BLASTX nr result
ID: Ophiopogon24_contig00024722
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00024722
(554 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OVA09785.1| Pentatricopeptide repeat [Macleaya cordata] 227 7e-67
gb|OAY66084.1| Pentatricopeptide repeat-containing protein [Anan... 201 7e-58
ref|XP_020092866.1| pentatricopeptide repeat-containing protein ... 201 1e-57
ref|XP_020673278.1| pentatricopeptide repeat-containing protein ... 190 4e-57
gb|PKA46700.1| Pentatricopeptide repeat-containing protein [Apos... 197 1e-56
gb|PKU61116.1| Pentatricopeptide repeat-containing protein [Dend... 190 2e-56
ref|XP_020691698.1| pentatricopeptide repeat-containing protein ... 191 4e-54
ref|XP_019078838.1| PREDICTED: pentatricopeptide repeat-containi... 185 1e-52
ref|XP_010248175.1| PREDICTED: pentatricopeptide repeat-containi... 173 2e-47
ref|XP_011622603.1| pentatricopeptide repeat-containing protein ... 172 4e-47
ref|XP_006399126.1| pentatricopeptide repeat-containing protein ... 171 9e-47
ref|XP_013670834.1| pentatricopeptide repeat-containing protein ... 169 3e-46
ref|XP_013612622.1| PREDICTED: pentatricopeptide repeat-containi... 168 1e-45
ref|XP_010557968.1| PREDICTED: pentatricopeptide repeat-containi... 167 2e-45
ref|XP_002873264.1| pentatricopeptide repeat-containing protein ... 167 3e-45
ref|XP_022549414.1| pentatricopeptide repeat-containing protein ... 166 6e-45
ref|XP_009122264.1| PREDICTED: pentatricopeptide repeat-containi... 166 6e-45
ref|XP_018446738.1| PREDICTED: pentatricopeptide repeat-containi... 166 8e-45
ref|XP_010423323.1| PREDICTED: pentatricopeptide repeat-containi... 165 2e-44
gb|OAO96373.1| hypothetical protein AXX17_AT5G06130 [Arabidopsis... 163 6e-44
>gb|OVA09785.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 779
Score = 227 bits (579), Expect = 7e-67
Identities = 111/183 (60%), Positives = 139/183 (75%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FS I PD F N LIRAYA NP+ A+ FY+ IL+S +L RPD H+FPLLL+AC E+
Sbjct: 92 FSHIHKPDIFTFNTLIRAYAFSSNPIDAILFYTHILES-SLLRPDIHSFPLLLKACLEIP 150
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
S+ LG +H+Q GL S VS+ NFLVQMYA+CGLIG+A++ FD I +YDDASWN+M+
Sbjct: 151 SLSLGKAIHSQVYKLGLSSQVSILNFLVQMYASCGLIGSAKLAFDRIPEYDDASWNIMMG 210
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G LKCG FE A +MFD M +++ +SWSVMINGYV+++ FKEGLELF+ ML E VEPNESV
Sbjct: 211 GFLKCGDFESACEMFDEMPDKNAVSWSVMINGYVQNNSFKEGLELFQEMLKEKVEPNESV 270
Query: 543 YVN 551
VN
Sbjct: 271 LVN 273
Score = 72.8 bits (177), Expect = 1e-11
Identities = 45/184 (24%), Positives = 82/184 (44%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
F ++ + + +++I Y + L+ + ++L+ P+ L ACA +G
Sbjct: 225 FDEMPDKNAVSWSVMINGYVQNNSFKEGLELFQEMLKEKV--EPNESVLVNALYACAHLG 282
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
++ELG + + V + L+ MY+
Sbjct: 283 ALELGKWIEGYLRKKSIRFTVRLSTSLIDMYS---------------------------- 314
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
