BLASTX nr result
ID: Ophiopogon24_contig00024507
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00024507
(353 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020247457.1| multiple RNA-binding domain-containing prote... 125 6e-31
gb|ONK55952.1| uncharacterized protein A4U43_C10F2630 [Asparagus... 87 2e-17
ref|XP_008812571.1| PREDICTED: multiple RNA-binding domain-conta... 67 2e-10
ref|XP_019704116.1| PREDICTED: multiple RNA-binding domain-conta... 65 1e-09
ref|XP_010914288.1| PREDICTED: multiple RNA-binding domain-conta... 65 1e-09
ref|XP_009380919.1| PREDICTED: multiple RNA-binding domain-conta... 63 4e-09
ref|XP_020673203.1| multiple RNA-binding domain-containing prote... 59 1e-07
gb|PKU77317.1| Polyadenylate-binding protein 2 [Dendrobium caten... 59 1e-07
gb|KQK98866.1| hypothetical protein SETIT_009329mg [Setaria ital... 57 6e-07
ref|XP_004976774.1| multiple RNA-binding domain-containing prote... 57 6e-07
gb|PKA62790.1| Polyadenylate-binding protein 2 [Apostasia shenzh... 55 2e-06
ref|XP_002448509.2| multiple RNA-binding domain-containing prote... 55 4e-06
ref|XP_020583762.1| multiple RNA-binding domain-containing prote... 54 7e-06
ref|XP_020583761.1| multiple RNA-binding domain-containing prote... 54 7e-06
gb|AQK46049.1| nucleotide binding [Zea mays] >gi|1142651064|gb|A... 54 9e-06
gb|AQK46047.1| nucleotide binding [Zea mays] 54 9e-06
ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea ma... 54 1e-05
ref|XP_008661819.1| uncharacterized protein LOC100279860 isoform... 54 1e-05
>ref|XP_020247457.1| multiple RNA-binding domain-containing protein 1 [Asparagus
officinalis]
Length = 899
Score = 125 bits (314), Expect = 6e-31
Identities = 67/110 (60%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
Frame = -1
Query: 353 EAHLSVSTKKQS--NKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIK 180
E LS S KKQS EF + SS PALKGCSETN IKQ++E V + DISDMDYFKSR+K
Sbjct: 237 EGRLSKSKKKQSINENEFPQETSSSPALKGCSETNLIKQADETVRDDDISDMDYFKSRVK 296
Query: 179 KNWSDSETDDEGSHGERIGSIKSKIAELESKDHTVETGEAQTHGGIDHDE 30
K WSDSETDDEG + KS+ ELES+ + + EAQTHGGI+HDE
Sbjct: 297 KEWSDSETDDEG-----LAGTKSQDTELESEANPSKMEEAQTHGGINHDE 341
>gb|ONK55952.1| uncharacterized protein A4U43_C10F2630 [Asparagus officinalis]
Length = 892
Score = 86.7 bits (213), Expect = 2e-17
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -1
Query: 239 NENVHEGDISDMDYFKSRIKKNWSDSETDDEGSHGERIGSIKSKIAELESKDHTVETGEA 60
NE V + DISDMDYFKSR+KK WSDSETDDEG + KS+ ELES+ + + EA
Sbjct: 243 NETVRDDDISDMDYFKSRVKKEWSDSETDDEG-----LAGTKSQDTELESEANPSKMEEA 297
Query: 59 QTHGGIDHDE 30
QTHGGI+HDE
Sbjct: 298 QTHGGINHDE 307
>ref|XP_008812571.1| PREDICTED: multiple RNA-binding domain-containing protein 1
[Phoenix dactylifera]
Length = 615
Score = 67.0 bits (162), Expect = 2e-10
Identities = 50/125 (40%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Frame = -1
