVSLTLLLPECVQKA--KTG 449
N+ + I G++ + +KA + +M I K++ ++ C ++ + G
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLV----FLSVIKACGSQSDLQAG 139
Query: 450 LEIHAYAVRRGLESDTSVGNALMAMYWRKGDKESVEKVFGRTIERDVVSWNTIVASYAAS 629
++H + RG ESD VG AL +MY + G E+ +VF R +RDVVSWN I+A Y+ +
Sbjct: 140 RKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN 199
Query: 630 HEFDRAFELFQQMLAVGLKPDEYSFSSVLNGCGNSSYLRQGMALHGHMIKSG 785
+ A LF +M G+KP+ + SV+ C + L QG +H + I+SG
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSG 251