BLASTX nr result
ID: Ophiopogon24_contig00025525
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00025525
(659 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PON51311.1| Ribonuclease H-like domain containing protein, pa... 145 2e-65
gb|OMO55593.1| reverse transcriptase [Corchorus capsularis] 151 1e-63
gb|OMO58913.1| reverse transcriptase [Corchorus capsularis] 151 4e-63
ref|XP_024035579.1| uncharacterized protein LOC112096381 [Citrus... 151 8e-62
gb|OMO80899.1| reverse transcriptase [Corchorus capsularis] 146 8e-62
gb|OMO91869.1| reverse transcriptase [Corchorus capsularis] 149 1e-61
ref|XP_020259043.1| uncharacterized protein LOC109835477 [Aspara... 167 4e-61
gb|ABA96087.1| retrotransposon protein, putative, Ty3-gypsy subc... 147 1e-59
gb|OTG36861.1| putative reverse transcriptase domain-containing ... 150 2e-59
gb|AAQ56486.1| putative polyprotein [Oryza sativa Japonica Group] 148 2e-59
emb|CAE02386.2| OSJNBb0080H08.12 [Oryza sativa Japonica Group] 147 2e-59
gb|AAP44586.1| putative polyprotein [Oryza sativa Japonica Group... 149 2e-59
gb|AAX95899.1| retrotransposon protein, putative, Ty3-gypsy sub-... 147 3e-59
ref|XP_022931734.1| uncharacterized protein LOC111437896 [Cucurb... 154 4e-59
gb|AAM08802.1|AC090486_12 putative retroelement [Oryza sativa Ja... 147 5e-59
gb|ABA98029.2| retrotransposon protein, putative, Ty3-gypsy subc... 147 6e-59
ref|XP_022933231.1| LOW QUALITY PROTEIN: uncharacterized protein... 155 8e-59
gb|ABA98185.1| retrotransposon protein, putative, Ty3-gypsy subc... 147 8e-59
emb|CAH65747.1| OSIGBa0102B11.1 [Oryza sativa] 147 8e-59
dbj|BAH80069.1| putative retrotransposon protein [Oryza sativa I... 147 8e-59
>gb|PON51311.1| Ribonuclease H-like domain containing protein, partial [Trema
orientalis]
Length = 304
Score = 145 bits (365), Expect(2) = 2e-65
Identities = 65/87 (74%), Positives = 76/87 (87%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
LK++E+ YPTH+LELAAVIFALKIWRHY G+R IYTDHKSLKY FTQKELNMRQRRWL
Sbjct: 64 LKEYEKKYPTHELELAAVIFALKIWRHYHYGERCQIYTDHKSLKYFFTQKELNMRQRRWL 123
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRR 261
EL+ DY+ ++ YHPGK NV+ DALSR+
Sbjct: 124 ELVKDYNCEINYHPGKANVIADALSRK 150
Score = 133 bits (334), Expect(2) = 2e-65
Identities = 58/130 (44%), Positives = 94/130 (72%)
Frame = +2
Query: 269 SACFLQITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQF 448
+A L+ +K LL ++R L+L +V + + E+L+A+ ++PT++ERIK++QN+DP L
Sbjct: 153 AAISLKYVDRKHLLMDLRRLELEIVPKGLI-EKLVALTLQPTILERIKKSQNTDPYLTSL 211
Query: 449 REQVEANLRFDFQIHPSGGLYYGDKICVPKGDVRQEVLAEAHSSAYSVHPGSTKMYRDLR 628
+ ++E+ FQI G + Y +++CVP+G +R+E+L EAH+ YSVHPG+TKMYRDL+
Sbjct: 212 KTKIESGKEVPFQISSDGVIKYRNRLCVPEGTIRKEILTEAHTIPYSVHPGTTKMYRDLK 271
Query: 629 QHFWWNGMKR 658
H+WW GMK+
Sbjct: 272 MHYWWPGMKK 281
>gb|OMO55593.1| reverse transcriptase [Corchorus capsularis]
Length = 1385
Score = 151 bits (381), Expect(2) = 1e-63
Identities = 68/87 (78%), Positives = 78/87 (89%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
