BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00024517
         (850 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo...    51   6e-15
gb|ABA97308.2| retrotransposon protein, putative, Ty1-copia subc...    44   4e-13
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    62   4e-13
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]    55   7e-12
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]         58   9e-12
gb|PKA62818.1| Retrovirus-related Pol polyprotein from transposo...    54   4e-11
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo...    58   6e-11
gb|EMS60458.1| Retrovirus-related Pol polyprotein from transposo...    57   6e-10
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...    57   2e-09
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...    62   2e-09
gb|PKA58053.1| Retrovirus-related Pol polyprotein from transposo...    65   9e-09
gb|PKA57601.1| Retrovirus-related Pol polyprotein from transposo...    65   9e-09
gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposo...    62   1e-08
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]    54   1e-08
gb|KYP53379.1| Retrovirus-related Pol polyprotein from transposo...    54   2e-08
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...    56   2e-08
gb|KYP64816.1| Retrovirus-related Pol polyprotein from transposo...    54   2e-08
gb|KUM46798.1| hypothetical protein ABT39_MTgene6253 (mitochondr...    61   3e-08
gb|KYP65226.1| Retrovirus-related Pol polyprotein from transposo...    54   3e-08
gb|PNX56512.1| hypothetical protein L195_g058242, partial [Trifo...    62   3e-08

>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 365

 Score = 50.8 bits (120), Expect(3) = 6e-15
 Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
 Frame = -1

Query: 175 CVQGEWFSTYTSVEGSLVLKGND-VCQLVAIGNICMKMHDGQE*TLSNIGHVLDLRKNV 2
           C   +WFSTY+  +G  V+ GN+  C+ V IG I +KM DG   TL+ + HV DLRK +
Sbjct: 180 CPFRDWFSTYSIHDGGRVIMGNNSECKSVGIGTIKIKMFDGVIRTLTEVRHVPDLRKGL 238



 Score = 44.7 bits (104), Expect(3) = 6e-15
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
 Frame = -3

Query: 593 SLPSSYDHL-TAIMYEMETFELKDIQ-QILQNELMKREDFTETSELVAKEHKAKSK---- 432
           SLP SYDHL T I+Y  +T +++++   +L NE+  ++   E+  +   + + +SK    
Sbjct: 40  SLPKSYDHLVTTILYGKDTLKVEEVNATLLSNEVRNKQSTGESLTVKTSQDRGRSKNKFG 99

Query: 431 SQEPQKESGASGDETCFRCKK--HFKK 357
           +Q   +      D  C+ CKK  H+K+
Sbjct: 100 NQYRYRSISKENDNRCYYCKKEGHWKR 126



 Score = 33.9 bits (76), Expect(3) = 6e-15
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 354 CHKYKEFMKKFGKNSDGASGK--GDQAGVVEELEDPCNTLTAESRRDVYLDTWLFDTQCS 181
           C K   + +   K S     K  G++A V   LE    TL   S  D   D+W+ D+ CS
Sbjct: 118 CKKEGHWKRDCPKKSKQQQQKKSGEEASVASRLEKDSETLCTFSCMDSS-DSWILDSDCS 176

Query: 180 YHV 172
           YH+
Sbjct: 177 YHM 179


>gb|ABA97308.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 407

 Score = 43.5 bits (101), Expect(4) = 4e-13
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
 Frame = -3

Query: 596 CSLPSSYDH-LTAIMYEMETFELKDI-QQILQNELMKREDFTETSE---LVAKEHKAKSK 432
           CSLP SY+H +T + Y  ET + KDI   +L  + M++    ETS+   L+ KE  A  K
Sbjct: 136 CSLPESYEHVVTTLTYGKETIKTKDITSALLARDQMRKNKEGETSQAEGLLVKEDHAGHK 195

Query: 431 SQEPQKESGASGDETCFRC 375
            ++ +K+        CFRC
Sbjct: 196 VKKNKKKKMVQ----CFRC 210



 Score = 38.9 bits (89), Expect(4) = 4e-13
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -1

