BLASTX nr result

ID: Ophiopogon24_contig00024518 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00024518
         (412 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009413918.1| PREDICTED: rRNA-processing protein EFG1 [Mus...    59   2e-07
ref|XP_008788135.1| PREDICTED: rRNA-processing protein efg1 [Pho...    57   6e-07
ref|XP_020095549.1| rRNA-processing protein EFG1-like [Ananas co...    57   1e-06
ref|XP_010936119.1| PREDICTED: rRNA-processing protein efg1 [Ela...    55   6e-06

>ref|XP_009413918.1| PREDICTED: rRNA-processing protein EFG1 [Musa acuminata subsp.
           malaccensis]
          Length = 322

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -2

Query: 339 MAHGGYTKRQIEERRPLGRRSKGLGPDNRKGKKKAKSVS 223
           MAHGGY +R++EERRPLGRRSKGLG D  K +KK+KSVS
Sbjct: 1   MAHGGYARRRLEERRPLGRRSKGLGLD--KKRKKSKSVS 37


>ref|XP_008788135.1| PREDICTED: rRNA-processing protein efg1 [Phoenix dactylifera]
          Length = 322

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 28/39 (71%), Positives = 33/39 (84%)
 Frame = -2

Query: 339 MAHGGYTKRQIEERRPLGRRSKGLGPDNRKGKKKAKSVS 223
           MAHGGY +R++EERRPLGRRSKG+G D  K +KK KSVS
Sbjct: 1   MAHGGYARRRVEERRPLGRRSKGIGYD--KKRKKNKSVS 37


>ref|XP_020095549.1| rRNA-processing protein EFG1-like [Ananas comosus]
 gb|OAY82520.1| rRNA-processing protein efg1 [Ananas comosus]
          Length = 324

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -2

Query: 339 MAHGGYTKRQIEERRPLGRRSKGLGPDNRKGKKK 238
           MAHGGY +R+IEERRPLGRRSKGLG D +KGKK+
Sbjct: 1   MAHGGYARRRIEERRPLGRRSKGLGLD-KKGKKQ 33


>ref|XP_010936119.1| PREDICTED: rRNA-processing protein efg1 [Elaeis guineensis]
          Length = 322

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = -2

Query: 339 MAHGGYTKRQIEERRPLGRRSKGLGPDNRKGKKKAKSVS 223
           MAHGGY +R++EERRPL RRSKG+G D  K +KK KSVS
Sbjct: 1   MAHGGYARRRVEERRPLSRRSKGIGFD--KKRKKHKSVS 37


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