KCGC ++A ++FD M E++VL+WS MI G + + K+ L+LF +M GV+PNE
Sbjct: 315 ---KCGCVDKALEIFDEMKEKNVLAWSAMIGGLAINGQGKDALQLFSQMDLNGVKPNEVT 371
Query: 543 YVNV 554
++ V
Sbjct: 372 FIGV 375
>gb|OAY66084.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 651
Score = 201 bits (511), Expect = 7e-58
Identities = 104/186 (55%), Positives = 130/186 (69%), Gaps = 3/186 (1%)
Frame = +3
Query: 6 SQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRR---PDAHTFPLLLRACAE 176
+Q +PDPF N L+RA+A P+P AL+FY+ L+S A P+ TFP++L+AC+
Sbjct: 100 AQTPSPDPFALNALLRAHALRPDPFGALRFYTDALRSPAAAEFSFPNPRTFPIILKACSL 159
Query: 177 VGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVM 356
++ G MVHAQ V GLGS SVQNFLV MYA+CG I ARI FD I + + AS N+M
Sbjct: 160 APALRFGEMVHAQVVKVGLGSAASVQNFLVYMYASCGRIELARIAFDAISELNAASMNMM 219
Query: 357 LNGMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNE 536
L+ +KCG +ARK+FD M ERDVL WSV+INGYV+DS FKEGL LFR ML E EPNE
Sbjct: 220 LDAYVKCGHLGDARKVFDEMPERDVLCWSVLINGYVQDSHFKEGLVLFRAMLGENKEPNE 279
Query: 537 SVYVNV 554
S+ VNV
Sbjct: 280 SILVNV 285
Score = 68.6 bits (166), Expect = 4e-10
Identities = 48/184 (26%), Positives = 77/184 (41%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
F ++ D ++LI Y + L + +L + P+ +L ACA +G
Sbjct: 236 FDEMPERDVLCWSVLINGYVQDSHFKEGLVLFRAMLGEN--KEPNESILVNVLSACAHLG 293
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
++E G+ V + V + L+ MY
Sbjct: 294 AIEQGMWVEGYVKKKSIRLSVRLGTALLDMY----------------------------- 324
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
LKCGC E+A ++F M ER+V +WS MI G + + K+ L LF +M +G+ PNE
Sbjct: 325 --LKCGCVEKAFEVFRTMEERNVTTWSAMIGGLAVNGQAKDALGLFSQMEFDGIIPNEVT 382
Query: 543 YVNV 554
+V V
Sbjct: 383 FVGV 386
>ref|XP_020092866.1| pentatricopeptide repeat-containing protein At5g66520-like [Ananas
comosus]
Length = 671
Score = 201 bits (511), Expect = 1e-57
Identities = 104/186 (55%), Positives = 130/186 (69%), Gaps = 3/186 (1%)
Frame = +3
Query: 6 SQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRR---PDAHTFPLLLRACAE 176
+Q +PDPF N L+RA+A P+P AL+FY+ L+S A P+ TFP++L+AC+
Sbjct: 120 AQTPSPDPFALNALLRAHALRPDPFGALRFYADALRSPAAAEFSFPNPRTFPIILKACSL 179
Query: 177 VGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVM 356
++ G MVHAQ V GLGS SVQNFLV MYA+CG I ARI FD I + + AS N+M
Sbjct: 180 APALRFGEMVHAQVVKVGLGSAASVQNFLVYMYASCGRIELARIAFDAISELNAASMNMM 239
Query: 357 LNGMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNE 536
L+ +KCG +ARK+FD M ERDVL WSV+INGYV+DS FKEGL LFR ML E EPNE
Sbjct: 240 LDAYVKCGHLGDARKVFDEMPERDVLCWSVLINGYVQDSHFKEGLVLFRAMLGENKEPNE 299
Query: 537 SVYVNV 554
S+ VNV
Sbjct: 300 SILVNV 305
Score = 68.2 bits (165), Expect = 5e-10
Identities = 48/184 (26%), Positives = 76/184 (41%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
F ++ D ++LI Y + L + +L + P+ +L ACA +G
Sbjct: 256 FDEMPERDVLCWSVLINGYVQDSHFKEGLVLFRAMLGEN--KEPNESILVNVLSACAHLG 313
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
++E G+ V + V + L+ MY
Sbjct: 314 AIEQGMWVEGYVKKKSIRLSVRLGTALLDMY----------------------------- 344