Query: 163 EWFSTYTSVEGSLVLKGNDVC-QLVAIGNICMKMHDGQE*TLSNIGHVLDLRKNV 2
           EWFS+Y S E   V  G+D     V +G + +K+ DG E  L  + HV   ++N+
Sbjct: 274 EWFSSYKSGEFGFVYLGDDTSYPAVGVGEVKIKLEDGGEHVLQGVRHVPGQKRNL 328



 Score = 32.7 bits (73), Expect(4) = 4e-13
 Identities = 11/29 (37%), Positives = 24/29 (82%)
 Frame = -2

Query: 732 KQLYGLRIKEGMPILQYLNIFKEIVSDLL 646
           ++LYGL+++EG  +  ++N+F ++V+DL+
Sbjct: 91  QKLYGLKMQEGADLTVHVNVFNQLVTDLV 119



 Score = 27.3 bits (59), Expect(4) = 4e-13
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 258 DPCNTLTAESRRDVYLDTWLFDTQCSYHVS 169
           D C+ LT  S +    + W+ D+  S+HV+
Sbjct: 241 DGCDLLTMSSAQSKDAEAWILDSASSFHVT 270


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score = 62.4 bits (150), Expect(2) = 4e-13
 Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = -2

Query: 822 NVMNEMTV-GFWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSDL 649
           N+++E T  G W +LES+YM+K L+NK ++KKQLY L + EG   L +LN+F  +++ L
Sbjct: 74  NIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQL 132



 Score = 41.2 bits (95), Expect(2) = 4e-13
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
 Frame = -3

Query: 593 SLPSSYDHL-TAIMYEMETFELKDI-QQILQNELMKREDFTETSELVAK-EHKAKSKSQE 423
           SLPSSYD+L T I++   T ELKD+   +L NE M+++   +   L+ +   ++  +S  
Sbjct: 151 SLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSN 210

Query: 422 PQKESGASGD---------ETCFRCKK--HFKK 357
               SGA G            C+ C +  HFK+
Sbjct: 211 NYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKR 243


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score = 55.1 bits (131), Expect(2) = 7e-12
 Identities = 23/54 (42%), Positives = 38/54 (70%)
 Frame = -2

Query: 810 EMTVGFWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSDL 649
           ++T   W KLES++MTK+L N+ ++KK+L+ L++KE M I  + N F + + DL
Sbjct: 33  DITAKLWLKLESLHMTKSLKNRLYLKKRLHTLQMKESMSIKDHFNEFNKTIXDL 86



 Score = 44.3 bits (103), Expect(2) = 7e-12
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
 Frame = -3

Query: 596 CSLPSSYDHLTAI-MYEMETFELKDIQQILQNELMKR-----EDFTETSELVAK-EHKAK 438
           CSLP+SY+H   I MY   T  +KD++  L +  +K+       +     LVA+   + K
Sbjct: 104 CSLPNSYEHFVDIMMYGRGTLFIKDVRVALNSRELKKMVFKSRKYDSGEGLVARGRTRKK 163

Query: 437 SKSQEPQKESGASGDETCFRCKK--HFKK 357
           +  +  +  S + G+  CF+CKK  H+ K
Sbjct: 164 NNGRRGRSRSKSRGNNKCFKCKKEGHYVK 192


>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
          Length = 478

 Score = 57.8 bits (138), Expect(2) = 9e-12
 Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
 Frame = -2

Query: 828 LYNVMNEMTVGF-WCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           +Y+VM E +    W KLE+ +M+K L+NK ++K++LYGL+++EG  +  ++N+F ++V+D
Sbjct: 154 MYHVMEETSPKIIWEKLEAQFMSKTLTNKRYLKQKLYGLKMQEGADLTAHVNVFNQLVTD 213

Query: 651 LLAXXXXXXXXXXXXXXLMFSPIKL*SFDSYNV*NGNLRVERYPADTSK*VDEEGRFYGD 472
           L+               L   P      +SY     ++  +    +TS+    EG     
Sbjct: 214 LVKMDVEVDDEDKAIVLLCSLP------ESYE----HVMRKNKEGETSQ---AEG----- 255

