BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00025188
         (377 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008783216.1| PREDICTED: putative pentatricopeptide repeat...    82   2e-15
ref|XP_020259355.1| putative pentatricopeptide repeat-containing...    79   1e-14
ref|XP_009399848.1| PREDICTED: putative pentatricopeptide repeat...    76   1e-13
ref|XP_010915923.1| PREDICTED: putative pentatricopeptide repeat...    74   6e-13
gb|PKA53161.1| Putative pentatricopeptide repeat-containing prot...    70   2e-11
ref|XP_020086967.1| putative pentatricopeptide repeat-containing...    62   2e-08
gb|PKU83772.1| Putative pentatricopeptide repeat-containing prot...    59   2e-07
ref|XP_020704787.1| putative pentatricopeptide repeat-containing...    59   2e-07
ref|XP_020589314.1| putative pentatricopeptide repeat-containing...    57   1e-06
ref|XP_020589319.1| putative pentatricopeptide repeat-containing...    55   2e-06

>ref|XP_008783216.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200 [Phoenix dactylifera]
          Length = 559

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
 Frame = +2

Query: 8   FTSYAQIEPTNNRCRLKELQFSFQSNLSYGSFSSRNMHCGGISGLSTQSRVKFFDWNSEV 187
           + SY Q E      R + L   FQ+ LS G    +  +    SG   QSR  + +  S++
Sbjct: 40  YASYKQDELGRKSVRSEGLSGRFQNILSNGYVPCKYFYAQSSSGTYAQSRSCYMNSFSQI 99

Query: 188 ETNKL--PGQMTLDNDANTRNAIMIQDILKSRENDFQQETTLNQRKLSVNEELIVQVLRR 361
           E+N L    +   DND+ T+ A MIQ+ILKS E+  + E+ LN+   S+ E+L+VQVLRR
Sbjct: 100 ESNSLLNADRAASDNDSITKYAAMIQEILKSHESTSELESALNRFVPSLGEDLVVQVLRR 159

Query: 362 HRSDW 376
           HRSDW
Sbjct: 160 HRSDW 164


>ref|XP_020259355.1| putative pentatricopeptide repeat-containing protein At3g15200
           [Asparagus officinalis]
 gb|ONK76730.1| uncharacterized protein A4U43_C03F31520 [Asparagus officinalis]
          Length = 505

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 51/123 (41%), Positives = 63/123 (51%)
 Frame = +2

Query: 8   FTSYAQIEPTNNRCRLKELQFSFQSNLSYGSFSSRNMHCGGISGLSTQSRVKFFDWNSEV 187
           F S +QIE  +N  R KE  F         SF  R++H                      
Sbjct: 30  FVSRSQIELISNSFRSKEAHFF--------SFPRRDLH---------------------- 59

Query: 188 ETNKLPGQMTLDNDANTRNAIMIQDILKSRENDFQQETTLNQRKLSVNEELIVQVLRRHR 367
            +N++ G    DND+NT N +MIQDILK  END Q E  L+Q  LSVNE+L+VQVL RHR
Sbjct: 60  -SNEVDGPSISDNDSNTSNVVMIQDILKYHENDCQLEKALDQFTLSVNEDLVVQVLCRHR 118

Query: 368 SDW 376
           S W
Sbjct: 119 SAW 121


>ref|XP_009399848.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200 [Musa acuminata subsp. malaccensis]
          Length = 576

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
 Frame = +2

Query: 11  TSYAQIEPTNNRCRLKELQFSFQSNLSYGSFSS-RNMHCGGISGLSTQSRVKFFDWNSEV 187
           TSY Q +   N C L      F  N+   SF S +N++  G  G S QSR++     SEV
Sbjct: 45  TSYVQ-DALWNHCALLRKSLYFSQNIGIHSFISLQNIYPKGFLGTSMQSRLRLSSSVSEV 103

Query: 188 ETNKLPGQ--MTLDNDANTRNAIMIQDILKSRENDFQQETTLNQRKLSVNEELIVQVLRR 361
             + LP    +  DN  + R+A+MIQ ILKS EN  +  + L++  + + E+L+V VLRR
Sbjct: 104 CVS-LPSTDGLASDNGPSARDAMMIQKILKSHENSTELPSVLDKCNIQLTEDLVVNVLRR 162

Query: 362 HRSDW 376
           HRSDW
Sbjct: 163 HRSDW 167


>ref|XP_010915923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200 [Elaeis guineensis]
          Length = 565

 Score = 74.3 bits (181), Expect = 6e-13
 Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
 Frame = +2

Query: 11  TSYAQIEPTNNRCRLKELQFSFQSNLSYGSFSSRNMHCGGISGLSTQSRVKFFDWNSEVE 190
           TSY Q E      R + +    Q+ LS G    ++ +    SG+ T SR+   D  S++E
Sbjct: 41  TSYKQDELGRKIFRSEGVSGRIQNILSNGYVPCKHFYARSSSGIYTSSRLCHIDSFSQIE 100

Query: 191 TNKL--------PGQMTLDNDANTRNAIMIQDILKSRENDFQQETTLNQRKLSVNEELIV 346
            N L          +   DND+  + A MIQ+ILKS E+  + E+ LNQ    ++E+L+V
Sbjct: 101 RNSLLNADCQMHADRTASDNDSIIKYAAMIQEILKSHESTSELESALNQFVPILSEDLVV 160