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
LKCGC E+A ++F M ER+V +WS MI G + K+ L LF +M +G+ PNE
Sbjct: 345 --LKCGCVEKAFEVFRTMEERNVTTWSAMIGGLAVNGHAKDALGLFSQMEFDGIIPNEVT 402
Query: 543 YVNV 554
+V V
Sbjct: 403 FVGV 406
>ref|XP_020673278.1| pentatricopeptide repeat-containing protein At5g06540-like
[Dendrobium catenatum]
Length = 276
Score = 190 bits (482), Expect = 4e-57
Identities = 95/177 (53%), Positives = 127/177 (71%)
Frame = +3
Query: 24 DPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVGSVELGLM 203
+ F+ANIL+RAYAS PN + AL F+ + L+S L PDA T L+L+A A+ G + G M
Sbjct: 82 EAFMANILLRAYASLPNTIPALSFFVESLESSRLHHPDATTLALILKASADAGDLSFGKM 141
Query: 204 VHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLNGMLKCGC 383
VHA A+ SDVSVQNFLV++YA+ LI +A++VFD I +DAS N+ML LKCG
Sbjct: 142 VHAMALKLAQASDVSVQNFLVRIYASFRLIESAKLVFDSISNSNDASRNIMLGAYLKCGL 201
Query: 384 FEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESVYVNV 554
++AR++FD M + V+SWSVMING +++RF E LELF +ML E +EPNES+YVNV
Sbjct: 202 LDDARQVFDDMPGKGVISWSVMINGLFQNNRFSEALELFNKMLMEKMEPNESIYVNV 258
>gb|PKA46700.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 627
Score = 197 bits (501), Expect = 1e-56
Identities = 95/184 (51%), Positives = 133/184 (72%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
F+ D F+ NIL+RAYAS NP A+ F+++ L+S + RP T L+L+A ++ G
Sbjct: 78 FAATAKADAFMFNILLRAYASLSNPAEAVVFFAEALESSRISRPGHRTLALVLKAASDTG 137
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
++ +G M+H AV L +DVSVQNFLV+MY++ LI AR+VFDGI +D+AS N+M+
Sbjct: 138 ALAVGKMLHGMAVKLALAADVSVQNFLVRMYSSFRLIEPARLVFDGISDFDEASKNIMIG 197
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G LKCG F++AR+MFD M ++ V+SWSVMING+V+ S+F+ LELFR ML ++PNESV
Sbjct: 198 GFLKCGLFDDARQMFDEMPQKGVISWSVMINGFVQSSQFRGALELFREMLRREIDPNESV 257
Query: 543 YVNV 554
YVNV
Sbjct: 258 YVNV 261
Score = 64.3 bits (155), Expect = 1e-08
Identities = 45/172 (26%), Positives = 72/172 (41%)
Frame = +3
Query: 39 NILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQA 218
+++I + AL+ + ++L+ P+ + + ACA +GSVE G V
Sbjct: 224 SVMINGFVQSSQFRGALELFREMLRREI--DPNESVYVNVFSACAHLGSVEQGRWVENYM 281
Query: 219 VTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLNGMLKCGCFEEAR 398
G V + L+ MY LKCGC E+A
Sbjct: 282 RKKGFVVTVRIGTALIDMY-------------------------------LKCGCVEKAF 310
Query: 399 KMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESVYVNV 554
+F+ M ++ L+WS MI G + ++ L LF M A G++PNE +V V
Sbjct: 311 DVFNSMERKNSLTWSAMIGGLAVNGHGEDSLMLFSLMEAAGIQPNEVTFVGV 362
>gb|PKU61116.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 342
Score = 190 bits (482), Expect = 2e-56
Identities = 95/177 (53%), Positives = 127/177 (71%)
Frame = +3
Query: 24 DPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVGSVELGLM 203
+ F+ANIL+RAYAS PN + AL F+ + L+S L PDA T L+L+A A+ G + G M
Sbjct: 82 EAFMANILLRAYASLPNTIPALSFFVESLESSRLHHPDATTLALILKASADAGDLSFGKM 141
Query: 204 VHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLNGMLKCGC 383
