BLASTX nr result
ID: Ophiopogon24_contig00024687
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00024687
(350 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK65902.1| uncharacterized protein A4U43_C06F2150 [Asparagus... 135 2e-34
ref|XP_020269462.1| LOW QUALITY PROTEIN: uncharacterized protein... 135 2e-34
ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 105 6e-24
ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 97 5e-21
ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage fact... 92 2e-19
ref|XP_008808984.1| PREDICTED: polyadenylation and cleavage fact... 90 2e-18
ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage fact... 90 2e-18
ref|XP_018683567.1| PREDICTED: polyadenylation and cleavage fact... 66 3e-10
ref|XP_009404994.1| PREDICTED: polyadenylation and cleavage fact... 66 3e-10
ref|XP_009404993.1| PREDICTED: polyadenylation and cleavage fact... 66 3e-10
ref|XP_009404992.1| PREDICTED: polyadenylation and cleavage fact... 66 3e-10
ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage fact... 55 4e-06
ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage fact... 55 4e-06
>gb|ONK65902.1| uncharacterized protein A4U43_C06F2150 [Asparagus officinalis]
Length = 1031
Score = 135 bits (340), Expect = 2e-34
Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Frame = -1
Query: 350 PQMPVPISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFS 174
P++P+PI I NGQKLP YD+PP++ VP+Q+L N S+SLN E SMLEK LELRPFS
Sbjct: 628 PRIPLPIDRIAADNGQKLPIPYDSPPEVEVPHQKLSNVHSSSLNTEASMLEKRLELRPFS 687
Query: 173 XXXXXXXXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNKPFNQGHNPSLF 21
PVHKSQPLPL PVP YQ+QF + SLMES+KP NQG NP++F
Sbjct: 688 PPTAPVLWPPVHKSQPLPLFPVPPYQKQFENTSSLMESSKPINQGLNPAIF 738
>ref|XP_020269462.1| LOW QUALITY PROTEIN: uncharacterized protein LOC109844760 [Asparagus
officinalis]
Length = 1407
Score = 135 bits (340), Expect = 2e-34
Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Frame = -1
Query: 350 PQMPVPISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFS 174
P++P+PI I NGQKLP YD+PP++ VP+Q+L N S+SLN E SMLEK LELRPFS
Sbjct: 972 PRIPLPIDRIAADNGQKLPIPYDSPPEVEVPHQKLSNVHSSSLNTEASMLEKRLELRPFS 1031
Query: 173 XXXXXXXXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNKPFNQGHNPSLF 21
PVHKSQPLPL PVP YQ+QF + SLMES+KP NQG NP++F
Sbjct: 1032 PPTAPVLWPPVHKSQPLPLFPVPPYQKQFENTSSLMESSKPINQGLNPAIF 1082
>ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4 [Elaeis guineensis]
Length = 1070
Score = 105 bits (262), Expect = 6e-24
Identities = 59/116 (50%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = -1
Query: 347 QMPVPISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFSX 171
QMPV SGIT G KLP+ Y+N PD+ V +Q L ++ S+ NV+TS LE++L RP S
Sbjct: 613 QMPVAASGITPSIGNKLPNLYENTPDMEVAFQTLSSSHSDPFNVDTSTLERYLPQRPHSP 672
Query: 170 XXXXXXXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNKP-FNQGHNPSLFPSLQQ 6
PVHKSQPLPLLPVP Q+Q +SPF +E+NKP NQG S + S Q
Sbjct: 673 PHAPTVWPPVHKSQPLPLLPVPPNQKQCKSPFDFLEANKPLLNQGPESSFYFSQHQ 728
>ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4-like [Phoenix dactylifera]
Length = 1063