Query: 471 VRISCQGA*GKIEESRTSKGVGCFWR*DLLSMQETL*KNCHKYKEFMKKFGKNSDGASGK 292
           + +    A  K+++++  K V CF R D            H  +E     GK     +  
Sbjct: 256 LLVKEDHAGHKVKKNKKKKMVKCF-RCDEWG---------HIRRECPTLKGKAKANVATS 305

Query: 291 GDQAGVVEELEDPCNTLTAESRRDVYLDTWLFDTQCSYHVS 169
            + +       D C+ LT  S +    + W+ D+  S+HV+
Sbjct: 306 SNDSD-----SDGCDLLTMSSAQSKDAEAWILDSASSFHVT 341



 Score = 41.2 bits (95), Expect(2) = 9e-12
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 163 EWFSTYTSVEGSLVLKGNDVC-QLVAIGNICMKMHDGQE*TLSNIGHVLDLRKNV 2
           EWFS+Y S E   V  G+D     V +G + +K+ DG E  L  + HV  L++N+
Sbjct: 345 EWFSSYKSGEFGFVYLGDDTSYPAVGVGEVKIKLEDGGEHVLQGVRHVPGLKRNL 399


>gb|PKA62818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 163

 Score = 53.5 bits (127), Expect(2) = 4e-11
 Identities = 21/46 (45%), Positives = 38/46 (82%)
 Frame = -2

Query: 786 KLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSDL 649
           K + +YM+K+L+NK +MK+QLY LR+ EG+ +L+++N+F +++S L
Sbjct: 3   KEKKLYMSKSLTNKLYMKRQLYSLRMSEGVNLLKHMNVFCKMISQL 48



 Score = 43.5 bits (101), Expect(2) = 4e-11
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
 Frame = -3

Query: 593 SLPSSYDHL-TAIMYEMETFELKDIQ-QILQNELMKREDFTETSELVAKEHKAKSK---- 432
           SLP SYDHL T I+Y+ +T +++ +   +L NE+  ++   E+  +   + + +SK    
Sbjct: 67  SLPKSYDHLVTTILYDKDTLKVEKVNATLLSNEVRNKQSTCESLTVKISQDRGRSKNKFG 126

Query: 431 SQEPQKESGASGDETCFRCKK--HFKK 357
           +Q   K      D  C  CKK  H+K+
Sbjct: 127 NQYRYKSISKRKDNRCHYCKKESHWKR 153


>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 58.2 bits (139), Expect(2) = 6e-11
 Identities = 24/50 (48%), Positives = 40/50 (80%)
 Frame = -2

Query: 798 GFWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSDL 649
           G W KLES+YMTK+L+NK ++KK+L+ L+++EG  I +++++F + V DL
Sbjct: 82  GIWLKLESLYMTKSLTNKLYLKKRLHQLKMEEGSSIKEHVSLFTKAVLDL 131



 Score = 38.1 bits (87), Expect(2) = 6e-11
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
 Frame = -3

Query: 596 CSLPSSYDHLT-AIMYEMETFELKDIQQILQNELMKREDFTETSE------LVAKEHKAK 438
           CSLPSS+++L   +++  +T  L++++  L +  +K++      E      L+A+    K
Sbjct: 149 CSLPSSFENLVDTMLFGRDTLTLEEVKATLNSRELKKKITENKGEGGDPEALMARGRLEK 208

Query: 437 SKSQEPQK-ESGASGDETCFRCKK--HFKK 357
             S+   K  S    ++ C+ CKK  HF+K
Sbjct: 209 RDSKSKNKRRSKYKNEKACYYCKKEGHFRK 238


>gb|EMS60458.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Triticum urartu]
          Length = 528

 Score = 57.0 bits (136), Expect(2) = 6e-10
 Identities = 25/61 (40%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = -2

Query: 828 LYNVMNEMTVG-FWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           +Y+VM+E +    W KLES +M+K    K ++K++L+G+RI+EG  +++Y+N F ++V+D
Sbjct: 384 IYHVMDENSPKKIWEKLESQFMSKTAMTKVYLKQKLHGMRIQEGSDLVEYMNAFNQVVTD 443