VHA A+ SDVSVQNFLV++YA+ LI +A++VFD I +DAS N+ML LKCG
Sbjct: 142 VHAMALKLAQASDVSVQNFLVRIYASFRLIESAKLVFDSISNSNDASRNIMLGAYLKCGL 201
Query: 384 FEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESVYVNV 554
++AR++FD M + V+SWSVMING +++RF E LELF +ML E +EPNES+YVNV
Sbjct: 202 LDDARQVFDDMPGKGVISWSVMINGLFQNNRFSEALELFNKMLMEKMEPNESIYVNV 258
>ref|XP_020691698.1| pentatricopeptide repeat-containing protein At5g06540-like
[Dendrobium catenatum]
gb|PKU87528.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 624
Score = 191 bits (484), Expect = 4e-54
Identities = 95/177 (53%), Positives = 127/177 (71%)
Frame = +3
Query: 24 DPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVGSVELGLM 203
D F+ANIL+RAYAS PN AL F+ + L+S L PDA T L L+A A+ G + G M
Sbjct: 82 DAFMANILLRAYASLPNTNSALSFFVESLESSRLHHPDATTLALALKASADAGDLSFGKM 141
Query: 204 VHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLNGMLKCGC 383
VHA A+ SDVSVQNFLV++YA+ LI +A++VFD I ++DAS N+ML LKC
Sbjct: 142 VHAMALKLAQASDVSVQNFLVRIYASFRLIESAKLVFDSISNFNDASRNIMLGAYLKCDL 201
Query: 384 FEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESVYVNV 554
++AR++FD M + V+SWSVMING V+++RF+E LELF +ML E +EPNES+YVN+
Sbjct: 202 LDDARQLFDDMPVKGVISWSVMINGLVQNNRFREALELFNKMLMEKMEPNESIYVNI 258
Score = 62.4 bits (150), Expect = 5e-08
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 1/173 (0%)
Frame = +3
Query: 39 NILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQA 218
+++I AL+ ++++L + P+ + + CA +G++E G V
Sbjct: 221 SVMINGLVQNNRFREALELFNKML--MEKMEPNESIYVNIFSICAHLGAIEQGRWV---- 274
Query: 219 VTFGLGSDVSVQNFLVQM-YAACGLIGAARIVFDGIEKYDDASWNVMLNGMLKCGCFEEA 395
+N+L++ + IG A M++ LKCGC E A
Sbjct: 275 -----------ENYLLKKDFTVTVRIGTA-----------------MIDMYLKCGCVENA 306
Query: 396 RKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESVYVNV 554
+FD M E++ ++WS MI G + R ++ L+LF M G+ PNE ++ V
Sbjct: 307 FNVFDLMQEKNSMTWSAMITGLAINGRAEDSLKLFSLMELSGISPNEVTFIGV 359
>ref|XP_019078838.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 515
Score = 185 bits (469), Expect = 1e-52
Identities = 86/140 (61%), Positives = 109/140 (77%)
Frame = +3
Query: 132 PDAHTFPLLLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIV 311
PD HTFPLLL+AC+E+ S+ LG +H+ G S+VSV NFLVQMYA+CGLI +A +V
Sbjct: 9 PDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLV 68
Query: 312 FDGIEKYDDASWNVMLNGMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGL 491
FD + D ASWN+M+ G LKCG F+ AR+MF+ M +RDV+SWSVMINGYV++SRFKEGL
Sbjct: 69 FDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGL 128
Query: 492 ELFRRMLAEGVEPNESVYVN 551
LF+ M+ E +EPNESV VN
Sbjct: 129 GLFQDMMGEKIEPNESVLVN 148
Score = 62.8 bits (151), Expect = 4e-08
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Frame = +3
Query: 252 QNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLNGML---------KCGCFEEARKM 404
++ LV +AC +GA IE+Y + NV L L KCG E A ++
Sbjct: 143 ESVLVNALSACAHLGAME-QGQWIERYMERK-NVRLTVRLGTALIDMYSKCGSVERALEV 200
Query: 405 FDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESVYVNV 554