Score = 97.1 bits (240), Expect = 5e-21
Identities = 56/117 (47%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Frame = -1
Query: 350 PQMPVPISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFS 174
PQMPV SGIT G KLP+ Y+N PD+ V +Q L ++ SN NV+TS LE +L P S
Sbjct: 610 PQMPVAASGITPPIGNKLPNLYENTPDMEVAFQELSSSHSNPFNVDTSTLEIYLPQIPHS 669
Query: 173 XXXXXXXXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNKP-FNQGHNPSLFPSLQQ 6
PVHKS+ LPLLP+ Q+QF+SPF +E++KP NQG S + S Q
Sbjct: 670 PPPAPIIWPPVHKSEALPLLPILPNQKQFKSPFDFLEASKPLLNQGLESSFYFSQHQ 726
>ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Elaeis guineensis]
Length = 1053
Score = 92.4 bits (228), Expect = 2e-19
Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Frame = -1
Query: 347 QMPVPISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFSX 171
QMPV SGIT KLPS Y++ D+ VP+QRL ++ S+ +V+TS LE+HL RP S
Sbjct: 596 QMPVAASGITPLVINKLPSPYEHTTDLEVPFQRLSSSHSDPFDVDTSTLERHLTQRPHSP 655
Query: 170 XXXXXXXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNKPFNQGHNPSLFPSLQQF 3
PVH +Q LPLLP+P Q+QF+S F +E+NKP P F +L Q+
Sbjct: 656 PPAPIIWPPVHNTQQLPLLPIPPNQKQFKSSFDHVEANKPI-LNQRPESFFNLSQY 710
>ref|XP_008808984.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X2 [Phoenix dactylifera]
Length = 977
Score = 89.7 bits (221), Expect = 2e-18
Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Frame = -1
Query: 347 QMPVPISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFSX 171
QMPV SGIT KLPS Y++ D+ VP+ RL ++ S+ +V+TS LE+HL RP S
Sbjct: 534 QMPVAASGITSLVSNKLPSPYEHTTDMEVPFSRLSSSHSDPFDVDTSTLERHLAQRPHSP 593
Query: 170 XXXXXXXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNKPFNQGHNPSLFPSLQQF 3
VH +Q LPLLP+P Q+Q +SPF +E++KP P F L Q+
Sbjct: 594 PPPPIVRPSVHNNQQLPLLPIPPNQKQLKSPFDDVEAHKPI-PNQRPESFLYLSQY 648
>ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Phoenix dactylifera]
ref|XP_008808981.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Phoenix dactylifera]
ref|XP_008808982.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Phoenix dactylifera]
ref|XP_008808983.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Phoenix dactylifera]
Length = 1065
Score = 89.7 bits (221), Expect = 2e-18
Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Frame = -1
Query: 347 QMPVPISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFSX 171
QMPV SGIT KLPS Y++ D+ VP+ RL ++ S+ +V+TS LE+HL RP S
Sbjct: 622 QMPVAASGITSLVSNKLPSPYEHTTDMEVPFSRLSSSHSDPFDVDTSTLERHLAQRPHSP 681
Query: 170 XXXXXXXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNKPFNQGHNPSLFPSLQQF 3
VH +Q LPLLP+P Q+Q +SPF +E++KP P F L Q+
Sbjct: 682 PPPPIVRPSVHNNQQLPLLPIPPNQKQLKSPFDDVEAHKPI-PNQRPESFLYLSQY 736
>ref|XP_018683567.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X4 [Musa acuminata subsp. malaccensis]
Length = 838
Score = 66.2 bits (160), Expect = 3e-10
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = -1
Query: 332 ISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFSXXXXXX 156
+ G+ GQKLP ++D+ PDI +P + L NA + L + T+++++ LRP+S
Sbjct: 389 LGGVAPSIGQKLPVAHDSLPDIELPLRSLSNAHDDPLKINTAVIDRQSTLRPYS--PPQD 446
Query: 155 XXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNK-PFNQGHNPSLFPSLQQF 3
