BLASTX nr result

ID: Ophiopogon24_contig00025318 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00025318
         (456 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020260062.1| pentatricopeptide repeat-containing protein ...    60   1e-07

>ref|XP_020260062.1| pentatricopeptide repeat-containing protein At3g14730-like
           [Asparagus officinalis]
 ref|XP_020260063.1| pentatricopeptide repeat-containing protein At3g14730-like
           [Asparagus officinalis]
 gb|ONK71012.1| uncharacterized protein A4U43_C04F3810 [Asparagus officinalis]
          Length = 627

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +1

Query: 184 PNEMNKKLSTLISHLHHCSHTQNLPKTQQLHSHLITTGLLLSSPQATTSLISIYSA 351
           P ++   L+ LISHL  CS TQNL + +Q+HSHLIT     S PQ TTSLIS+YS+
Sbjct: 5   PPKLTVNLARLISHLQLCSKTQNLSRAKQIHSHLITNN-FHSCPQTTTSLISLYSS 59


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