F M E++VL+WS MING + + K+ L LF +M +GV+PNE ++ +
Sbjct: 201 FHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGI 250
>ref|XP_010248175.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Nelumbo nucifera]
Length = 629
Score = 173 bits (438), Expect = 2e-47
Identities = 87/184 (47%), Positives = 120/184 (65%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FSQI NP+ FI N ++R Y+ NP ++ QFY ++ Q L PD TFP L+++CAE G
Sbjct: 82 FSQIQNPNLFIYNAMVRVYSGSKNPQQSFQFYRKLQQEGLL--PDNLTFPYLVKSCAEFG 139
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
V +G+ Q + G SDV VQN LV MYA CG IG A +F GI D SW M+
Sbjct: 140 CVGMGIQALGQIIKHGFESDVYVQNSLVHMYATCGDIGTANRIFRGIYHLDVVSWTSMIA 199
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G KCG E AR++FD M ER++++WS+MINGYV++ F + +ELF+ + +EGV+ NE+V
Sbjct: 200 GYNKCGDVESARRLFDKMPERNLVTWSIMINGYVRNHHFNKAIELFQVLQSEGVQANETV 259
Query: 543 YVNV 554
V+V
Sbjct: 260 MVSV 263
Score = 58.5 bits (140), Expect = 1e-06
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Frame = +3
Query: 39 NILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVGSVELGLMVHAQA 218
+I+I Y + +A++ + Q+LQS ++ + ++ ACA +G++E G H
Sbjct: 226 SIMINGYVRNHHFNKAIELF-QVLQSEGVQANET-VMVSVIAACAHLGALEQGEKAHNYV 283
Query: 219 VTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLNGMLKCGCFEEAR 398
+ L ++ + LV MYA CG I A VF+ + + D SW ++ G+ G ++A
Sbjct: 284 LRHKLNVNLILGTALVDMYARCGSIQKAIRVFEELPERDTLSWTAVIAGLAMHGHADKAL 343
Query: 399 KMFD-----GMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAE-GVEPNESVY 545
+ F G++ RD+ +++ +++ G ++F M E +EP Y
Sbjct: 344 EYFSEMLKTGITPRDI-TFTAVLSACSHGGLVDRGFQIFESMEREYEIEPRLEHY 397
>ref|XP_011622603.1| pentatricopeptide repeat-containing protein At3g62890-like
[Amborella trichopoda]
Length = 646
Score = 172 bits (436), Expect = 4e-47
Identities = 93/185 (50%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPN-PLRALQFYSQILQSLALRRPDAHTFPLLLRACAEV 179
F + PD F+AN LIR+Y S PL+AL+FY +L S PD HT PL+LRAC++
Sbjct: 98 FRSLPYPDTFMANTLIRSYTSVYGAPLQALEFYVLVLSSGI--NPDIHTLPLVLRACSDA 155
Query: 180 GSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVML 359
G++ LG +HA + G + +V NF+V+MY+ CG I AR VFD + + DDASWNVML
Sbjct: 156 GALSLGSALHAYVIKRGWTNYSNVTNFVVKMYSECGSIELARRVFDEMLQLDDASWNVML 215
Query: 360 NGMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNES 539
G G EEA+ F+ M E DV+SWSVMI G + S+F+E L LFR ML G+ PNES
Sbjct: 216 GGYANNGMLEEAQGFFEQMPEHDVISWSVMITGLCRQSKFREALMLFRDMLEMGISPNES 275
Query: 540 VYVNV 554
V VNV
Sbjct: 276 VTVNV 280
Score = 67.4 bits (163), Expect = 1e-09
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
F ++ D N+++ YA+ A F+ Q+ + D ++ +++
Sbjct: 200 FDEMLQLDDASWNVMLGGYANNGMLEEAQGFFEQMPEH------DVISWSVMITGLCRQS 253
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDD---ASWNV 353
LM+ + G+ + SV V + +AC +GA + YD+ AS V
Sbjct: 254 KFREALMLFRDMLEMGISPNESVT---VNVLSACAYLGALD-QGKWLHAYDERKRASLTV 309
Query: 354 -----MLNGMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAE 518
