BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00024251
         (3108 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264489.1| LOW QUALITY PROTEIN: probable RNA-dependent ...  1585   0.0  
gb|ONK69464.1| uncharacterized protein A4U43_C05F23220 [Asparagu...  1585   0.0  
ref|XP_019703492.1| PREDICTED: probable RNA-dependent RNA polyme...  1276   0.0  
ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polyme...  1275   0.0  
ref|XP_020110295.1| probable RNA-dependent RNA polymerase 2 [Ana...  1252   0.0  
ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polyme...  1206   0.0  
gb|OAY66642.1| putative RNA-dependent RNA polymerase 2 [Ananas c...  1199   0.0  
gb|PKA52670.1| putative RNA-dependent RNA polymerase 2 [Apostasi...  1164   0.0  
gb|OVA03721.1| RNA recognition motif domain [Macleaya cordata]       1162   0.0  
ref|XP_020701436.1| probable RNA-dependent RNA polymerase 2 [Den...  1144   0.0  
ref|XP_007211312.1| RNA-dependent RNA polymerase 2 [Prunus persi...  1139   0.0  
gb|PON93354.1| RNA-dependent RNA polymerase-type [Trema orientalis]  1138   0.0  
ref|XP_021591741.1| RNA-dependent RNA polymerase 2 [Manihot escu...  1137   0.0  
ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...  1135   0.0  
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen...  1134   0.0  
ref|XP_021674490.1| RNA-dependent RNA polymerase 2 [Hevea brasil...  1134   0.0  
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1131   0.0  
ref|XP_018831642.1| PREDICTED: RNA-dependent RNA polymerase 2 [J...  1130   0.0  
ref|XP_021825973.1| RNA-dependent RNA polymerase 2 isoform X1 [P...  1130   0.0  
ref|XP_002511431.1| PREDICTED: RNA-dependent RNA polymerase 2 is...  1126   0.0  

>ref|XP_020264489.1| LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase 2
            [Asparagus officinalis]
          Length = 1120

 Score = 1585 bits (4103), Expect = 0.0
 Identities = 788/997 (79%), Positives = 875/997 (87%), Gaps = 4/997 (0%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            +G RVEVVD RG  M+ I +EDGGE YKLEV F DVVNSF C +GN  E+NAVLLQL+YA
Sbjct: 129  RGVRVEVVDFRGGMMMAISLEDGGEVYKLEVPFGDVVNSFACRIGNGMEHNAVLLQLQYA 188

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            PKI+HR CGPSLNT+FNS RYHFCK+DV+FLWVR PDFSATSVIGRS +LCLELANGLS+
Sbjct: 189  PKIYHRICGPSLNTKFNSARYHFCKEDVEFLWVRAPDFSATSVIGRSYYLCLELANGLSS 248

Query: 361  SKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKIS 540
            SKI+K+LPFFGELGNL+L  GE   SSSKLVPI+NCP DCTV YEVLFQLNSLVH+QKIS
Sbjct: 249  SKIIKSLPFFGELGNLMLMPGEVFCSSSKLVPILNCPGDCTVSYEVLFQLNSLVHLQKIS 308

Query: 541  SANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGKQQSLSSNKNG 720
            SA++NS+LF VLS LS DT  +ILM MHKLNSTC++P+YFI ++LSRFGKQQSLSS+ N 
Sbjct: 309  SAHVNSNLFSVLSQLSSDTAIKILMMMHKLNSTCHKPIYFIQNHLSRFGKQQSLSSDGNR 368

Query: 721  PHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAI 900
              E LMSCRRVL+TPSKVYFLGPELET NY+VKH+SAYASDFLRVTF DEDRCKLP +AI
Sbjct: 369  -QEKLMSCRRVLITPSKVYFLGPELETSNYVVKHFSAYASDFLRVTFVDEDRCKLPSQAI 427

Query: 901  SMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSV 1080
            S RI KDIFSK YRTGIYNR+L+VLRDGISIGSKKFEFLAFSASQLRD+S WMFASND V
Sbjct: 428  STRIGKDIFSKPYRTGIYNRILSVLRDGISIGSKKFEFLAFSASQLRDSSIWMFASNDFV 487

Query: 1081 TANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMKYCF 1260
            TA+ IREWMGQF+EIYSVSKCAARMGQLFSSSTPTFNVP+ +V+VIPDIET TDG+KYCF
Sbjct: 488  TASSIREWMGQFNEIYSVSKCAARMGQLFSSSTPTFNVPSREVKVIPDIETNTDGVKYCF 547

Query: 1261 SDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKS 1440
            SDGIGKIS+PFA+QVAKK GLS+TPSAFQIRYGGYKGVI +DRTSFCKLSLRPSMLKFKS
Sbjct: 548  SDGIGKISVPFAKQVAKKLGLSNTPSAFQIRYGGYKGVITIDRTSFCKLSLRPSMLKFKS 607

Query: 1441 NNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAALTV 1620
            NNTMLNVTKCSESQPC+LNREIV LLSTLGVDD IFE+LQHDQ RLLD+MLT  EAAL V
Sbjct: 608  NNTMLNVTKCSESQPCYLNREIVILLSTLGVDDEIFELLQHDQMRLLDNMLTSKEAALRV 667