LK +ERNYPTHDLELAAV+FALKIWRHYL G++ I+TDHKSLKYIFTQKE+NMRQRRWL
Sbjct: 805 LKPYERNYPTHDLELAAVVFALKIWRHYLYGEKCEIFTDHKSLKYIFTQKEINMRQRRWL 864
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRR 261
EL+ DYD+ + YHPGK NVV DALSR+
Sbjct: 865 ELLKDYDLTISYHPGKANVVADALSRK 891
Score = 120 bits (301), Expect(2) = 1e-63
Identities = 55/125 (44%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
Frame = +2
Query: 287 ITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEA 466
+T Q+ +L ++R +++ V + T L +++++PTLIERIKEAQ D L++ R +E
Sbjct: 900 LTSQRSILDDLRRMEIGVRKHGTEG-MLASLRIQPTLIERIKEAQLVDSALQKVRANIET 958
Query: 467 NLRFDFQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWW 643
+ DF+IH G L + D++CVP ++++ +L EAH S Y+VHPG TKMYRDL++ +WW
Sbjct: 959 GVPSDFRIHDDGSLRFDDRLCVPNDVEIKKVILDEAHYSGYTVHPGGTKMYRDLKETYWW 1018
Query: 644 NGMKR 658
N MKR
Sbjct: 1019 NNMKR 1023
>gb|OMO58913.1| reverse transcriptase [Corchorus capsularis]
Length = 1477
Score = 151 bits (381), Expect(2) = 4e-63
Identities = 68/87 (78%), Positives = 78/87 (89%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
LK +ERNYPTHDLELAAV+FALKIWRHYL G++ I+TDHKSLKYIFTQKE+NMRQRRWL
Sbjct: 925 LKPYERNYPTHDLELAAVVFALKIWRHYLYGEKCEIFTDHKSLKYIFTQKEINMRQRRWL 984
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRR 261
EL+ DYD+ + YHPGK NVV DALSR+
Sbjct: 985 ELLKDYDLTISYHPGKANVVADALSRK 1011
Score = 119 bits (297), Expect(2) = 4e-63
Identities = 55/125 (44%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
Frame = +2
Query: 287 ITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEA 466
+T Q+ +L ++R +++ V R+ + L +++++P LIERIKEAQ D L++ R +E
Sbjct: 1020 LTSQRSILDDLRRMEIGV-RKHGIEGMLASLRIQPMLIERIKEAQLVDSALQKVRANIET 1078
Query: 467 NLRFDFQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWW 643
DF+ H G L +GD++CVP ++++ VL EAH S Y+VHPG TKMYRDL++ +WW
Sbjct: 1079 GAPSDFRTHDDGSLRFGDRLCVPNDVEIKKVVLDEAHYSGYTVHPGGTKMYRDLKETYWW 1138
Query: 644 NGMKR 658
N MKR
Sbjct: 1139 NNMKR 1143
>ref|XP_024035579.1| uncharacterized protein LOC112096381 [Citrus clementina]
Length = 1747
Score = 151 bits (381), Expect(2) = 8e-62
Identities = 67/92 (72%), Positives = 78/92 (84%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
LK HE+NYPTHDLELAA++FALKIWRHYL GD I+T+HKSLKY+FTQKELN+RQRRWL
Sbjct: 449 LKNHEQNYPTHDLELAAIVFALKIWRHYLYGDTCEIFTNHKSLKYLFTQKELNLRQRRWL 508
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGECM 276
EL+ D+D + YHPGK NVV DALSR+ CM
Sbjct: 509 ELVKDFDCSINYHPGKANVVADALSRKSSGCM 540
Score = 114 bits (286), Expect(2) = 8e-62
Identities = 58/134 (43%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Frame = +2
Query: 263 RESACFLQ-ITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKL 439
+ S C IT Q ++K++R + VV A+ L + V+PTLI+R+K AQ +D +L
Sbjct: 535 KSSGCMAHLITMQSHVVKDLRRCGIEVVTHGQ-ADVLAHLTVQPTLIDRVKVAQKNDIEL 593
Query: 440 RQFREQVEANLRFDFQIHPSGGLYYGDKICVPKGD-VRQEVLAEAHSSAYSVHPGSTKMY 616
+ RE V + F++ GL+ G ++CVP + ++ E+L EAH S+YS+HPGSTKMY