Query: 347 QVLRRHRSDW 376
           QVL+RHRSDW
Sbjct: 161 QVLQRHRSDW 170


>gb|PKA53161.1| Putative pentatricopeptide repeat-containing protein [Apostasia
           shenzhenica]
          Length = 590

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = +2

Query: 110 RNMHCGGISGLSTQSRVKFFDWNSEVETNKLPGQ----MTLDNDANTRNAIMIQDILKSR 277
           +N+H  G    + Q   +   + SE ++  +P +    M +DND+N ++AI IQDILKSR
Sbjct: 109 QNLHAEGNGCFTDQGYGERIIFRSEFQS--IPPRHSEIMDIDNDSNAKDAIKIQDILKSR 166

Query: 278 ENDFQQETTLNQRKLSVNEELIVQVLRRHRSDW 376
           E+  + E+ L++ K  + E L+VQVLRRHRSDW
Sbjct: 167 ESAHEVESILSRCKFEITEGLVVQVLRRHRSDW 199


>ref|XP_020086967.1| putative pentatricopeptide repeat-containing protein At3g15200
           [Ananas comosus]
 gb|OAY82006.1| putative pentatricopeptide repeat-containing protein [Ananas
           comosus]
          Length = 548

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 33/94 (35%), Positives = 56/94 (59%)
 Frame = +2

Query: 95  GSFSSRNMHCGGISGLSTQSRVKFFDWNSEVETNKLPGQMTLDNDANTRNAIMIQDILKS 274
           G  + R +  G  SG STQ+ +   D+ S    N     ++ DND++     MI+++LKS
Sbjct: 57  GGVNYRKLCLGSSSGFSTQAGLYQVDFISPSSDN-----LSSDNDSSVTCVNMIENVLKS 111

Query: 275 RENDFQQETTLNQRKLSVNEELIVQVLRRHRSDW 376
            + + + ET L+Q    +NE++++Q+LRRHRSD+
Sbjct: 112 IDENSELETALDQFSSKINEDVVIQILRRHRSDY 145


>gb|PKU83772.1| Putative pentatricopeptide repeat-containing protein [Dendrobium
           catenatum]
          Length = 519

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 32/91 (35%), Positives = 51/91 (56%)
 Frame = +2

Query: 104 SSRNMHCGGISGLSTQSRVKFFDWNSEVETNKLPGQMTLDNDANTRNAIMIQDILKSREN 283
           SS +++CG  +   +Q R      +  ++T         D+ +N +  +MIQ+I KS EN
Sbjct: 47  SSSSLYCGDNASSGSQDRSISQPHSEIIDT---------DDHSNAKVPVMIQNIFKSLEN 97

Query: 284 DFQQETTLNQRKLSVNEELIVQVLRRHRSDW 376
               E  +N+ KL++ E+L+VQVL RH SDW
Sbjct: 98  PHDIELAINKCKLTITEDLVVQVLLRHNSDW 128


>ref|XP_020704787.1| putative pentatricopeptide repeat-containing protein At3g15200
           [Dendrobium catenatum]
          Length = 531

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 32/91 (35%), Positives = 51/91 (56%)
 Frame = +2

Query: 104 SSRNMHCGGISGLSTQSRVKFFDWNSEVETNKLPGQMTLDNDANTRNAIMIQDILKSREN 283
           SS +++CG  +   +Q R      +  ++T         D+ +N +  +MIQ+I KS EN
Sbjct: 59  SSSSLYCGDNASSGSQDRSISQPHSEIIDT---------DDHSNAKVPVMIQNIFKSLEN 109

Query: 284 DFQQETTLNQRKLSVNEELIVQVLRRHRSDW 376
               E  +N+ KL++ E+L+VQVL RH SDW
Sbjct: 110 PHDIELAINKCKLTITEDLVVQVLLRHNSDW 140


>ref|XP_020589314.1| putative pentatricopeptide repeat-containing protein At3g15200
           isoform X1 [Phalaenopsis equestris]
 ref|XP_020589315.1| putative pentatricopeptide repeat-containing protein At3g15200
           isoform X1 [Phalaenopsis equestris]
 ref|XP_020589316.1| putative pentatricopeptide repeat-containing protein At3g15200
           isoform X1 [Phalaenopsis equestris]
 ref|XP_020589317.1| putative pentatricopeptide repeat-containing protein At3g15200
           isoform X1 [Phalaenopsis equestris]
          Length = 529

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
 Frame = +2

Query: 179 SEVETNKLPGQMTLDND--ANTRNAIMIQDILKSRENDFQQETTLNQRKLSVNEELIVQV 352
           S+V++  L     LD D  +N +  +MIQ+I KS E+    E+ +N+ KL++ E+L++QV
Sbjct: 71  SQVKSISLSCTEILDTDDRSNLKVLLMIQNIFKSNEDPHDIESAINKCKLTLTEDLVIQV 130

Query: 353 LRRHRSDW 376
           LRRH SDW
Sbjct: 131 LRRHNSDW 138


>ref|XP_020589319.1| putative pentatricopeptide repeat-containing protein At3g15200
           isoform X3 [Phalaenopsis equestris]
          Length = 488

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = +2

Query: 221 DNDANTRNAIMIQDILKSRENDFQQETTLNQRKLSVNEELIVQVLRRHRSDW 376
           D+ +N +  +MIQ+I KS E+    E+ +N+ KL++ E+L++QVLRRH SDW
Sbjct: 46  DDRSNLKVLLMIQNIFKSNEDPHDIESAINKCKLTLTEDLVIQVLRRHNSDW 97