Query: 350 AHLSVSTKKQSNKE--FANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKK 177
A L V SN E A+ SS KG SET+ +QSNE ++DMDYFKSRIKK
Sbjct: 189 AKLKVQVIDGSNGENGVAHGTSSVHIQKGASETST-EQSNEIAQYDVMTDMDYFKSRIKK 247
Query: 176 NWSDSETDDEGSHGERIGSIKSKI----------AELESKDHTVETGEAQTHGGIDHDEM 27
NWSDSETD+E S E +S+ E+++K TV+T + T G + E+
Sbjct: 248 NWSDSETDNEDSRSEEDSKCESESESDDVKSFEPREVDAKGRTVQT-DGSTPAGHNQVEV 306
Query: 26 KLKPS 12
+ + S
Sbjct: 307 ENETS 311
>ref|XP_019704116.1| PREDICTED: multiple RNA-binding domain-containing protein 1 isoform
X2 [Elaeis guineensis]
Length = 812
Score = 64.7 bits (156), Expect = 1e-09
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Frame = -1
Query: 350 AHLSVSTKKQSNKE--FANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKK 177
A + V SN E A+ SS KG SE + +QSNE ++DM+YFKSRIKK
Sbjct: 123 AKMKVQVIDGSNGENGVAHGTSSVHIQKGASEMST-EQSNEIAQSDVMTDMEYFKSRIKK 181
Query: 176 NWSDSETDDEGSHGERIGSIKS----------KIAELESKDHTVETGEAQTHGGIDHDEM 27
NWSDSETD+E S + +S + E+++K HTV+T + T G E+
Sbjct: 182 NWSDSETDNEDSRSDEDSKSESDSESDDEKLFEPREVDAKGHTVQT-DGSTPAGDSQVEV 240
Query: 26 KLKPSFK 6
+ + S +
Sbjct: 241 EKETSLE 247
>ref|XP_010914288.1| PREDICTED: multiple RNA-binding domain-containing protein 1 isoform
X1 [Elaeis guineensis]
Length = 878
Score = 64.7 bits (156), Expect = 1e-09
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Frame = -1
Query: 350 AHLSVSTKKQSNKE--FANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKK 177
A + V SN E A+ SS KG SE + +QSNE ++DM+YFKSRIKK
Sbjct: 189 AKMKVQVIDGSNGENGVAHGTSSVHIQKGASEMST-EQSNEIAQSDVMTDMEYFKSRIKK 247
Query: 176 NWSDSETDDEGSHGERIGSIKS----------KIAELESKDHTVETGEAQTHGGIDHDEM 27
NWSDSETD+E S + +S + E+++K HTV+T + T G E+
Sbjct: 248 NWSDSETDNEDSRSDEDSKSESDSESDDEKLFEPREVDAKGHTVQT-DGSTPAGDSQVEV 306
Query: 26 KLKPSFK 6
+ + S +
Sbjct: 307 EKETSLE 313
>ref|XP_009380919.1| PREDICTED: multiple RNA-binding domain-containing protein 1 [Musa
acuminata subsp. malaccensis]
Length = 859
Score = 63.2 bits (152), Expect = 4e-09
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = -1
Query: 323 QSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSETDDEG 144
+ E A+ SS P SE PI+Q N E +DM+YFKSR+KKNWSDSETDD
Sbjct: 201 KGENETAHGTSSSPTQIESSEIIPIEQFNG---EDATTDMEYFKSRVKKNWSDSETDDNN 257
Query: 143 SHGERIGSIKSKIAELESKDHTVE 72
+ S+ S++ E ++KD T++
Sbjct: 258 LEKDEKESL-SELLETDAKDKTID 280
>ref|XP_020673203.1| multiple RNA-binding domain-containing protein 1 [Dendrobium
catenatum]
ref|XP_020673204.1| multiple RNA-binding domain-containing protein 1 [Dendrobium
catenatum]
Length = 863
Score = 58.9 bits (141), Expect = 1e-07
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = -1
Query: 311 EFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSET----DDEG 144
+ A+K+S +KG S+ +P +S + + ISDMDY KSRIKKNWSDSE D++G