Sbjct: 594 NKIREDVSKGHKPGFRLDNGDGLWLGQRLCVPADEELKAEILREAHESSYSMHPGSTKMY 653
Query: 617 RDLRQHFWWNGMKR 658
RDL+Q FWW MKR
Sbjct: 654 RDLKQSFWWRNMKR 667
>gb|OMO80899.1| reverse transcriptase [Corchorus capsularis]
Length = 1087
Score = 146 bits (368), Expect(2) = 8e-62
Identities = 67/87 (77%), Positives = 77/87 (88%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
LK +ERNYPTHDLELAAV+FALKI RHYL G++ I+TDHKSLKYIFTQKE+NMRQRRWL
Sbjct: 557 LKPYERNYPTHDLELAAVVFALKILRHYLYGEKCEIFTDHKSLKYIFTQKEINMRQRRWL 616
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRR 261
EL+ DYD+ + YHPGK NVV DALSR+
Sbjct: 617 ELLKDYDLTISYHPGKANVVADALSRK 643
Score = 119 bits (299), Expect(2) = 8e-62
Identities = 55/125 (44%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
Frame = +2
Query: 287 ITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEA 466
+T Q+ +L ++ +++ V R+ + L +++++PTLIERIKEAQ D L++ R +E
Sbjct: 652 LTSQRSILDDLIRMEIGV-RKHGIEGMLASLRIQPTLIERIKEAQLVDSALQKVRANIET 710
Query: 467 NLRFDFQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWW 643
DF+IH G L +GD++CVP ++++ +L EAH S Y+VHPG TKMYRDL++ +WW
Sbjct: 711 GAPSDFRIHDDGSLRFGDRLCVPNDVEIKKVILDEAHYSGYTVHPGGTKMYRDLKETYWW 770
Query: 644 NGMKR 658
N MKR
Sbjct: 771 NNMKR 775
>gb|OMO91869.1| reverse transcriptase [Corchorus capsularis]
Length = 1401
Score = 149 bits (377), Expect(2) = 1e-61
Identities = 68/87 (78%), Positives = 77/87 (88%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
LK +E+NYPTHDLELAAV+FALKIWRHYL G+ IYTDHKSLKY+FTQKELNMRQRRWL
Sbjct: 860 LKPYEQNYPTHDLELAAVVFALKIWRHYLYGESCEIYTDHKSLKYLFTQKELNMRQRRWL 919
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRR 261
EL+ DYD+ + YHPGK NVV DALSR+
Sbjct: 920 ELIKDYDLSINYHPGKANVVVDALSRK 946
Score = 115 bits (289), Expect(2) = 1e-61
Identities = 58/125 (46%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
Frame = +2
Query: 287 ITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEA 466
IT Q+ LL+E+ + VV + L ++ V+P+LIERIK AQ D +L + +E VE
Sbjct: 955 ITTQRRLLEELDGEQIEVVMQGE-GVLLASLVVQPSLIERIKVAQKDDLELCRIKEDVEN 1013
Query: 467 NLRFDFQIHPSGGLYYGDKICVPKGDV-RQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWW 643
L+ DF IH G L +G ++CVP V ++E+L EAH S +++HPG TKMY+DL+++FWW
Sbjct: 1014 GLKTDFNIHIDGTLQFGSRLCVPNDFVLKREILEEAHGSRFTIHPGGTKMYKDLKENFWW 1073
Query: 644 NGMKR 658
N MKR
Sbjct: 1074 NNMKR 1078
>ref|XP_020259043.1| uncharacterized protein LOC109835477 [Asparagus officinalis]
Length = 1189
Score = 167 bits (422), Expect(2) = 4e-61
Identities = 75/86 (87%), Positives = 85/86 (98%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
LK+HE+NYPTHDLELAAVIFALK+WRHYLLG++V ++TDHKSLKY+FTQKELNMRQRRWL
Sbjct: 809 LKKHEQNYPTHDLELAAVIFALKLWRHYLLGEQVKVFTDHKSLKYLFTQKELNMRQRRWL 868
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSR 258
ELMADY++DLQYHPGKVNVVPDALSR
Sbjct: 869 ELMADYNIDLQYHPGKVNVVPDALSR 894
Score = 96.7 bits (239), Expect(2) = 4e-61
Identities = 48/106 (45%), Positives = 71/106 (66%)
Frame = +2