+++ KCGC +EA K+F GM ER+VL+WS MI G + R + L LF M
Sbjct: 310 KTGTALIDMYAKCGCIDEALKVFHGMKERNVLAWSAMIVGLAANGRPDDALGLFSLMEDS 369
Query: 519 GVEPNESVYVNV 554
V+PN+ ++ V
Sbjct: 370 CVKPNDVTFIGV 381
>ref|XP_006399126.1| pentatricopeptide repeat-containing protein At5g06540 [Eutrema
salsugineum]
gb|ESQ40579.1| hypothetical protein EUTSA_v10015670mg [Eutrema salsugineum]
Length = 620
Score = 171 bits (433), Expect = 9e-47
Identities = 88/184 (47%), Positives = 122/184 (66%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FSQI NP+ F+ N+LIR ++ G P RA FY+Q+L+S RPD TFP L++A E+
Sbjct: 74 FSQIQNPNLFVFNLLIRGFSIGAEPSRAFGFYTQMLKSCI--RPDNITFPFLVKASTEME 131
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
V +G H+Q V FG +DV V+N LV MYA CGLIGAA +F ++ D SW M+
Sbjct: 132 CVTMGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIGAAGRIFGQMKFRDVVSWTSMVA 191
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G KCG ++AR+MFD M R++++WS+MINGY K++ F + ++LF M EGV NE+V
Sbjct: 192 GYCKCGMADDAREMFDEMPHRNLVTWSIMINGYAKNNCFDKAIQLFELMKREGVVANETV 251
Query: 543 YVNV 554
V+V
Sbjct: 252 MVSV 255
>ref|XP_013670834.1| pentatricopeptide repeat-containing protein At5g06540-like
[Brassica napus]
Length = 612
Score = 169 bits (429), Expect = 3e-46
Identities = 85/184 (46%), Positives = 122/184 (66%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FSQI +P+ F+ N+LIR++++ P P +A FY+Q+L+ PD TFP L++A AE+
Sbjct: 66 FSQIQSPNLFVFNLLIRSFSTSPEPSKAYNFYTQMLRLCI--PPDNITFPFLIKASAEME 123
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
V G +H+ V FG +DV V+N LV MYA CG I +A VF G+ + SW M++
Sbjct: 124 CVRTGAQIHSHIVRFGFHNDVYVENSLVHMYATCGSIASAGRVFGGMPFRNVVSWTSMVD 183
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G KCG ++AR+MFD M R++++WS+MINGY K +RF+E +ELF M EGV NE+V
Sbjct: 184 GYCKCGLVDDAREMFDEMPHRNLVTWSIMINGYAKSNRFEEAVELFEVMQREGVVANETV 243
Query: 543 YVNV 554
V+V
Sbjct: 244 MVSV 247
>ref|XP_013612622.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Brassica oleracea var. oleracea]
Length = 612
Score = 168 bits (425), Expect = 1e-45
Identities = 84/184 (45%), Positives = 121/184 (65%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FSQI +P+ F+ N+LIR +++ P P +A FY+Q+L+ PD TFP L++A AE+
Sbjct: 66 FSQIQSPNLFVFNLLIRTFSTSPEPSKAYNFYTQMLRLCI--PPDNITFPFLIKASAEME 123
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
V G +H+ V FG +DV +N LV MYA CG I +A VF G+ + SW M++
Sbjct: 124 CVGTGAQIHSHIVRFGFHNDVYAENSLVHMYATCGSIASAGRVFGGMSYRNVVSWTSMVD 183
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G KCG ++AR+MFD M R++++WS+MINGY K++RF+E +ELF M EGV NE+V
Sbjct: 184 GYCKCGLVDDAREMFDEMPHRNLVTWSIMINGYAKNNRFEEAVELFEVMQREGVVANETV 243
Query: 543 YVNV 554
V+V
Sbjct: 244 MVSV 247
>ref|XP_010557968.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540
isoform X1 [Tarenaya hassleriana]
Length = 622
Score = 167 bits (423), Expect = 2e-45
Identities = 87/184 (47%), Positives = 122/184 (66%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
F+QI +P+ FI N LIR ++SG +P R FY+Q+L+S D TFP L++ACAE+G