Query: 651 L 649
           L
Sbjct: 444 L 444



 Score = 35.8 bits (81), Expect(2) = 6e-10
 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -3

Query: 596 CSLPSSYDHL-TAIMYEMETFELKDIQQILQNELMKREDFTETS 468
           CSLPSSYDHL T + +  ET + +DI   L +  M++++  E S
Sbjct: 462 CSLPSSYDHLITTLTHGKETIKNEDITAALLSYDMRKKNAVEVS 505


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 424

 Score = 57.4 bits (137), Expect(2) = 2e-09
 Identities = 25/61 (40%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
 Frame = -2

Query: 828 LYNVMNEMTVG-FWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           +Y VM+E T    W KL S+YM+K+L++K ++K+QLYGL+++E   + +++++F ++V D
Sbjct: 73  MYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVD 132

Query: 651 L 649
           L
Sbjct: 133 L 133



 Score = 33.9 bits (76), Expect(2) = 2e-09
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = -3

Query: 596 CSLPSSYDHLTAIM-YEMETFELKDIQQILQNEL--MKREDFTETSELVAKEHKAKSKSQ 426
           CSLP SY+H+  I+ +  +T + + I  +L  +L   K+ +  E S+  +   KAK   +
Sbjct: 151 CSLPPSYEHVVTILTHGKDTIKTEIISSLLARDLRRSKKNEAMEASQAESLLVKAKHDHE 210

Query: 425 EPQKESGASGDETCFRC 375
               +S   G   C++C
Sbjct: 211 AGVSKSKEKG-ARCYKC 226


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 61.6 bits (148), Expect(2) = 2e-09
 Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = -2

Query: 828 LYNVMNEMTVG-FWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           L  V NE T    W KLES+YMTK+L+NK  +K++LY +R+ EG PI  +LN F  I+ D
Sbjct: 73  LREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMD 132

Query: 651 L 649
           L
Sbjct: 133 L 133



 Score = 29.3 bits (64), Expect(2) = 2e-09
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
 Frame = -3

Query: 593 SLPSSYDHLTAIMY--EMETFELKDIQQILQNELMKREDFT------ETSELVAKEHKAK 438
           SLPS+Y H   IM     +T   +D++    + L+ +E F       +  E ++   + +
Sbjct: 152 SLPSTYKHFKEIMLYSNNDTLSFEDVK----SNLLSKEKFDLDIHSEDKGEGLSVRGRTQ 207

Query: 437 SKSQEPQKES-----GASGDETCFRCKK 369
            K     K+S     G   ++TC  CKK
Sbjct: 208 EKGSTSNKKSRSKSRGRKSNKTCRYCKK 235


>gb|PKA58053.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 198

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 29/59 (49%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
 Frame = -2

Query: 828 LYNVMN-EMTVGFWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVS 655
           LYN+ + E +V  W KLE  YM+K+L+NK +MK+QLY LR+ E   +L+++NIF +I+S
Sbjct: 71  LYNIFDVETSVDLWRKLEKFYMSKSLTNKLYMKRQLYSLRMSEEADLLEHMNIFSKIIS 129


>gb|PKA57601.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 249

 Score = 65.5 bits (158), Expect = 9e-09
 Identities = 28/59 (47%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
 Frame = -2

Query: 828 LYNVMN-EMTVGFWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVS 655
           LYN+ + E +V  W KLE  YM+K+L+NK +MK+QLY LR+ EG  +L+++N+F +++S
Sbjct: 126 LYNISDVETSVDLWRKLEKFYMSKSLTNKLYMKRQLYNLRMSEGANLLEHMNVFSKMIS 184


>gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 262

 Score = 61.6 bits (148), Expect(2) = 1e-08
 Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = -2

Query: 828 LYNVMNEMTVG-FWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           L  V NE T    W KLES+YMTK+L+NK  +K++LY +R+ EG PI  +LN F  I+ D
Sbjct: 49  LREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMD 108