Query: 281 LQITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQV 460
+ +T Q L +E+R++ + V+ A LM +Q++ TLI+R+K AQ DP L++ RE
Sbjct: 899 MTLTAQWRLQQEVRDMSIEVLLPGVTAS-LMNLQIQSTLIKRLKAAQAGDPFLQKCRELA 957
Query: 461 EANLRFDFQIHPSGGLYYGDKICVPKGDVRQEVLAEAHSSAYSVHP 598
A LR +F IH G L +G +ICVP GD+R+++L EAHSS YS+HP
Sbjct: 958 VAGLRPEFVIHEDGSLRFGSRICVPGGDIREDILREAHSSPYSIHP 1003
>gb|ABA96087.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1111
Score = 147 bits (370), Expect(2) = 1e-59
Identities = 67/91 (73%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
L+ HE+NYPTHD+ELAAV+ ALKIWRHYL G R +YTDHKSLKYIFTQ +LNMRQRRWL
Sbjct: 499 LRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWL 558
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGEC 273
EL+ DYD+ + YHPGK NVV DALSR+ G C
Sbjct: 559 ELIKDYDMGIHYHPGKANVVADALSRK-GYC 588
Score = 111 bits (278), Expect(2) = 1e-59
Identities = 53/120 (44%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 302 ELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEANLRFD 481
EL KE L+L +V R VA A++ KPTLI++++EAQN+DP +++ ++ +
Sbjct: 599 ELCKEFERLNLGIVGRGFVA----ALEAKPTLIDQVREAQNNDPDIQEIKKNMRRGKAIG 654
Query: 482 FQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWWNGMKR 658
F G ++ G++ICVP D++ VL EAH + YS+HPGSTKMY+DL++ FWW MKR
Sbjct: 655 FLEDEQGTVWLGERICVPDNKDLKDAVLKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 714
>gb|OTG36861.1| putative reverse transcriptase domain-containing protein [Helianthus
annuus]
Length = 2099
Score = 150 bits (378), Expect(2) = 2e-59
Identities = 69/87 (79%), Positives = 77/87 (88%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
LK +E NYPTHDLELAAV+FALKIWRHYL G+ I+TDHKSLKYIFTQKELNMRQRRWL
Sbjct: 1482 LKPYEVNYPTHDLELAAVVFALKIWRHYLYGETCNIFTDHKSLKYIFTQKELNMRQRRWL 1541
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRR 261
EL+ DYD ++QYHPGK NVV DALSR+
Sbjct: 1542 ELLKDYDANIQYHPGKANVVADALSRK 1568
Score = 107 bits (268), Expect(2) = 2e-59
Identities = 50/124 (40%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
Frame = +2
Query: 287 ITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEA 466
+T + +L ++R +++ + + L ++++P LI +IKEAQ D +L + +E
Sbjct: 1576 LTLEPHILSDLRRMEIGI-QVGESGGYLARLKIEPNLITQIKEAQKDDGELWAVLQNLEV 1634
Query: 467 NLRFDFQIHPSGGLYYGDKICVPK-GDVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWW 643
+ +F++ G ++ G ++CVP +R+ +L EAHSS YS+HPGSTKMYRDLRQHFWW
Sbjct: 1635 GKQSEFRVDEHGTIWCGKRLCVPDDSSLRESLLTEAHSSPYSIHPGSTKMYRDLRQHFWW 1694
Query: 644 NGMK 655
+GMK
Sbjct: 1695 SGMK 1698
>gb|AAQ56486.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2032
Score = 148 bits (373), Expect(2) = 2e-59
Identities = 69/91 (75%), Positives = 78/91 (85%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
L+ HE+NYPTHDLELAAVI ALKIWRHYL G + +YTDHKSLKYIFTQ +LNMRQRRWL
Sbjct: 1494 LRPHEKNYPTHDLELAAVIHALKIWRHYLFGTCIEVYTDHKSLKYIFTQPDLNMRQRRWL 1553
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGEC 273
EL+ DYD+ +QYHPGK NVV DALSR+ G C
Sbjct: 1554 ELIKDYDMGIQYHPGKANVVADALSRK-GYC 1583