Query: 1621 LSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGC 1800
            L RM+GS IKTA+KML HGY PDSEPYLL LLKAYREYQLSDIRSRCR+FVP+ RVLIGC
Sbjct: 668  LGRMKGSAIKTALKMLMHGYAPDSEPYLLALLKAYREYQLSDIRSRCRIFVPRARVLIGC 727

Query: 1801 LDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRV 1980
            LDELGTL+YGQV+++V+M +EEL+NP+Q FF+K+D+STA        TKNPCLHPGDIRV
Sbjct: 728  LDELGTLEYGQVFLKVSMTDEELQNPDQAFFTKVDRSTAVVVGKVVITKNPCLHPGDIRV 787

Query: 1981 LEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKTVAPM 2160
            +EAVYD KLDN MG VDCLVFPQKGQRPHPNECSGGDLDGDLFSI WDERL+P KTVAPM
Sbjct: 788  VEAVYDPKLDN-MGWVDCLVFPQKGQRPHPNECSGGDLDGDLFSISWDERLIPSKTVAPM 846

Query: 2161 DYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCLKLAN 2340
            DYISRR R+MDHK++LEEVHKFFIDYM+NDNLGAISTAHLVHAD+EPDKALSTKCLKLAN
Sbjct: 847  DYISRRPRLMDHKVSLEEVHKFFIDYMLNDNLGAISTAHLVHADNEPDKALSTKCLKLAN 906

Query: 2341 LHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAKCSQN 2520
            LHSMAVDYAKTGA AEM   LRP +FPDFMER  K +YKS+GVLGKLYRAA +    SQN
Sbjct: 907  LHSMAVDYAKTGASAEMPSGLRPKRFPDFMERAEKPSYKSSGVLGKLYRAAINPHNISQN 966

Query: 2521 SMDITWEAIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDEILTGYVRS 2700
               I  E IPYD DLEVDGFE FL  AEE Y++YA+ LSALMKYYDI YEDEILTGY+RS
Sbjct: 967  ---IICEEIPYDYDLEVDGFEEFLIAAEEFYSRYAERLSALMKYYDIKYEDEILTGYMRS 1023

Query: 2701 RQMYLNDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSG 2880
            RQ YLNDKRKYEDMKDR+LIAV GL KE E WF+SSC+E+EF  +AAAWYHVTY  KYSG
Sbjct: 1024 RQAYLNDKRKYEDMKDRILIAVNGLHKEVEEWFRSSCNENEFKRMAAAWYHVTYQPKYSG 1083

Query: 2881 SGQRFLSFPWAICDVLLRNKASKANDN*E----GSLM 2979
            SG +FLSFPWA+CDVLL  KASK + + E    GS+M
Sbjct: 1084 SGIKFLSFPWAVCDVLLSIKASKTSTSQEVNDGGSMM 1120


>gb|ONK69464.1| uncharacterized protein A4U43_C05F23220 [Asparagus officinalis]
          Length = 999

 Score = 1585 bits (4103), Expect = 0.0
 Identities = 788/997 (79%), Positives = 875/997 (87%), Gaps = 4/997 (0%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            +G RVEVVD RG  M+ I +EDGGE YKLEV F DVVNSF C +GN  E+NAVLLQL+YA
Sbjct: 8    RGVRVEVVDFRGGMMMAISLEDGGEVYKLEVPFGDVVNSFACRIGNGMEHNAVLLQLQYA 67

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            PKI+HR CGPSLNT+FNS RYHFCK+DV+FLWVR PDFSATSVIGRS +LCLELANGLS+
Sbjct: 68   PKIYHRICGPSLNTKFNSARYHFCKEDVEFLWVRAPDFSATSVIGRSYYLCLELANGLSS 127

Query: 361  SKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKIS 540
            SKI+K+LPFFGELGNL+L  GE   SSSKLVPI+NCP DCTV YEVLFQLNSLVH+QKIS
Sbjct: 128  SKIIKSLPFFGELGNLMLMPGEVFCSSSKLVPILNCPGDCTVSYEVLFQLNSLVHLQKIS 187

Query: 541  SANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGKQQSLSSNKNG 720
            SA++NS+LF VLS LS DT  +ILM MHKLNSTC++P+YFI ++LSRFGKQQSLSS+ N 
Sbjct: 188  SAHVNSNLFSVLSQLSSDTAIKILMMMHKLNSTCHKPIYFIQNHLSRFGKQQSLSSDGNR 247

Query: 721  PHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAI 900
              E LMSCRRVL+TPSKVYFLGPELET NY+VKH+SAYASDFLRVTF DEDRCKLP +AI
Sbjct: 248  -QEKLMSCRRVLITPSKVYFLGPELETSNYVVKHFSAYASDFLRVTFVDEDRCKLPSQAI 306

Query: 901  SMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSV 1080
            S RI KDIFSK YRTGIYNR+L+VLRDGISIGSKKFEFLAFSASQLRD+S WMFASND V
Sbjct: 307  STRIGKDIFSKPYRTGIYNRILSVLRDGISIGSKKFEFLAFSASQLRDSSIWMFASNDFV 366

Query: 1081 TANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMKYCF 1260
            TA+ IREWMGQF+EIYSVSKCAARMGQLFSSSTPTFNVP+ +V+VIPDIET TDG+KYCF
Sbjct: 367  TASSIREWMGQFNEIYSVSKCAARMGQLFSSSTPTFNVPSREVKVIPDIETNTDGVKYCF 426