HKSQ LP L +P Q+ + E NK NQG +P +F +Q+
Sbjct: 447 MLPSAHKSQSLPCLSIPPNQKLVNGQLDISEPNKLLMNQGADPRIFVPEKQY 498
>ref|XP_009404994.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X3 [Musa acuminata subsp. malaccensis]
Length = 956
Score = 66.2 bits (160), Expect = 3e-10
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = -1
Query: 332 ISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFSXXXXXX 156
+ G+ GQKLP ++D+ PDI +P + L NA + L + T+++++ LRP+S
Sbjct: 507 LGGVAPSIGQKLPVAHDSLPDIELPLRSLSNAHDDPLKINTAVIDRQSTLRPYS--PPQD 564
Query: 155 XXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNK-PFNQGHNPSLFPSLQQF 3
HKSQ LP L +P Q+ + E NK NQG +P +F +Q+
Sbjct: 565 MLPSAHKSQSLPCLSIPPNQKLVNGQLDISEPNKLLMNQGADPRIFVPEKQY 616
>ref|XP_009404993.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 956
Score = 66.2 bits (160), Expect = 3e-10
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = -1
Query: 332 ISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFSXXXXXX 156
+ G+ GQKLP ++D+ PDI +P + L NA + L + T+++++ LRP+S
Sbjct: 507 LGGVAPSIGQKLPVAHDSLPDIELPLRSLSNAHDDPLKINTAVIDRQSTLRPYS--PPQD 564
Query: 155 XXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNK-PFNQGHNPSLFPSLQQF 3
HKSQ LP L +P Q+ + E NK NQG +P +F +Q+
Sbjct: 565 MLPSAHKSQSLPCLSIPPNQKLVNGQLDISEPNKLLMNQGADPRIFVPEKQY 616
>ref|XP_009404992.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 991
Score = 66.2 bits (160), Expect = 3e-10
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = -1
Query: 332 ISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFSXXXXXX 156
+ G+ GQKLP ++D+ PDI +P + L NA + L + T+++++ LRP+S
Sbjct: 542 LGGVAPSIGQKLPVAHDSLPDIELPLRSLSNAHDDPLKINTAVIDRQSTLRPYS--PPQD 599
Query: 155 XXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNK-PFNQGHNPSLFPSLQQF 3
HKSQ LP L +P Q+ + E NK NQG +P +F +Q+
Sbjct: 600 MLPSAHKSQSLPCLSIPPNQKLVNGQLDISEPNKLLMNQGADPRIFVPEKQY 651
>ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 1000
Score = 54.7 bits (130), Expect = 4e-06
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = -1
Query: 347 QMPVPISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFSX 171
QMPV +T Q+LP +D PDI +P+ RL NA ++ L ++ S H
Sbjct: 553 QMPVAAKEMTSAAVQRLPIPHDYSPDIDLPHHRLSNAHADPLKMDMSTQRPHSSA----- 607
Query: 170 XXXXXXXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNKPFN-QGHNPSLFPSLQQF 3
+HKSQP PLL +P Q+ S + + K QG +P+ F QQ+
Sbjct: 608 ---PVILPSIHKSQPRPLLSIPQTQKPISSSPDVSLATKSIAIQGSHPTRFVPEQQY 661
>ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Musa acuminata subsp. malaccensis]
ref|XP_009399216.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1039
Score = 54.7 bits (130), Expect = 4e-06
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = -1
Query: 347 QMPVPISGITVGNGQKLPSSYDNPPDI-VPYQRLPNAQSNSLNVETSMLEKHLELRPFSX 171
QMPV +T Q+LP +D PDI +P+ RL NA ++ L ++ S H
Sbjct: 592 QMPVAAKEMTSAAVQRLPIPHDYSPDIDLPHHRLSNAHADPLKMDMSTQRPHSSA----- 646
Query: 170 XXXXXXXXPVHKSQPLPLLPVPSYQRQFRSPFSLMESNKPFN-QGHNPSLFPSLQQF 3
+HKSQP PLL +P Q+ S + + K QG +P+ F QQ+
Sbjct: 647 ---PVILPSIHKSQPRPLLSIPQTQKPISSSPDVSLATKSIAIQGSHPTRFVPEQQY 700