Sbjct: 195 DLADKSSPRSLIKG-SKKSPTDKSPQVAKDDVISDMDYLKSRIKKNWSDSEADGSFDEDG 253
Query: 143 SHGERIGSIKSKIAELESKDHTVETGEAQTH 51
HG G + ++ KD V+ ++ H
Sbjct: 254 DHGSGNGH-NDDNSHMDVKDQIVKYEDSHEH 283
>gb|PKU77317.1| Polyadenylate-binding protein 2 [Dendrobium catenatum]
Length = 882
Score = 58.9 bits (141), Expect = 1e-07
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = -1
Query: 311 EFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSET----DDEG 144
+ A+K+S +KG S+ +P +S + + ISDMDY KSRIKKNWSDSE D++G
Sbjct: 216 DLADKSSPRSLIKG-SKKSPTDKSPQVAKDDVISDMDYLKSRIKKNWSDSEADGSFDEDG 274
Query: 143 SHGERIGSIKSKIAELESKDHTVETGEAQTH 51
HG G + ++ KD V+ ++ H
Sbjct: 275 DHGSGNGH-NDDNSHMDVKDQIVKYEDSHEH 304
>gb|KQK98866.1| hypothetical protein SETIT_009329mg [Setaria italica]
Length = 881
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = -1
Query: 335 STKKQSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSET 156
S++ S++E N SS AL+ +Q + + D++D D+FKS+IKKNWSDSE+
Sbjct: 193 SSEDSSDEEMTNDPSSEDALE--------EQQTGSKQDNDMTDADFFKSKIKKNWSDSES 244
Query: 155 DDEGSHGERIGSIKSKIAELESKD 84
DDE S S + + ES+D
Sbjct: 245 DDEDSGDHSNSSTDDENSSDESQD 268
>ref|XP_004976774.1| multiple RNA-binding domain-containing protein 1 [Setaria italica]
Length = 883
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = -1
Query: 335 STKKQSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSET 156
S++ S++E N SS AL+ +Q + + D++D D+FKS+IKKNWSDSE+
Sbjct: 193 SSEDSSDEEMTNDPSSEDALE--------EQQTGSKQDNDMTDADFFKSKIKKNWSDSES 244
Query: 155 DDEGSHGERIGSIKSKIAELESKD 84
DDE S S + + ES+D
Sbjct: 245 DDEDSGDHSNSSTDDENSSDESQD 268
>gb|PKA62790.1| Polyadenylate-binding protein 2 [Apostasia shenzhenica]
Length = 862
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/69 (46%), Positives = 38/69 (55%)
Frame = -1
Query: 353 EAHLSVSTKKQSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKN 174
EAH +S + E + + S P K S K S +G ISDMDYFKSR+KKN
Sbjct: 186 EAHAQLSDESSKKSELIDASFSVPLSKE-SSIAMTKLSANVAKDGVISDMDYFKSRVKKN 244
Query: 173 WSDSETDDE 147
W DSET DE
Sbjct: 245 WLDSETYDE 253
>ref|XP_002448509.2| multiple RNA-binding domain-containing protein 1 [Sorghum bicolor]
gb|EES11404.2| hypothetical protein SORBI_3006G211100 [Sorghum bicolor]
Length = 882
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = -1
Query: 335 STKKQSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSET 156
S++ S++E AN +SS A + + EN +++D D+FKS++KKNWSDSE+
Sbjct: 194 SSEDASDEEMANDSSSENASE--------ELQTENKQTKNMTDADFFKSKVKKNWSDSES 245
Query: 155 DDEGSHGERIGSIKSKIAELESKD 84
DDEGS + + + ES+D
Sbjct: 246 DDEGSGDQSNTTTDDEDMSDESED 269
>ref|XP_020583762.1| multiple RNA-binding domain-containing protein 1 isoform X2
[Phalaenopsis equestris]
Length = 793
Score = 53.9 bits (128), Expect = 7e-06
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Frame = -1