Query: 1261 SDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKS 1440
            SDGIGKIS+PFA+QVAKK GLS+TPSAFQIRYGGYKGVI +DRTSFCKLSLRPSMLKFKS
Sbjct: 427  SDGIGKISVPFAKQVAKKLGLSNTPSAFQIRYGGYKGVITIDRTSFCKLSLRPSMLKFKS 486

Query: 1441 NNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAALTV 1620
            NNTMLNVTKCSESQPC+LNREIV LLSTLGVDD IFE+LQHDQ RLLD+MLT  EAAL V
Sbjct: 487  NNTMLNVTKCSESQPCYLNREIVILLSTLGVDDEIFELLQHDQMRLLDNMLTSKEAALRV 546

Query: 1621 LSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGC 1800
            L RM+GS IKTA+KML HGY PDSEPYLL LLKAYREYQLSDIRSRCR+FVP+ RVLIGC
Sbjct: 547  LGRMKGSAIKTALKMLMHGYAPDSEPYLLALLKAYREYQLSDIRSRCRIFVPRARVLIGC 606

Query: 1801 LDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRV 1980
            LDELGTL+YGQV+++V+M +EEL+NP+Q FF+K+D+STA        TKNPCLHPGDIRV
Sbjct: 607  LDELGTLEYGQVFLKVSMTDEELQNPDQAFFTKVDRSTAVVVGKVVITKNPCLHPGDIRV 666

Query: 1981 LEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKTVAPM 2160
            +EAVYD KLDN MG VDCLVFPQKGQRPHPNECSGGDLDGDLFSI WDERL+P KTVAPM
Sbjct: 667  VEAVYDPKLDN-MGWVDCLVFPQKGQRPHPNECSGGDLDGDLFSISWDERLIPSKTVAPM 725

Query: 2161 DYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCLKLAN 2340
            DYISRR R+MDHK++LEEVHKFFIDYM+NDNLGAISTAHLVHAD+EPDKALSTKCLKLAN
Sbjct: 726  DYISRRPRLMDHKVSLEEVHKFFIDYMLNDNLGAISTAHLVHADNEPDKALSTKCLKLAN 785

Query: 2341 LHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAKCSQN 2520
            LHSMAVDYAKTGA AEM   LRP +FPDFMER  K +YKS+GVLGKLYRAA +    SQN
Sbjct: 786  LHSMAVDYAKTGASAEMPSGLRPKRFPDFMERAEKPSYKSSGVLGKLYRAAINPHNISQN 845

Query: 2521 SMDITWEAIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDEILTGYVRS 2700
               I  E IPYD DLEVDGFE FL  AEE Y++YA+ LSALMKYYDI YEDEILTGY+RS
Sbjct: 846  ---IICEEIPYDYDLEVDGFEEFLIAAEEFYSRYAERLSALMKYYDIKYEDEILTGYMRS 902

Query: 2701 RQMYLNDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSG 2880
            RQ YLNDKRKYEDMKDR+LIAV GL KE E WF+SSC+E+EF  +AAAWYHVTY  KYSG
Sbjct: 903  RQAYLNDKRKYEDMKDRILIAVNGLHKEVEEWFRSSCNENEFKRMAAAWYHVTYQPKYSG 962

Query: 2881 SGQRFLSFPWAICDVLLRNKASKANDN*E----GSLM 2979
            SG +FLSFPWA+CDVLL  KASK + + E    GS+M
Sbjct: 963  SGIKFLSFPWAVCDVLLSIKASKTSTSQEVNDGGSMM 999


>ref|XP_019703492.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Elaeis
            guineensis]
          Length = 1117

 Score = 1276 bits (3301), Expect = 0.0
 Identities = 636/993 (64%), Positives = 777/993 (78%), Gaps = 5/993 (0%)
 Frame = +1

Query: 10   RVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYAPKI 189
            R E++ ER +  L +F+EDGG  YKLEV F D++ +F C +      +A+L QL YAPKI
Sbjct: 127  RAEIMPEREK--LELFLEDGGVRYKLEVTFGDILATFGCRLAGRGT-DAILWQLHYAPKI 183

Query: 190  HHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKI 369
            + R  GP+++++F++ RYH CK+D +FLWVR PDFS+ S IGRSC+LCLEL  GLS S+I
Sbjct: 184  YKRISGPTVSSKFSNDRYHACKEDFQFLWVRAPDFSSNSSIGRSCYLCLELVEGLSGSEI 243

Query: 370  LKTLPFFGELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKISSAN 549
             K LPF GELG L L  G+  Y+ SKLVPII+CP + +V YE+LFQLNSLVHMQKIS   
Sbjct: 244  QKKLPFLGELGELALLMGQLYYAPSKLVPIISCPPEHSVAYEILFQLNSLVHMQKISCGQ 303

Query: 550  INSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGKQQSLSSN-KNGPH 726
            +N+DLF +L GLS+DT  +IL KMHKL STCY P+ FI + L+   K ++ SS  K+ P 
Sbjct: 304  VNNDLFDILRGLSLDTTMKILTKMHKLKSTCYEPVQFIKNQLASMRKNRNASSPIKSTPA 363