Score = 109 bits (273), Expect(2) = 2e-59
Identities = 52/120 (43%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 302 ELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEANLRFD 481
EL KE L+L +VRR VA A++ KPTLI++++EAQ +DP +++ ++ +
Sbjct: 1594 ELCKEFERLNLGIVRRGFVA----ALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIG 1649
Query: 482 FQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWWNGMKR 658
F G ++ G++ICVP D++ +L EAH + YS+HPGSTKMY+DL + FWW MKR
Sbjct: 1650 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLEERFWWASMKR 1709
>emb|CAE02386.2| OSJNBb0080H08.12 [Oryza sativa Japonica Group]
Length = 1666
Score = 147 bits (370), Expect(2) = 2e-59
Identities = 67/91 (73%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
L+ HE+NYPTHD+ELAAV+ ALKIWRHYL G R +YTDHKSLKYIFTQ +LNMRQRRWL
Sbjct: 1115 LRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWL 1174
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGEC 273
EL+ DYD+ + YHPGK NVV DALSR+ G C
Sbjct: 1175 ELIKDYDMGIHYHPGKANVVADALSRK-GYC 1204
Score = 110 bits (276), Expect(2) = 2e-59
Identities = 52/120 (43%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 302 ELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEANLRFD 481
EL KE L+L +V R VA A++ KPTLI++++EAQN+DP +++ ++ +
Sbjct: 1215 ELCKEFERLNLGIVGRGFVA----ALEAKPTLIDQVREAQNNDPDIQEIKKNMRRGKAIG 1270
Query: 482 FQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWWNGMKR 658
F G ++ G++ICVP D++ +L EAH + YS+HPGSTKMY+DL++ FWW MKR
Sbjct: 1271 FLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1330
>gb|AAP44586.1| putative polyprotein [Oryza sativa Japonica Group]
gb|ABF97037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1436
Score = 149 bits (376), Expect(2) = 2e-59
Identities = 69/91 (75%), Positives = 78/91 (85%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
L+ HE+NYPTHDLELAAV+ ALKIWRHYL G R +YTDHKSLKYIFTQ +LNMRQRRWL
Sbjct: 824 LRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWL 883
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGEC 273
EL+ DYD+ + YHPGKVNVV DALSR+ G C
Sbjct: 884 ELIKDYDMGIHYHPGKVNVVADALSRK-GYC 913
Score = 108 bits (270), Expect(2) = 2e-59
Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 302 ELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEANLRFD 481
EL KE L+L +V R VA A++ KPTLI++++EAQ +DP +++ ++ +
Sbjct: 924 ELCKEFERLNLGIVSRGFVA----ALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIG 979
Query: 482 FQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWWNGMKR 658
F G ++ G++ICVP D++ +L EAH++ YS+HPGSTKMY+DL++ FWW MKR
Sbjct: 980 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHNTLYSIHPGSTKMYQDLKERFWWASMKR 1039
>gb|AAX95899.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
gb|ABA92460.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1686
Score = 147 bits (370), Expect(2) = 3e-59
Identities = 68/91 (74%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
L+ HE+NYPTHDLELAAV+ ALKIWRHYL G R +YTDHKSLKYIFTQ +LNMRQRRWL