Sbjct: 75 FTQIRHPNIFIFNALIRGFSSGEDPSRVFGFYTQMLESGICS--DNITFPFLVKACAELG 132
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
SV LG +HA V FG +DV V+N LV MY CG + +A +F ++ D SW M+
Sbjct: 133 SVRLGGQIHAHVVQFGFENDVYVENSLVHMYVNCGSVSSADRIFKQMQFRDVVSWTSMVA 192
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G K G + ARKMFD M ER++++WSVMINGYVK++ F + +ELF M +G++ NE+V
Sbjct: 193 GYCKRGDIDTARKMFDEMPERNLVTWSVMINGYVKNNCFVKAIELFESMKRKGIQANETV 252
Query: 543 YVNV 554
V+V
Sbjct: 253 MVSV 256
Score = 59.3 bits (142), Expect = 6e-07
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Frame = +3
Query: 156 LLRACAEVGSVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYD 335
++ +CA +G +ELG H V L +V + LV MYA CG I A VF+ + + D
Sbjct: 256 VISSCAHLGGLELGEKAHDYVVKNNLTVNVILGTALVDMYARCGNIEKAIRVFEELPEKD 315
Query: 336 DASWNVMLNGMLKCGCFEEARKMFD-----GMSERDVLSWSVMINGYVKDSRFKEGLELF 500
SW +++G+ G EA F G + RD+ +++ +++ GLE++
Sbjct: 316 SLSWTSIISGLAMYGHGNEAIHYFSEMVRLGFTPRDI-TFTAVLSACSHGGLVDRGLEIY 374
Query: 501 RRMLAE-GVEPNESVY 545
M + G+EP Y
Sbjct: 375 ESMKRDHGIEPRLEHY 390
>ref|XP_002873264.1| pentatricopeptide repeat-containing protein At5g06540 [Arabidopsis
lyrata subsp. lyrata]
gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 167 bits (422), Expect = 3e-45
Identities = 86/184 (46%), Positives = 120/184 (65%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FSQI NP+ F+ N+LIR +++G P +A FY+Q+L+S PD TFP L++A E+
Sbjct: 76 FSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIW--PDNITFPFLIKASTEME 133
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
V +G H+Q V FG +DV V+N LV MYA CGLI AA +F + D SW M+
Sbjct: 134 CVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVA 193
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G KCG E+AR+MFD M R++ +WS+MINGY K++ F++ ++LF M EGV NE+V
Sbjct: 194 GYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETV 253
Query: 543 YVNV 554
V+V
Sbjct: 254 MVSV 257
>ref|XP_022549414.1| pentatricopeptide repeat-containing protein At5g06540-like
[Brassica napus]
Length = 612
Score = 166 bits (420), Expect = 6e-45
Identities = 84/184 (45%), Positives = 120/184 (65%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FSQI +P+ F+ N+LIR +++ P +A FY+Q+L+ PD TFP L++A AE+
Sbjct: 66 FSQIQSPNLFVFNLLIRTFSTSPEASKAYNFYTQMLRLCI--PPDNITFPFLIKASAEME 123
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
V G +H+ V FG +DV V+N LV MYA CGLI +A VF + + SW M++
Sbjct: 124 CVRTGEQIHSHVVRFGFHNDVYVENSLVHMYATCGLIASAGRVFGAMSFRNVVSWTSMVD 183
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G KCG ++AR+MFD M R++++WS+MINGY K +RF+E +ELF M EGV NE+V
Sbjct: 184 GYCKCGLVDDAREMFDEMPHRNLVTWSIMINGYAKSNRFEEAVELFEVMKREGVVANETV 243
Query: 543 YVNV 554
V+V
Sbjct: 244 MVSV 247
>ref|XP_009122264.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Brassica rapa]
Length = 612
Score = 166 bits (420), Expect = 6e-45
Identities = 84/184 (45%), Positives = 120/184 (65%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FSQI +P+ F+ N+LIR +++ P +A FY+Q+L+ PD TFP L++A AE+