Query: 727  ENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISM 906
            EN+MSC RVLVTPSKVYFLGPELET NY+++HYS YASDF+RV+F +ED  KL  +AIS 
Sbjct: 364  ENIMSCHRVLVTPSKVYFLGPELETSNYVIRHYSEYASDFIRVSFVEEDWGKLSFDAIST 423

Query: 907  RIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTA 1086
             I++ +FSK YRTGIYNR+L++L+DGI IGSKKFEFL FSASQLR NS WMFASND VTA
Sbjct: 424  SIEQGVFSKPYRTGIYNRILSILKDGIVIGSKKFEFLVFSASQLRSNSIWMFASNDKVTA 483

Query: 1087 NDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMKYCFSD 1266
              IREWMG F++I+SVSKCAARMGQLFSSS  T +VP  DV+ I DI   TDG+ YCFSD
Sbjct: 484  ESIREWMGHFNKIHSVSKCAARMGQLFSSSLQTIDVPFRDVKKISDITVTTDGIPYCFSD 543

Query: 1267 GIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNN 1446
            GIGKISL FARQVA+KCGLSHTPSAFQIRYGGYKGVIAVDRTSF KLSLRPSMLKF+S N
Sbjct: 544  GIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRTSFQKLSLRPSMLKFESEN 603

Query: 1447 TMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAALTVLS 1626
            TML VTK SE  PC+LNREI+ LLSTLGV+D +FE++QHDQ  LLD+MLT  E  L +L 
Sbjct: 604  TMLCVTKWSEYLPCYLNREIICLLSTLGVEDEVFELMQHDQMSLLDEMLTNREITLRMLD 663

Query: 1627 RMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLD 1806
            +M     +T VKML  GY P+SEPYLLM+LKAYREYQLSDIRS+CR+FVPKGRVL+GCLD
Sbjct: 664  KMAFPDARTVVKMLMQGYEPNSEPYLLMMLKAYREYQLSDIRSKCRIFVPKGRVLLGCLD 723

Query: 1807 ELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1986
            E G+LDYGQVYV++TM +EEL++ NQ FF K+DQ+ A        T+NPCLHPGD+RVL+
Sbjct: 724  ETGSLDYGQVYVKITMTKEELQDTNQTFFDKVDQTAAAVIQKVVVTRNPCLHPGDVRVLQ 783

Query: 1987 AVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKTVAPMDY 2166
            AVY+ +LDN MGLVDC+VFPQ+G+RPHP+ECSGGDLDGDL+ + WDE+L+PPKT  PMDY
Sbjct: 784  AVYNPQLDN-MGLVDCIVFPQRGRRPHPSECSGGDLDGDLYFVCWDEKLIPPKTDTPMDY 842

Query: 2167 ISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCLKLANLH 2346
             +RR R  DH +TLEE+ KFF+DYM+ND LG ISTAHLV+AD EP KA S KCL+LANLH
Sbjct: 843  YARRQRHTDHDVTLEEIQKFFVDYMINDTLGVISTAHLVYADREPAKARSPKCLQLANLH 902

Query: 2347 SMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAKCSQNSM 2526
            SMAVD+AKTG+ AEM + LRP +FPDFMER  +  Y S G+LGKLYR+A+SH +   N+ 
Sbjct: 903  SMAVDFAKTGSSAEMPRILRPKEFPDFMERWDRPMYVSTGILGKLYRSASSHIE-RPNTD 961

Query: 2527 DITWEAIP---YDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDEILTGYVR 2697
             +  E +P   YD DL+V GFEAFL+VAE++ N Y++ LS+LM YY   +EDEILTG +R
Sbjct: 962  LMDAEMLPQSAYDYDLQVSGFEAFLEVAEDYRNMYSERLSSLMNYYGAEHEDEILTGNLR 1021

Query: 2698 SRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHVTYHTKY 2874
            SR MYL  DK+KY +MKDR+L+ V+ L KE +GWFK SC+ESE   +A+AWYHVTYH  Y
Sbjct: 1022 SRSMYLQRDKKKYGEMKDRILLGVKSLHKEVQGWFKRSCAESESLRMASAWYHVTYHPSY 1081

Query: 2875 SGSGQRFLSFPWAICDVLLRNKASKANDN*EGS 2973
              S  RFLSFPW + D LL  KASK++    G+
Sbjct: 1082 Y-SENRFLSFPWILSDALLSIKASKSHKRQRGA 1113


>ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Phoenix
            dactylifera]
          Length = 1117

 Score = 1275 bits (3299), Expect = 0.0
 Identities = 638/993 (64%), Positives = 773/993 (77%), Gaps = 5/993 (0%)
 Frame = +1

Query: 10   RVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYAPKI 189
            R E++ ER +  L IF+EDGG  YKLE+ F D++ +F C +      +A+LLQL YAPKI
Sbjct: 127  RAEIMPEREK--LDIFMEDGGVRYKLEITFGDILATFGCRLAGRGT-DAILLQLHYAPKI 183

Query: 190  HHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKI 369
            + R  G +++++F++ RYH CK+D +FLWVR  DFS+ S IGRSC+LCLEL  GL  S+I
Sbjct: 184  YKRISGRTISSKFSNDRYHACKEDFRFLWVRATDFSSNSSIGRSCYLCLELVEGLPGSEI 243

