BLASTX nr result

ID: Ophiopogon24_contig00024259 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00024259
         (675 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019707304.1| PREDICTED: uncharacterized protein LOC105049...    59   1e-07
ref|XP_010926950.1| PREDICTED: uncharacterized protein LOC105049...    59   2e-07
ref|XP_008799092.1| PREDICTED: uncharacterized protein LOC103713...    58   4e-07

>ref|XP_019707304.1| PREDICTED: uncharacterized protein LOC105049093 isoform X2 [Elaeis
           guineensis]
          Length = 148

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
 Frame = -1

Query: 525 MHEDDTTAIPPAMAAFFGGNRA---PVAKNSSTVPKWRL--PAPELRREGKGTGRTIILV 361
           +++ D     P MAAFF G      P A+N++  P WR+  P P+ R  G+   R  +LV
Sbjct: 38  VYQTDPGPPSPEMAAFFHGRPTVALPEARNATDWP-WRVAPPGPD-RSAGRKRARVALLV 95

Query: 360 TGIVCGAVGIGLLVTAMMAFATNIRESRP-----------------EVRLGA 256
            G+VCG VG+ LL  A +A+  + R SRP                 EVRLGA
Sbjct: 96  AGVVCGVVGVALLAAAAVAYVVHARRSRPGGGPGSGFGVGRRRSSPEVRLGA 147


>ref|XP_010926950.1| PREDICTED: uncharacterized protein LOC105049093 isoform X1 [Elaeis
           guineensis]
          Length = 173

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
 Frame = -1

Query: 525 MHEDDTTAIPPAMAAFFGGNRA---PVAKNSSTVPKWRL--PAPELRREGKGTGRTIILV 361
           +++ D     P MAAFF G      P A+N++  P WR+  P P+ R  G+   R  +LV
Sbjct: 63  VYQTDPGPPSPEMAAFFHGRPTVALPEARNATDWP-WRVAPPGPD-RSAGRKRARVALLV 120

Query: 360 TGIVCGAVGIGLLVTAMMAFATNIRESRP-----------------EVRLGA 256
            G+VCG VG+ LL  A +A+  + R SRP                 EVRLGA
Sbjct: 121 AGVVCGVVGVALLAAAAVAYVVHARRSRPGGGPGSGFGVGRRRSSPEVRLGA 172


>ref|XP_008799092.1| PREDICTED: uncharacterized protein LOC103713832 [Phoenix
           dactylifera]
          Length = 153

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
 Frame = -1

Query: 540 ELSPGMH----EDDTTAIPPAMAAFFGGNRA---PVAKNSSTVPKWRL--PAPELRREGK 388
           ++ P  H    + D     PAMAAFF G      P A+N+ T   WR+  P P+ R  G+
Sbjct: 34  DIRPSEHGLEDQKDPGPTSPAMAAFFQGRPTVALPEARNA-TDETWRVAPPGPD-RSAGR 91

Query: 387 GTGRTIILVTGIVCGAVGIGLLVTAMMAFATNIRESRP 274
              R  +LV G+VCG VG  LL  A +A+  + R SRP
Sbjct: 92  KRARVALLVAGVVCGVVGAALLAAAAVAYVVHARRSRP 129


Top