Sbjct: 1112 LRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWL 1171
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGEC 273
EL+ DYD+ + YHPGK NVV DALSR+ G C
Sbjct: 1172 ELIKDYDMVIHYHPGKANVVADALSRK-GYC 1201
Score = 110 bits (275), Expect(2) = 3e-59
Identities = 52/120 (43%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 302 ELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEANLRFD 481
EL KE L+L +VRR VA A++ KPTLI++++EAQ +DP +++ ++ +
Sbjct: 1212 ELCKEFERLNLGIVRRGFVA----ALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIG 1267
Query: 482 FQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWWNGMKR 658
F G ++ G++ICVP D++ +L EAH + YS+HPGSTKMY+DL++ FWW MKR
Sbjct: 1268 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1327
>ref|XP_022931734.1| uncharacterized protein LOC111437896 [Cucurbita moschata]
Length = 1893
Score = 154 bits (390), Expect(2) = 4e-59
Identities = 68/87 (78%), Positives = 80/87 (91%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
LK++ERNYPTHDLELAAV++ALK WRHYL G+RV +YTDHKSLKY+FTQKELNMRQRRWL
Sbjct: 933 LKEYERNYPTHDLELAAVVYALKTWRHYLYGERVQVYTDHKSLKYLFTQKELNMRQRRWL 992
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRR 261
EL+ DYD+++ YHPGK NVV DALSR+
Sbjct: 993 ELVKDYDIEILYHPGKANVVADALSRK 1019
Score = 102 bits (254), Expect(2) = 4e-59
Identities = 52/125 (41%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Frame = +2
Query: 287 ITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEA 466
IT+QK L E++ + V+ R A QL + V+PTL RI EAQ +D L + Q E
Sbjct: 1027 ITRQKYLQDEIQRAGIEVLDRGITA-QLAQLSVQPTLKRRIIEAQRTDTHLSRIWGQQET 1085
Query: 467 NLRFDFQIHPSGGLYYGDKICVPKGD-VRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWW 643
+ + GGL + D++CVP+ + + QE++ EAH+++Y+ HPGSTKMY+DL+ +WW
Sbjct: 1086 ERPNGYSVSSEGGLMWQDRLCVPRDEKILQEIMTEAHNTSYTFHPGSTKMYQDLKCSYWW 1145
Query: 644 NGMKR 658
GMK+
Sbjct: 1146 PGMKK 1150
>gb|AAM08802.1|AC090486_12 putative retroelement [Oryza sativa Japonica Group]
gb|AAP52977.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1594
Score = 147 bits (372), Expect(2) = 5e-59
Identities = 68/91 (74%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
L+ HE+NYPTHDLELAAV+ ALKIWRHYL G R +YTDHKSLKYIFTQ +LNMRQRRWL
Sbjct: 1123 LRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWL 1182
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGEC 273
EL+ DYD+ + YHPGK NVV DALSR+ G C
Sbjct: 1183 ELIKDYDMGIHYHPGKANVVADALSRK-GYC 1212
Score = 108 bits (271), Expect(2) = 5e-59
Identities = 51/120 (42%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 302 ELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEANLRFD 481
EL KE L+L +V R VA A++ KPTLI++++EAQ +DP +++ ++ +
Sbjct: 1223 ELCKEFERLNLGIVSRGFVA----ALEAKPTLIDQVREAQINDPDIQEIKKNIRRGKAIG 1278
Query: 482 FQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWWNGMKR 658
F G ++ G++ICVP D++ +L EAH + YS+HPGSTKMY+DL++ FWW MKR
Sbjct: 1279 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1338