Query: 370  LKTLPFFGELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKISSAN 549
             K LPF GELG L L  GE  Y+ SKLVPII+CP + +V YE+LFQLNSLVH+QKIS   
Sbjct: 244  QKKLPFAGELGELALSMGELFYAPSKLVPIISCPPEHSVAYEILFQLNSLVHVQKISCGQ 303

Query: 550  INSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGKQQSLSSNKNGPH- 726
            +N+DLF +L GLS+DT  +IL +MHKLNSTCY P+ FI + L+   K ++ SS     H 
Sbjct: 304  VNNDLFDILRGLSLDTTMKILTRMHKLNSTCYEPMQFIKNQLANMRKNRNASSPIQSAHA 363

Query: 727  ENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISM 906
            EN+M C RVLVTPSKVYF GPELET NY+VKHYS YASDF+RV+F +ED  KL  +AIS 
Sbjct: 364  ENIMGCHRVLVTPSKVYFFGPELETSNYVVKHYSEYASDFIRVSFVEEDWGKLSSDAISP 423

Query: 907  RIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTA 1086
             I++ +FSK YRTGIYNR+L++LRDGI IGSKKFEFLAFSASQLR NS WMFASND VTA
Sbjct: 424  SIEQGLFSKPYRTGIYNRILSILRDGIVIGSKKFEFLAFSASQLRSNSVWMFASNDKVTA 483

Query: 1087 NDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMKYCFSD 1266
              IREWMG F++I+S+SKCAARMGQLFSSS  T +VP  DVR I DI   TDG+ YCFSD
Sbjct: 484  EGIREWMGHFNKIHSISKCAARMGQLFSSSLQTIDVPFRDVRTISDITVTTDGIPYCFSD 543

Query: 1267 GIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNN 1446
            GIGKISL FARQVA+KCGLSHTPSAFQIRYGGYKGVIAVDRTSF KLSLRPSMLKF+S N
Sbjct: 544  GIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRTSFQKLSLRPSMLKFESEN 603

Query: 1447 TMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAALTVLS 1626
            TML VTK SE  PC+LNREI+ LLSTLG++D +FE +QHDQ  LLD+MLT  E AL +L 
Sbjct: 604  TMLCVTKWSEYLPCYLNREIICLLSTLGIEDEVFESMQHDQMSLLDEMLTNREIALRMLD 663

Query: 1627 RMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLD 1806
            +M     +T VKML  GY P+SEPYLLM+LKAYREYQLSDIRS+CR+FVPKGRVL+GCLD
Sbjct: 664  KMAFPDTRTTVKMLMQGYEPNSEPYLLMMLKAYREYQLSDIRSKCRIFVPKGRVLLGCLD 723

Query: 1807 ELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLE 1986
            E G+LDYGQ+YV+VTM +EEL++  +  F K+DQ+ A        T+NPCLHPGD+R+L+
Sbjct: 724  ETGSLDYGQIYVKVTMTKEELQHTYETCFDKVDQTAAVVVQKVVVTRNPCLHPGDVRILQ 783

Query: 1987 AVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKTVAPMDY 2166
            AVY+ +LDN MGLVDC+VFPQKG+RPHPNECSGGDLDGDL+ + WDE+L+PPK   PMDY
Sbjct: 784  AVYNPQLDN-MGLVDCIVFPQKGRRPHPNECSGGDLDGDLYFVCWDEKLIPPKMDTPMDY 842

Query: 2167 ISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCLKLANLH 2346
             +RR R  DH +TLEE+ KFF+DYM+ND LG ISTAHLV+ADSEP KA S KCL+LANLH
Sbjct: 843  NARRQRHTDHDVTLEEIQKFFVDYMINDTLGIISTAHLVYADSEPGKAQSPKCLELANLH 902

Query: 2347 SMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAKCSQNSM 2526
            SMAVD+AKTG+ AEM + L+P  FPDFMER  ++ Y S GVLGKLYRAA+ H +   N+ 
Sbjct: 903  SMAVDFAKTGSSAEMPRILKPKMFPDFMERWDRTMYVSTGVLGKLYRAASRHIE-RPNTD 961

Query: 2527 DITWEAIP---YDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDEILTGYVR 2697
             +  E +P   YD DLE+ GFEAFL+VAE++YNQY++ LS+LMKYY   +EDEILTG +R
Sbjct: 962  PMDAEMLPQSAYDHDLEIKGFEAFLEVAEDYYNQYSERLSSLMKYYGAEHEDEILTGNLR 1021

Query: 2698 SRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHVTYHTKY 2874
            SR MYL  DK+KY +MKDR+LI V+ L KE +GWFKSSC ESE   +A+AWYHVTYH  Y
Sbjct: 1022 SRSMYLQRDKKKYGEMKDRILIGVKSLHKEVQGWFKSSCVESESLRMASAWYHVTYHPSY 1081

Query: 2875 SGSGQRFLSFPWAICDVLLRNKASKANDN*EGS 2973
              S  RFLSFPW + D LL  KASK++    G+
Sbjct: 1082 Y-SENRFLSFPWILSDALLSIKASKSHKRQAGA 1113


>ref|XP_020110295.1| probable RNA-dependent RNA polymerase 2 [Ananas comosus]
          Length = 1125

 Score = 1252 bits (3239), Expect = 0.0
 Identities = 619/989 (62%), Positives = 769/989 (77%), Gaps = 7/989 (0%)
 Frame = +1