Query: 338 VSTKKQSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSE 159
+ T+ + A+K+ ++G ++ K SN ++ ISDMDY KSRIKKNWSDSE
Sbjct: 188 LQTRLSDEFDLADKSFPRTLIQGSMKSMKNK-SNGVANDDIISDMDYLKSRIKKNWSDSE 246
Query: 158 TD----DEGSHGERIGSIKSKIAELESKDHTVETGEAQTH 51
TD ++G G+ + ++ K + + +AQ H
Sbjct: 247 TDVECFEDGDRGDE-DDHNDDNSRMDGKSQIINSEDAQEH 285
>ref|XP_020583761.1| multiple RNA-binding domain-containing protein 1 isoform X1
[Phalaenopsis equestris]
Length = 865
Score = 53.9 bits (128), Expect = 7e-06
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Frame = -1
Query: 338 VSTKKQSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSE 159
+ T+ + A+K+ ++G ++ K SN ++ ISDMDY KSRIKKNWSDSE
Sbjct: 188 LQTRLSDEFDLADKSFPRTLIQGSMKSMKNK-SNGVANDDIISDMDYLKSRIKKNWSDSE 246
Query: 158 TD----DEGSHGERIGSIKSKIAELESKDHTVETGEAQTH 51
TD ++G G+ + ++ K + + +AQ H
Sbjct: 247 TDVECFEDGDRGDE-DDHNDDNSRMDGKSQIINSEDAQEH 285
>gb|AQK46049.1| nucleotide binding [Zea mays]
gb|AQK46050.1| nucleotide binding [Zea mays]
Length = 599
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = -1
Query: 335 STKKQSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSET 156
S++ S+++ AN SS A + + EN + +++D D+FKS++KKNWSDSE+
Sbjct: 193 SSEDTSDEKVANDLSSENASE--------QLKTENKQDKNMTDADFFKSKVKKNWSDSES 244
Query: 155 DDEGSHGERIGSIKSKIAELESKD 84
DDEGS + + + + ES+D
Sbjct: 245 DDEGSAHQSNTTTDDEDSSDESQD 268
>gb|AQK46047.1| nucleotide binding [Zea mays]
Length = 842
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = -1
Query: 335 STKKQSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSET 156
S++ S+++ AN SS A + + EN + +++D D+FKS++KKNWSDSE+
Sbjct: 193 SSEDTSDEKVANDLSSENASE--------QLKTENKQDKNMTDADFFKSKVKKNWSDSES 244
Query: 155 DDEGSHGERIGSIKSKIAELESKD 84
DDEGS + + + + ES+D
Sbjct: 245 DDEGSAHQSNTTTDDEDSSDESQD 268
>ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea mays]
gb|ACL53628.1| unknown [Zea mays]
gb|AQK46048.1| nucleotide binding [Zea mays]
Length = 881
Score = 53.5 bits (127), Expect = 1e-05
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = -1
Query: 335 STKKQSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSET 156
S++ S+++ AN SS A + + EN + +++D D+FKS++KKNWSDSE+
Sbjct: 193 SSEDTSDEKVANDLSSENASE--------QLKTENKQDKNMTDADFFKSKVKKNWSDSES 244
Query: 155 DDEGSHGERIGSIKSKIAELESKD 84
DDEGS + + + + ES+D
Sbjct: 245 DDEGSAHQSNTTTDDEDSSDESQD 268
>ref|XP_008661819.1| uncharacterized protein LOC100279860 isoform X1 [Zea mays]
Length = 886
Score = 53.5 bits (127), Expect = 1e-05
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = -1
Query: 335 STKKQSNKEFANKASSGPALKGCSETNPIKQSNENVHEGDISDMDYFKSRIKKNWSDSET 156
S++ S+++ AN SS A + + EN + +++D D+FKS++KKNWSDSE+
Sbjct: 193 SSEDTSDEKVANDLSSENASE--------QLKTENKQDKNMTDADFFKSKVKKNWSDSES 244
Query: 155 DDEGSHGERIGSIKSKIAELESKD 84
DDEGS + + + + ES+D
Sbjct: 245 DDEGSAHQSNTTTDDEDSSDESQD 268