Query: 651 L 649
           L
Sbjct: 109 L 109



 Score = 26.9 bits (58), Expect(2) = 1e-08
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
 Frame = -3

Query: 593 SLPSSYDHLTAIMY--EMETFELKDIQQILQNELMKREDF------TETSELVAKEHKAK 438
           SLPS+Y H   IM     +T   +D+    ++ L+ +E F       +  E ++   + +
Sbjct: 128 SLPSTYKHFKEIMLYSNNDTLSFEDV----KSNLLSKEKFDLDIHSEDKGEGLSVRGRTQ 183

Query: 437 SKSQEPQKESGASG-----DETCFRCKK 369
            K     K+S +       ++TC  CKK
Sbjct: 184 EKGSTSNKKSRSKSRRRKTNKTCRYCKK 211


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score = 54.3 bits (129), Expect(2) = 1e-08
 Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = -2

Query: 828 LYNVMNEMT-VGFWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           L  V +E T VG W K ES Y  K+L+N+ + K+QL+ L++ EGM +  +LN F  I+ D
Sbjct: 72  LREVADETTAVGLWRKFESKYQKKSLTNRLYQKRQLHTLKMSEGMQVRDHLNNFNRIILD 131

Query: 651 L 649
           L
Sbjct: 132 L 132



 Score = 33.9 bits (76), Expect(2) = 1e-08
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
 Frame = -3

Query: 596 CSLPSSYDH-LTAIMYEMETFELKDIQQILQN-ELMK-----REDFTETSELVAK----E 450
           CSLPSSY++ +  +MY  ++    D++  LQ+ EL K      E   ET   V++    E
Sbjct: 150 CSLPSSYENFVDTMMYGRBSISXNDVKDALQSKELQKLVSGSEEGSVETGLTVSRGRSME 209

Query: 449 HKAKSKSQEPQKESGASGDETCFRCKK--HFKK 357
                +S+   K   A     CF  K+  HF+K
Sbjct: 210 RNGGGRSKSXSKSKAAM---RCFHXKEKGHFRK 239


>gb|KYP53379.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 307

 Score = 53.5 bits (127), Expect(2) = 2e-08
 Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = -2

Query: 828 LYNVMNEMTV-GFWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           L  V  E T  G W KLES+YMTK+L N+ ++K+ LY   + E  P+ + L+ F +++ D
Sbjct: 72  LRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFNMNENKPVGEQLDQFNKLILD 131

Query: 651 L 649
           L
Sbjct: 132 L 132



 Score = 34.3 bits (77), Expect(2) = 2e-08
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
 Frame = -3

Query: 596 CSLPSSYDHLTAIM-YEMETFELKDIQQILQN-ELMKREDFT------------ETSELV 459
           CSLP +Y H    M +  ++  + ++Q  + + EL +R++              +TS+  
Sbjct: 150 CSLPRAYSHFKETMLFGRDSVSIDEVQAAINSKELNERKEKKPTVNGEGLTAKGKTSKKY 209

Query: 458 AKEHKAKSKSQEPQKESGASGDET-CFRCKK--HFKKI 354
           +K  K K KS E QK+ G S     C+ CKK  H +K+
Sbjct: 210 SKPDKKKPKS-EKQKDGGESTFTIRCYHCKKEGHTRKV 246


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 425

 Score = 55.8 bits (133), Expect(2) = 2e-08
 Identities = 25/61 (40%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
 Frame = -2

Query: 828 LYNVMNEMTVG-FWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           +Y VM+E T    W KL S+YM+K+L++K ++K+QLYGL+++E   + +++++F ++V D
Sbjct: 73  MYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVD 132

Query: 651 L 649
           L
Sbjct: 133 L 133



 Score = 31.6 bits (70), Expect(2) = 2e-08
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
 Frame = -3

Query: 596 CSLPSSYDH-LTAIMYEMETFELKD-IQQILQNELMK--REDFTETSELVAKEHKAKSKS 429
           CSLP SY+H +T +M+  +T + ++ I  +L  +L +  + +  E S+  +   KAK   
Sbjct: 151 CSLPPSYEHVVTTLMHGKDTVKTEEKISSLLARDLRRSNKNEAMEASQAESLLVKAKHDH 210