Query: 4    GARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYAP 183
            G R E++ ER  K L +FVEDGGE YKLE++F D+  S+ C +   +  + +LLQLKYAP
Sbjct: 126  GVRAEIMPER--KKLELFVEDGGEYYKLEIMFGDINASYGCLLSKGDS-DGILLQLKYAP 182

Query: 184  KIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTS 363
            +I+ R      +++FN  RY   K+DVKF+WVR PDFS  S IG+S   CL+L   L  S
Sbjct: 183  RIYRRIFDQKSSSKFNGDRYRAFKEDVKFIWVRAPDFSVNSSIGKSTCFCLKLKERLLGS 242

Query: 364  KILKTLPFFGELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKISS 543
             +LK+LPF GELG +IL+ G    SS+KLVP+++CP D +V YE+LFQLNSLVH QK+ +
Sbjct: 243  DVLKSLPFSGELGEVILRTGNVSTSSTKLVPLVDCPSDNSVAYEILFQLNSLVHNQKLPA 302

Query: 544  ANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFG---KQQSLSSNK 714
              +NSDLF +L  L  D   RIL+KMHKL S CY P+ F+   ++ F    KQ +LSS+K
Sbjct: 303  KKVNSDLFNLLGELPFDISMRILLKMHKLKSICYEPMQFVRQQVANFRRNRKQNALSSSK 362

Query: 715  NGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVE 894
            +   E+LM C RVL+TPSKVY LGPE ET NY+VKHYSAYASDF+RV+F DED  KL  +
Sbjct: 363  STHSESLMKCYRVLITPSKVYCLGPEAETSNYVVKHYSAYASDFVRVSFVDEDWSKLSPD 422

Query: 895  AISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASND 1074
             IS RI++ +FSK ++TGI++R+L++LRDG SIG KKFEFLAFSASQLR NS WMFASND
Sbjct: 423  TISARIERGLFSKPFKTGIHDRILSILRDGFSIGLKKFEFLAFSASQLRSNSVWMFASND 482

Query: 1075 SVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMKY 1254
             VTA  IREWMGQF++I+SVSKCAARMGQLFSSS  T NVP+ +V+ IPDI+  TDG KY
Sbjct: 483  DVTAEGIREWMGQFNQIHSVSKCAARMGQLFSSSLQTLNVPSWEVKTIPDIDVTTDGNKY 542

Query: 1255 CFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKF 1434
             FSDGIGKISL FARQVA+KCGLSHTPSAFQIRYGGYKGVIAVDRTSF KLSLRPSM KF
Sbjct: 543  TFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRTSFNKLSLRPSMKKF 602

Query: 1435 KSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAAL 1614
            +SN+TMLN+TK S  QPCFLNREI+ LLSTLG++D +FE +QH+    LD MLT SE AL
Sbjct: 603  ESNSTMLNITKWSNYQPCFLNREIICLLSTLGIEDEVFESMQHEHMHFLDGMLTNSEVAL 662

Query: 1615 TVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLI 1794
             VL +M G+  +TAVKMLTHGY P SEPYL M+L+A+REYQLSD+RS+CR+FVPKGRVL+
Sbjct: 663  IVLGQMAGAETRTAVKMLTHGYEPTSEPYLSMMLQAHREYQLSDLRSKCRIFVPKGRVLV 722

Query: 1795 GCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDI 1974
            GCLDE+G L+YGQVYVR+T+ +EEL++ +Q FF K+D++TA        TKNPCLHPGDI
Sbjct: 723  GCLDEIGLLEYGQVYVRITLTKEELKDADQTFFHKVDETTAVIVGKVVVTKNPCLHPGDI 782

Query: 1975 RVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKTVA 2154
            RVLEAVYD +LD+ MGLVDC+VFPQKG+RPHPNECSGGDLDGDL+ + WD RLVP  T  
Sbjct: 783  RVLEAVYDVQLDD-MGLVDCVVFPQKGKRPHPNECSGGDLDGDLYFVCWDRRLVPDNTDT 841

Query: 2155 PMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCLKL 2334
            PMDY +RR R+MDH +TLEE+ KFF+DYM++D+LG IST HLV+ADSEP KA S KCL+L
Sbjct: 842  PMDYTARRPRIMDHDVTLEEIQKFFVDYMISDSLGIISTTHLVYADSEPMKARSPKCLEL 901

Query: 2335 ANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAKCS 2514
            A+LHSMAVD+AKTGAPA+M + L+P ++PDFMER  +S YKS GVLGKLYRA ++H + +
Sbjct: 902  ASLHSMAVDFAKTGAPADMPRVLKPKEYPDFMERWDRSMYKSTGVLGKLYRAVSTHIEET 961

Query: 2515 QNSMDITWEAIP---YDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDEILT 2685
             +       +IP   YD DLEV+GFEAFL+ A+E Y+QY++ LS+LM YY   YEDEILT
Sbjct: 962  LSFDTDFSNSIPEAAYDRDLEVEGFEAFLEAAQEFYDQYSEKLSSLMNYYGAEYEDEILT 1021

Query: 2686 GYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHVTY 2862
            G +R+R +YL  D+++Y +MKDR+L+ V+GL KE  GWF SSC++++   +A+AWYHVTY
Sbjct: 1022 GNLRNRSLYLVKDRKRYGEMKDRILVVVKGLHKEVGGWFNSSCADNDSLKMASAWYHVTY 1081