Sbjct: 66 FSQIQSPNLFVFNLLIRTFSTSPEASKAYNFYTQMLRLCI--PPDNITFPFLIKASAEME 123
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
V G +H+ V FG +DV V+N LV MYA CGLI +A VF + + SW M++
Sbjct: 124 CVRTGEQIHSHVVRFGFHNDVYVENSLVHMYATCGLIASAGRVFGAMSFRNVVSWTSMVD 183
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G KCG ++AR+MFD M R++++WS+MINGY K +RF+E +ELF M EGV NE+V
Sbjct: 184 GYCKCGLVDDAREMFDEMPHRNLVTWSIMINGYAKSNRFEEAVELFEVMRREGVVANETV 243
Query: 543 YVNV 554
V+V
Sbjct: 244 MVSV 247
>ref|XP_018446738.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Raphanus sativus]
Length = 617
Score = 166 bits (419), Expect = 8e-45
Identities = 89/186 (47%), Positives = 126/186 (67%), Gaps = 2/186 (1%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FSQI +P+ F+ N+LIR +++ P P +A FY+Q+L SL +R PD TFP L++A AE+
Sbjct: 65 FSQIQSPNLFVFNLLIRTFSTSPEPSKAYNFYTQML-SLRIR-PDNITFPFLVKASAEME 122
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACG--LIGAARIVFDGIEKYDDASWNVM 356
S+ G +H+ V FG +DV V+N LV MYAACG I AA VF G+ D SW M
Sbjct: 123 SLTSGEQIHSHIVRFGFHNDVYVENSLVHMYAACGPSSIVAAGRVFGGMSFRDVVSWTSM 182
Query: 357 LNGMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNE 536
++G +CG ++AR+MFD M R++++WS+MINGYVK+ F++ +ELF M EGV NE
Sbjct: 183 VDGYCRCGSVDDAREMFDEMPHRNLVTWSIMINGYVKNKCFEKAVELFEVMKREGVVANE 242
Query: 537 SVYVNV 554
+V V+V
Sbjct: 243 TVMVSV 248
>ref|XP_010423323.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Camelina sativa]
Length = 622
Score = 165 bits (417), Expect = 2e-44
Identities = 85/184 (46%), Positives = 118/184 (64%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FSQI P+ F+ N+LIR +++G P RA FY+ +L S PD TFP L++A E+G
Sbjct: 74 FSQIQYPNLFVFNLLIRCFSTGAEPNRAFGFYTHMLNSRIC--PDNITFPFLIKASTEMG 131
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
V +G H+Q V FG +DV V+N LV MYA CGLI +A +F + D SW M+
Sbjct: 132 CVTIGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLISSAGRIFGQMPFRDVVSWTSMVA 191
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G KCG E+AR+MFD M R++ +WS+MINGY K++ F++ ++LF M EGV NE+V
Sbjct: 192 GYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETV 251
Query: 543 YVNV 554
V+V
Sbjct: 252 MVSV 255
>gb|OAO96373.1| hypothetical protein AXX17_AT5G06130 [Arabidopsis thaliana]
Length = 622
Score = 163 bits (413), Expect = 6e-44
Identities = 85/184 (46%), Positives = 119/184 (64%)
Frame = +3
Query: 3 FSQITNPDPFIANILIRAYASGPNPLRALQFYSQILQSLALRRPDAHTFPLLLRACAEVG 182
FSQI NP+ F+ N+LIR +++G P +A FY+Q+L+S PD TFP L++A +E+
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIW--PDNITFPFLIKASSEME 131
Query: 183 SVELGLMVHAQAVTFGLGSDVSVQNFLVQMYAACGLIGAARIVFDGIEKYDDASWNVMLN 362
V +G H+Q V FG +DV V+N LV MYA CG I AA +F + D SW M+
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 363 GMLKCGCFEEARKMFDGMSERDVLSWSVMINGYVKDSRFKEGLELFRRMLAEGVEPNESV 542
G KCG E AR+MFD M R++ +WS+MINGY K++ F++ ++LF M EGV NE+V
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 543 YVNV 554
V+V
Sbjct: 252 MVSV 255