>gb|ABA98029.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1541
Score = 147 bits (372), Expect(2) = 6e-59
Identities = 69/91 (75%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
L+ HE+NYPTHDLELAAV+ ALKIWRHYL G R +YTDHKSLKYIFTQ +LNMRQRRWL
Sbjct: 1036 LRPHEKNYPTHDLELAAVVRALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWL 1095
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGEC 273
EL+ DYD+ + YHPGKVNVV DAL RR G C
Sbjct: 1096 ELIKDYDMGIHYHPGKVNVVADAL-RRKGYC 1125
Score = 108 bits (270), Expect(2) = 6e-59
Identities = 52/120 (43%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 302 ELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEANLRFD 481
EL KE L+L +V R VA A++ KPTLI++I+EAQ +DP +++ ++ +
Sbjct: 1136 ELCKEFERLNLGIVSRGFVA----ALEAKPTLIDQIREAQINDPDIQEIKKNMRRGRAIG 1191
Query: 482 FQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWWNGMKR 658
F G ++ G++ICVP D++ +L EAH + YS+HPGSTKMY+DL++ FWW MKR
Sbjct: 1192 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1251
>ref|XP_022933231.1| LOW QUALITY PROTEIN: uncharacterized protein LOC111440131 [Cucurbita
moschata]
Length = 1803
Score = 155 bits (391), Expect(2) = 8e-59
Identities = 69/87 (79%), Positives = 79/87 (90%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
LK +E+NYPTHDLELAAV+FALKIWRHY G++ IYTDHKSLKY+FTQKELNMRQRRWL
Sbjct: 853 LKDYEKNYPTHDLELAAVVFALKIWRHYPYGEKTQIYTDHKSLKYLFTQKELNMRQRRWL 912
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRR 261
EL+ DYD+D+QYHPGK NVV DALSR+
Sbjct: 913 ELVKDYDIDIQYHPGKANVVADALSRK 939
Score = 100 bits (250), Expect(2) = 8e-59
Identities = 50/125 (40%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
Frame = +2
Query: 287 ITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEA 466
IT++ + + D++VV + VA QL + V+PTL +RI ++Q DP L + +Q+E
Sbjct: 947 ITREPRGRTDFEQADIVVVTKE-VAAQLARMTVRPTLRQRIIDSQREDPSLSKILDQLEV 1005
Query: 467 NLRFDFQIHPSGGLYYGDKICVPK-GDVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWW 643
F GL ++CVP ++ E+L EAH+SA+S+HPG TKMY+DL++HFWW
Sbjct: 1006 GPVDGFTKSTDDGLLCQGRLCVPPLSGIKNEILTEAHNSAFSIHPGGTKMYQDLKKHFWW 1065
Query: 644 NGMKR 658
MK+
Sbjct: 1066 RSMKK 1070
Score = 101 bits (251), Expect(2) = 1e-23
Identities = 50/125 (40%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Frame = +2
Query: 287 ITQQKELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEA 466
IT++ + +E ++ V + +A QL + V+PTL +RI +Q DP L++ Q++
Sbjct: 1320 ITREVRVQREFERANIAVATKGVIA-QLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK 1378
Query: 467 NLRFDFQIHPSGGLYYGDKICVPK-GDVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWW 643
+ F GL Y ++CVP D+R+E+L EAH+S +++HPG TKMY+DL+QHFWW
Sbjct: 1379 SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWW 1438
Query: 644 NGMKR 658
MKR
Sbjct: 1439 KSMKR 1443
Score = 36.6 bits (83), Expect(2) = 1e-23
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 205 DLQYHPGKVNVVPDALSRR 261
D+QYHPGK NVV DALSR+
Sbjct: 1294 DIQYHPGKANVVVDALSRK 1312