Query: 2863 HTKYSGSGQRFLSFPWAICDVLLRNKASK 2949
            H  YS    RFLSFPW I D LL  K+SK
Sbjct: 1082 HPNYSPK-NRFLSFPWTISDALLSIKSSK 1109


>ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Musa acuminata
            subsp. malaccensis]
          Length = 1106

 Score = 1206 bits (3120), Expect = 0.0
 Identities = 603/989 (60%), Positives = 751/989 (75%), Gaps = 2/989 (0%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            +G R E++ ER  K L +FVE  GE YKLEV+F D++ S  C +  +E  NA+LLQLKY+
Sbjct: 124  EGVRAEIMPER--KKLELFVEQSGEKYKLEVMFGDIIASCGCCLDGSES-NAILLQLKYS 180

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            P+ + R  GP + ++ ++ RY  C++D +F W RT DFS  + IG+SC  CL+LA GLS 
Sbjct: 181  PRSYVRIHGPMVKSKLSNDRYRACREDFQFPWFRTSDFSPDNTIGKSCCYCLQLAAGLSC 240

Query: 361  SKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKIS 540
             +IL+ LPF   L +L L +GE    S  LVPI+NCP D +V +E+L+Q+NSLVHMQKI+
Sbjct: 241  PEILRDLPFSTVLEDLNLFKGELWSPSWMLVPIVNCPSDYSVAFEILYQINSLVHMQKIT 300

Query: 541  SANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGKQQSLSSNKNG 720
               + +DLF +  GL +D+  +ILMKMHKL STCY P+ FI + L++     + SSNK+ 
Sbjct: 301  FRQVTTDLFDIFKGLPLDSAIKILMKMHKLTSTCYNPVQFIKNQLAKIKNFHAPSSNKST 360

Query: 721  PHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAI 900
              +NLMSC RVLVTP+KVY LGPELET NY+VKH+S  ASDFLRV+F DED  KLP +AI
Sbjct: 361  IAQNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSTNASDFLRVSFVDEDWSKLPSDAI 420

Query: 901  SMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSV 1080
            S+ ID++  SK +RTGIY R+L+VL+DG+ IGSKKFEFLAFSASQLR NS WMFASN+++
Sbjct: 421  SVTIDRNFLSKPHRTGIYTRILSVLKDGLHIGSKKFEFLAFSASQLRANSVWMFASNENL 480

Query: 1081 TANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVT-DGMKYC 1257
            TA  IR+WMG F  I+SVSKCAARMGQLFSSS  T NVP  DV++IPDIE  T DG KYC
Sbjct: 481  TAESIRKWMGHFSGIHSVSKCAARMGQLFSSSVQTLNVPRQDVKIIPDIEVTTEDGKKYC 540

Query: 1258 FSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFK 1437
            FSDGIGKISL FA+Q+AKKCGL +TPSAFQIRYGGYKGVIA+DRTSF KLSLR SMLKF+
Sbjct: 541  FSDGIGKISLSFAKQIAKKCGLRNTPSAFQIRYGGYKGVIAIDRTSFWKLSLRKSMLKFE 600

Query: 1438 SNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAALT 1617
            S NTML+VTK SE  PCFLNREI+ LLSTLG+ D IFE +QHDQ + L  MLT  E AL 
Sbjct: 601  STNTMLSVTKWSEYLPCFLNREIICLLSTLGIKDEIFESMQHDQMQQLGKMLTDKEVALR 660

Query: 1618 VLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIG 1797
            VL RM GS ++TA+KML  GY P+SEPYL M+LKA R+YQLSD RS+CR+FVPKGRVLIG
Sbjct: 661  VLDRMTGSEVRTAIKMLMQGYDPNSEPYLSMMLKASRDYQLSDTRSKCRIFVPKGRVLIG 720

Query: 1798 CLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIR 1977
            CLDE   LDYGQ Y++VTM +EEL+N +Q F    DQ++A        T+NPCLHPGDIR
Sbjct: 721  CLDETCNLDYGQAYIKVTMTKEELQNEDQTFLRNTDQTSAVVVGKVVVTRNPCLHPGDIR 780

Query: 1978 VLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKTVAP 2157
            VL+AVYD  LD+ MGLVDC++FPQKG RPHPNECSGGDLDGDL+ + WD+ L+PP+T  P
Sbjct: 781  VLQAVYDVGLDD-MGLVDCIIFPQKGTRPHPNECSGGDLDGDLYFVCWDKNLIPPETDTP 839

Query: 2158 MDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCLKLA 2337
            MDY  RR R+MDH +TLEE+ KFF+DYM+ND LG IST HL++ADSEP KA S KCL+LA
Sbjct: 840  MDYTPRRPRLMDHDVTLEEIQKFFVDYMINDTLGVISTTHLIYADSEPTKARSPKCLELA 899

Query: 2338 NLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAKCSQ 2517
            NLHS AVD+AKTGAPAEM + LRP +FPDFMER  +ST+ S GV+GKLYRAA+ H +   
Sbjct: 900  NLHSEAVDFAKTGAPAEMPRVLRPKEFPDFMERWDRSTFISPGVIGKLYRAASIHFEDVN 959

