BLASTX nr result

ID: Ophiopogon24_contig00025273 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00025273
         (356 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018684770.1| PREDICTED: F-box protein At5g39450-like [Mus...    57   4e-07
ref|XP_010911198.1| PREDICTED: F-box protein At5g39450 [Elaeis g...    57   6e-07

>ref|XP_018684770.1| PREDICTED: F-box protein At5g39450-like [Musa acuminata subsp.
           malaccensis]
          Length = 618

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
 Frame = +1

Query: 7   DLESVPLFAANS--EEEMMLADRRSRLVQMYKVSGGGRLDWRAAEILGSIEQSRGHSCSN 180
           DL + PLF  +S  ++  +LA+RR  L++M K+SGG  +D  AAE+  S+ + R  + SN
Sbjct: 272 DLAAAPLFERSSFCDDANLLANRRLELIEMLKLSGGW-IDRMAAELALSLTEHRNAASSN 330

Query: 181 GDGVGCXXXXXXXXXXXXXXXXXXXVVKQIIGRSSSP-----KNGTPLAASESKHVPLSE 345
                                     +KQ +GRS+SP     +NG P+   ++KH  L E
Sbjct: 331 A----VDHRTRTATDKRRAFSSVAGYLKQFMGRSTSPNVPISRNGNPVGGGKNKHAQLHE 386

Query: 346 FLR 354
           FLR
Sbjct: 387 FLR 389


>ref|XP_010911198.1| PREDICTED: F-box protein At5g39450 [Elaeis guineensis]
          Length = 631

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
 Frame = +1

Query: 7   DLESVPLFAANSEEE--MMLADRRSRLVQMYKVSGGGRLDWRAAE-ILGSIEQSRGHSCS 177
           DL + PLF  +S  +   +LADRR  L+QM+K++ GGR+D + AE  LG  E+SR     
Sbjct: 280 DLAAAPLFPCSSTHDDIAILADRRLSLIQMHKLN-GGRMDRKVAESSLGLSERSR---IR 335

Query: 178 NGDGVGCXXXXXXXXXXXXXXXXXXXVVKQIIGRSSSPKNGTPL--------AASESKHV 333
             D + C                    +KQ++ RSSS  N   L         +SESKHV
Sbjct: 336 RNDEIPCSRSTTTGRRRNLFSVAKDG-LKQVMRRSSSSLNSAGLISRNRGSSGSSESKHV 394

Query: 334 PLSEFLR 354
           P+ EFLR
Sbjct: 395 PVDEFLR 401


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