Query: 428 QEPQKESGASGDETCFRC 375
           +    +S   G   C++C
Sbjct: 211 EAGVSKSKDKG-ARCYKC 227


>gb|KYP64816.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 252

 Score = 53.9 bits (128), Expect(2) = 2e-08
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = -2

Query: 828 LYNVMNEMTV-GFWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           L  V  E T  G W KLES+YMTK+L N+ ++K+ LY  ++ E  P+ + L+ F +++ D
Sbjct: 72  LRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFKMNEDKPVGEQLDHFNKLILD 131

Query: 651 L 649
           L
Sbjct: 132 L 132



 Score = 33.5 bits (75), Expect(2) = 2e-08
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
 Frame = -3

Query: 596 CSLPSSYDHLTAIM-YEMETFELKDIQQILQN-ELMKREDFT------------ETSELV 459
           CSLP +Y H    M +  ++  + ++Q  + + EL +R++              +TS+  
Sbjct: 150 CSLPRAYSHFKETMLFGRDSVSIDEVQAAINSKELNERKEKKPTVNGEGLTAKGKTSKKY 209

Query: 458 AKEHKAKSKSQEPQKESGASGDET-CFRCKK--HFKKI 354
           +K  K K KS E QK+ G S     C+ CKK  H +K+
Sbjct: 210 SKLDKKKPKS-EKQKDGGESTFTIRCYHCKKEGHTRKV 246


>gb|KUM46798.1| hypothetical protein ABT39_MTgene6253 (mitochondrion) [Picea
           glauca]
          Length = 116

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = -2

Query: 828 LYNVMNEMTV-GFWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           ++NV  E T  G W KLES+Y +K+L N+  +K +LY L++KEG  + ++LN F +I+S 
Sbjct: 26  IFNVRGEKTASGLWAKLESLYQSKSLLNRILLKNRLYSLKMKEGAKVSEHLNTFNDILSQ 85

Query: 651 L 649
           L
Sbjct: 86  L 86


>gb|KYP65226.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 689

 Score = 53.9 bits (128), Expect(2) = 3e-08
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = -2

Query: 828 LYNVMNEMTV-GFWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQYLNIFKEIVSD 652
           L  V  E T  G W KLES+YMTK+L N+ ++K+ LY  ++ E  P+ + L+ F +++ D
Sbjct: 49  LRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFKMNEDKPVGEQLDQFNKLILD 108

Query: 651 L 649
           L
Sbjct: 109 L 109



 Score = 33.1 bits (74), Expect(2) = 3e-08
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 16/97 (16%)
 Frame = -3

Query: 596 CSLPSSYDHLTAIM-YEMETFELKDIQQILQ----NELMKREDFTETSELVAKEHKAKSK 432
           CSLP +Y H    M +  ++  + ++Q  +     NE  +++       L AK   +K  
Sbjct: 127 CSLPRAYSHFKETMLFGRDSVSIDEVQAAINSKELNERKEKKPTVNGEGLTAKGKTSKKY 186

Query: 431 SQ----EPQKESGASGDET-----CFRCKK--HFKKI 354
           S+    +P+ E    G E+     C+ CKK  H +K+
Sbjct: 187 SKPDKKKPKPEKQKDGGESTFTIRCYHCKKEGHTRKV 223


>gb|PNX56512.1| hypothetical protein L195_g058242, partial [Trifolium pratense]
          Length = 145

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = -1

Query: 175 CVQGEWFSTYTSVEGSLVLKGND-VCQLVAIGNICMKMHDGQE*TLSNIGHVLDLRKNV 2
           C   +WF+TY S++G +VL GN+  C+++  G I +KMHDG   TL N+ HV +LRKN+
Sbjct: 63  CPNRKWFTTYESIDGGIVLMGNNHACKIMGYGTIRIKMHDGAVRTLMNVRHVPNLRKNL 121