>gb|ABA98185.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1699
Score = 147 bits (372), Expect(2) = 8e-59
Identities = 68/91 (74%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
L+ HE+NYPTHDLELAAV+ ALKIWRHYL G R +YTDHKSLKYIFTQ +LNMRQRRWL
Sbjct: 1087 LRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWL 1146
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGEC 273
EL+ DYD+ + YHPGK NVV DALSR+ G C
Sbjct: 1147 ELIKDYDMGIHYHPGKANVVADALSRK-GYC 1176
Score = 108 bits (269), Expect(2) = 8e-59
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 302 ELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEANLRFD 481
EL KE L+L +V R VA A++ KPTLI++++EAQ +DP +++ ++ +
Sbjct: 1187 ELCKEFERLNLGIVSRGFVA----ALEAKPTLIDQVREAQINDPNIQEIKKNMRRGKAIG 1242
Query: 482 FQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWWNGMKR 658
F G ++ G++ICVP D++ +L EAH + YS+HPG+TKMY+DL++ FWW MKR
Sbjct: 1243 FMEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGTTKMYQDLKERFWWASMKR 1302
>emb|CAH65747.1| OSIGBa0102B11.1 [Oryza sativa]
Length = 1601
Score = 147 bits (372), Expect(2) = 8e-59
Identities = 68/91 (74%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
L+ HE+NYPTHDLELAAV+ ALKIWRHYL G R +YTDHKSLKYIFTQ +LNMRQRRWL
Sbjct: 989 LRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWL 1048
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGEC 273
EL+ DYD+ + YHPGK NVV DALSR+ G C
Sbjct: 1049 ELIKDYDMGIHYHPGKANVVADALSRK-GYC 1078
Score = 108 bits (269), Expect(2) = 8e-59
Identities = 51/120 (42%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 302 ELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEANLRFD 481
EL KE L+L +V R VA A++ KPTLI++++EAQ +DP +++ ++ +
Sbjct: 1089 ELCKEFERLNLGIVSRGFVA----ALEAKPTLIDQVREAQVNDPDIQEIKKNMRRGKAIG 1144
Query: 482 FQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWWNGMKR 658
F G ++ G++ICVP D++ +L EAH + YS+HPGSTKMY+DL++ FWW MKR
Sbjct: 1145 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1204
>dbj|BAH80069.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1475
Score = 147 bits (372), Expect(2) = 8e-59
Identities = 68/91 (74%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSLKYIFTQKELNMRQRRWL 180
L+ HE+NYPTHDLELAAV+ ALKIWRHYL G R +YTDHKSLKYIFTQ +LNMRQRRWL
Sbjct: 863 LRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWL 922
Query: 181 ELMADYDVDLQYHPGKVNVVPDALSRRPGEC 273
EL+ DYD+ + YHPGK NVV DALSR+ G C
Sbjct: 923 ELIKDYDMGIHYHPGKANVVADALSRK-GYC 952
Score = 108 bits (269), Expect(2) = 8e-59
Identities = 51/120 (42%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 302 ELLKEMRELDLMVVRRATVAEQLMAIQVKPTLIERIKEAQNSDPKLRQFREQVEANLRFD 481
EL KE L+L +V R VA A++ KPTLI++++EAQ +DP +++ ++ +
Sbjct: 963 ELCKEFERLNLGIVSRGFVA----ALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIG 1018
Query: 482 FQIHPSGGLYYGDKICVPKG-DVRQEVLAEAHSSAYSVHPGSTKMYRDLRQHFWWNGMKR 658
F G ++ G++ICVP D++ +L EAH + YS+HPGSTKMY+DL++ FWW MKR
Sbjct: 1019 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1078