BLASTX nr result
ID: Ophiopogon24_contig00024286
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00024286
(451 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020246243.1| threonylcarbamoyladenosine tRNA methylthiotr... 106 7e-38
ref|XP_008807670.1| PREDICTED: threonylcarbamoyladenosine tRNA m... 61 8e-19
ref|XP_010912525.1| PREDICTED: threonylcarbamoyladenosine tRNA m... 69 4e-18
ref|XP_008781560.2| PREDICTED: uncharacterized protein LOC103701... 56 1e-15
ref|XP_009416924.1| PREDICTED: threonylcarbamoyladenosine tRNA m... 59 1e-14
ref|XP_010244836.1| PREDICTED: threonylcarbamoyladenosine tRNA m... 50 8e-09
ref|XP_019051717.1| PREDICTED: threonylcarbamoyladenosine tRNA m... 50 8e-09
gb|KMZ59702.1| (Dimethylallyl)adenosine tRNA methylthiotransfera... 45 3e-08
gb|OVA11473.1| TRAM domain [Macleaya cordata] 58 6e-07
>ref|XP_020246243.1| threonylcarbamoyladenosine tRNA methylthiotransferase [Asparagus
officinalis]
Length = 620
Score = 106 bits (264), Expect(2) = 7e-38
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = -3
Query: 245 NEAPTDAIIMDSSKTGNWRSRTLVNSIQSLLLRKRIQRPVKTSNEHEMQSVDTHERRTRG 66
NEAP ++IIMDSS+ GN RSR+LVNSIQSL+LRKR Q K SNE EM+S+D E RTRG
Sbjct: 533 NEAP-ESIIMDSSRNGNSRSRSLVNSIQSLVLRKRTQESEKKSNEDEMRSIDKQE-RTRG 590
Query: 65 RLATLDWILIAGMFGSFIMIV 3
RL+TLDWILIAGMF SF++IV
Sbjct: 591 RLSTLDWILIAGMFTSFMVIV 611
Score = 79.0 bits (193), Expect(2) = 7e-38
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = -2
Query: 447 DVKITSVGRWSVFGEVIGSPEPVKENTFQRNTAAETTPAPGSCIDCTCSREPEP 286
+ +ITSV RWSVFGEVIG+PEPV NT + N+ ET+P SC DCTCS++PEP
Sbjct: 463 NARITSVARWSVFGEVIGNPEPVNINTSKSNSMTETSPVSYSCTDCTCSKDPEP 516
>ref|XP_008807670.1| PREDICTED: threonylcarbamoyladenosine tRNA
methylthiotransferase-like [Phoenix dactylifera]
Length = 617
Score = 60.8 bits (146), Expect(2) = 8e-19
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -2
Query: 450 TDVKITSVGRWSVFGEVIGSPE-PVKENTFQRNTAAETTPAPGSCIDCTCSREPEP 286
TDVKITSVGRWS+FGEVI +P VKENT+Q N E P P S ++PEP
Sbjct: 455 TDVKITSVGRWSIFGEVIETPSAQVKENTYQGNITLEAFPCPSS-----SDKDPEP 505
Score = 60.5 bits (145), Expect(2) = 8e-19
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = -3
Query: 245 NEAPTDAIIMDSSKTGNWRSRTLVNSIQSLLLRKRIQRPVKTSNEHEMQSV--DTHERRT 72
+EAP AI+++SS T N R ++S+QS+LLRKR Q+ N+ + + RR
Sbjct: 523 DEAPV-AIVINSSTTRNHIGRNFISSLQSMLLRKRRQQGSMRMNDVDANKFLENQETRRM 581
Query: 71 RGRLATLDWILIAGMFGSFIMIV 3
G+LAT+DWIL++GM SF+ +
Sbjct: 582 SGKLATMDWILLSGMIVSFLTTI 604
>ref|XP_010912525.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase
[Elaeis guineensis]
Length = 617
Score = 68.6 bits (166), Expect(2) = 4e-18
Identities = 36/56 (64%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = -2
Query: 450 TDVKITSVGRWSVFGEVIGSPE-PVKENTFQRNTAAETTPAPGSCIDCTCSREPEP 286
TDVKITSVGRWSVFGEVI +P VKENT+Q N E P PGS C +EPEP
Sbjct: 455 TDVKITSVGRWSVFGEVIETPSAQVKENTYQGNITLEAFPCPGS-----CDKEPEP 505
Score = 50.4 bits (119), Expect(2) = 4e-18
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = -3
Query: 245 NEAPTDAIIMDSSKTGNWRSRTLVNSIQSLLLRKRIQRPVKTSNEHEMQSVDTHE--RRT 72
+E+P AI+++SS T R ++S+QS+LL+KR Q+ N+ + RR
Sbjct: 523 DESPV-AIVINSSTTRIQVGRNFISSVQSVLLKKRRQQGSMRMNDVNANKFPENRETRRM 581
Query: 71 RGRLATLDWILIAGMFGSFIMIV 3
+L+T+DWIL+ GM SF+ V
Sbjct: 582 SAKLSTMDWILLGGMIVSFLTTV 604
>ref|XP_008781560.2| PREDICTED: uncharacterized protein LOC103701320 [Phoenix
dactylifera]
Length = 193
Score = 56.2 bits (134), Expect(2) = 1e-15
Identities = 32/56 (57%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = -2
Query: 450 TDVKITSVGRWSVFGEVIGSPEPVKENTFQRNTAAETTPA-PGSCIDCTCSREPEP 286
TDVKITSVGRWSVFGEVI E N E P SC C CSREPEP
Sbjct: 33 TDVKITSVGRWSVFGEVI-------ETHSSGNINLEAAPCQEDSCESCACSREPEP 81
Score = 54.3 bits (129), Expect(2) = 1e-15
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = -3
Query: 248 GNEAPTDAIIMDSSKTGNWRSRTLVNSIQSLLLRKR-IQRPVKTSNEHEMQSVDTHER-R 75
G+E A++M+SS T T ++++QS+ LRKR +Q PVK ++ + + + + R
Sbjct: 97 GHEETPIAMVMNSSTTRYHIGGTFISALQSMQLRKRKLQGPVKMNDVNANKFQENQKTSR 156
Query: 74 TRGRLATLDWILIAGMFGSFIMIV 3
G+LAT+DWIL++GM SF+ +
Sbjct: 157 MSGKLATMDWILLSGMIVSFLTTI 180
>ref|XP_009416924.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase
[Musa acuminata subsp. malaccensis]
Length = 616
Score = 58.5 bits (140), Expect(2) = 1e-14
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = -2
Query: 441 KITSVGRWSVFGEVIGSPEPVKENTFQRNTAAETTPAPGSCIDCTCSREPEP 286
KITSVGRWS FGEVI +P V + T N ++ SC C CSR+PEP
Sbjct: 459 KITSVGRWSAFGEVIDTPAMVNKGTHPENPKVGSSLHSNSCNSCECSRDPEP 510
Score = 48.9 bits (115), Expect(2) = 1e-14
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = -3
Query: 224 IIMDSSKTGNWRSRTLVNSIQSLLLRKRIQRPVKTSNEHEMQSVDTHERR-TRGRLATLD 48
I+MD + TG R + SIQSLL+RKR P K S + +S + H+ TR +L +D
Sbjct: 534 IVMDRNHTG----RNFIGSIQSLLVRKRSCGPEKKSEGNTFKSSNDHQTEGTRRKLVAVD 589
Query: 47 WILIAGMFGSFIMIV 3
++L++GM SF+ V
Sbjct: 590 YMLLSGMALSFLTSV 604
>ref|XP_010244836.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase
isoform X1 [Nelumbo nucifera]
ref|XP_010244837.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase
isoform X1 [Nelumbo nucifera]
Length = 627
Score = 49.7 bits (117), Expect(2) = 8e-09
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -2
Query: 450 TDVKITSVGRWSVFGEVIGSPEPVKENTFQ--RNTAAETTPAPGSCIDCTCSREPEP 286
T+VKITS+GRWSVFGEVI + + + + TF ++T + C CS +PEP
Sbjct: 467 TNVKITSIGRWSVFGEVIDTLDQIPDTTFSGIKSTVDKFHLCSDLYETCACSGQPEP 523
Score = 37.7 bits (86), Expect(2) = 8e-09
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 173 NSIQSLLLRKRIQRPVKTSNEHEMQSVDTHERRTR-GRLATLDWILIAGMFGSFIMIV 3
N I L R+++QRP N H ++ ++ R R G L +DW L+ G+ SF I+
Sbjct: 556 NPIGWLCRRRKVQRPECMVNGHAVKPIEKQVMRKRLGELGVIDWALLFGILVSFFTIL 613
>ref|XP_019051717.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase
isoform X2 [Nelumbo nucifera]
Length = 521
Score = 49.7 bits (117), Expect(2) = 8e-09
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -2
Query: 450 TDVKITSVGRWSVFGEVIGSPEPVKENTFQ--RNTAAETTPAPGSCIDCTCSREPEP 286
T+VKITS+GRWSVFGEVI + + + + TF ++T + C CS +PEP
Sbjct: 361 TNVKITSIGRWSVFGEVIDTLDQIPDTTFSGIKSTVDKFHLCSDLYETCACSGQPEP 417
Score = 37.7 bits (86), Expect(2) = 8e-09
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 173 NSIQSLLLRKRIQRPVKTSNEHEMQSVDTHERRTR-GRLATLDWILIAGMFGSFIMIV 3
N I L R+++QRP N H ++ ++ R R G L +DW L+ G+ SF I+
Sbjct: 450 NPIGWLCRRRKVQRPECMVNGHAVKPIEKQVMRKRLGELGVIDWALLFGILVSFFTIL 507
>gb|KMZ59702.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Zostera
marina]
Length = 617
Score = 45.4 bits (106), Expect(2) = 3e-08
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 NWRSRTLVNSIQSLLLRKR-IQRPVKTSNEHEMQSVDTHERRTRGRLATLDWILIAGMFG 21
N +S LV+S+++L LR+R Q+ + H + +R + A LDW+LI G+
Sbjct: 540 NTKSGNLVSSLKTLFLRRRKTQQDSDSDKSHSTTKMKVMDRNLLSKYAVLDWVLIFGIIS 599
Query: 20 SFIMIV 3
SF++IV
Sbjct: 600 SFLIIV 605
Score = 40.0 bits (92), Expect(2) = 3e-08
Identities = 27/67 (40%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
Frame = -2
Query: 450 TDVKITSVGRWSVFGEVIGSP---------EPVKENTFQRNTAAETTPAPG--SCID-CT 307
T VKITSVGRWSVFGE+I P V + P+ C D C
Sbjct: 460 TTVKITSVGRWSVFGELISIPTTNPKEHKISNVSTTSHHEQPIQSNVPSANIVCCGDLCE 519
Query: 306 CSREPEP 286
CS E EP
Sbjct: 520 CSAEVEP 526
>gb|OVA11473.1| TRAM domain [Macleaya cordata]
Length = 635
Score = 58.2 bits (139), Expect = 6e-07
Identities = 31/70 (44%), Positives = 37/70 (52%), Gaps = 15/70 (21%)
Frame = -2
Query: 450 TDVKITSVGRWSVFGEVIGSPEPVKENTF--------QRNTAAETTPAPGSCI------- 316
TDVKITSVGRWSVFGE+I +P +KE T ++ P C+
Sbjct: 465 TDVKITSVGRWSVFGEMIETPSDMKEKTISHERKPIPDKSLPCSDKSIPNKCLPCSDMDE 524
Query: 315 DCTCSREPEP 286
C CSREPEP
Sbjct: 525 SCACSREPEP 534