Query: 2518 NSMDITWEAIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDEILTGYVR 2697
            +   I+ +   YD DL+V+GFE FL  A+E+Y++Y++ LS LM YY   +EDEILTG +R
Sbjct: 960  SDATIS-KVSAYDYDLQVEGFEEFLSPAKEYYDRYSEKLSLLMNYYGAEHEDEILTGNLR 1018

Query: 2698 SRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHVTYHTKY 2874
            ++ +YL  DK++Y +MKDR+L+ VR LQ+E EGWF+ SC+E +   +A+AWYHVTYH  Y
Sbjct: 1019 NKSLYLQKDKKRYGEMKDRMLVGVRSLQQEVEGWFRCSCAERDSSRMASAWYHVTYHRDY 1078

Query: 2875 SGSGQRFLSFPWAICDVLLRNKASKANDN 2961
                  FLSFPW + DVLL  KA K + N
Sbjct: 1079 HPE-TTFLSFPWILSDVLLNIKAVKKHKN 1106


>gb|OAY66642.1| putative RNA-dependent RNA polymerase 2 [Ananas comosus]
          Length = 947

 Score = 1199 bits (3103), Expect = 0.0
 Identities = 593/937 (63%), Positives = 732/937 (78%), Gaps = 7/937 (0%)
 Frame = +1

Query: 160  LLQLKYAPKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLE 339
            + QLKYAP+I+ R       ++FN  RY   K+DVKF+WVR PDFS  S IG+S   CL+
Sbjct: 1    MFQLKYAPRIYRRIFDQKNGSKFNGDRYRAFKEDVKFIWVRAPDFSVNSSIGKSTCFCLK 60

Query: 340  LANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSL 519
            L   L  S +LK+LPF GELG +IL+ G    SS+KLVP+++CP D +V YE+LFQLNSL
Sbjct: 61   LKERLLGSDVLKSLPFSGELGEVILRTGNVSTSSTKLVPLVDCPSDNSVAYEILFQLNSL 120

Query: 520  VHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFG---K 690
            VH QK+ +  +NSDLF +L  L  D   RIL+KMHKL S CY P+ F+   ++ F    K
Sbjct: 121  VHNQKLPAKKVNSDLFNLLGELPFDISMRILLKMHKLKSICYEPMQFVRQQVANFRRNRK 180

Query: 691  QQSLSSNKNGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADE 870
            Q +LSS+K+   E+LM C RVL+TPSKVY LGPE ET NY+VKHYSAYASDF+RV+F DE
Sbjct: 181  QNALSSSKSTHSESLMKCYRVLITPSKVYCLGPEAETSNYVVKHYSAYASDFVRVSFVDE 240

Query: 871  DRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNS 1050
            D  KL  + IS RI++ +FSK ++TGI++R+L++LRDG SIG KKFEFLAFSASQLR NS
Sbjct: 241  DWSKLSPDTISARIERGLFSKPFKTGIHDRILSILRDGFSIGLKKFEFLAFSASQLRSNS 300

Query: 1051 AWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIE 1230
             WMFASND VTA  IREWMGQF++I+SVSKCAARMGQLFSSS  T NVP+ +V+ IPDI+
Sbjct: 301  VWMFASNDDVTAEGIREWMGQFNQIHSVSKCAARMGQLFSSSLQTLNVPSWEVKTIPDID 360

Query: 1231 TVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLS 1410
              TDG KY FSDGIGKISL FARQVA+KCGLSHTPSAFQIRYGGYKGVIAVDRTSF KLS
Sbjct: 361  VTTDGNKYTFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRTSFNKLS 420

Query: 1411 LRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDM 1590
            LRPSM KF+SN+TMLN+TK S  QPCFLNREI+ LLSTLG++D +FE +QH+    LD M
Sbjct: 421  LRPSMKKFESNSTMLNITKWSNYQPCFLNREIICLLSTLGIEDEVFESMQHEHMHFLDGM 480

Query: 1591 LTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVF 1770
            LT SE AL VL +M G+  +TAVKMLTHGY P SEPYL M+L+A+REYQLSD+RS+CR+F
Sbjct: 481  LTNSEVALIVLGQMAGAETRTAVKMLTHGYEPTSEPYLSMMLQAHREYQLSDLRSKCRIF 540

Query: 1771 VPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKN 1950
            VPKGRVL+GCLDE+G L+YGQVYVR+T+ +EEL++ +Q FF K+D++TA        TKN
Sbjct: 541  VPKGRVLVGCLDEIGLLEYGQVYVRITLTKEELKDADQTFFHKVDETTAVIVGKVVVTKN 600

Query: 1951 PCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDER 2130
            PCLHPGDIRVLEAVYD +LD+ MGLVDC+VFPQKG+RPHPNECSGGDLDGDL+ + WD R
Sbjct: 601  PCLHPGDIRVLEAVYDVQLDD-MGLVDCVVFPQKGKRPHPNECSGGDLDGDLYFVCWDRR 659

Query: 2131 LVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKA 2310
            LVP  T  PMDY +RR R+MDH    +E+ KFF+DYM++D+LG IST HLV+ADSEP KA
Sbjct: 660  LVPDNTDTPMDYTARRPRIMDH----DEIQKFFVDYMISDSLGIISTTHLVYADSEPMKA 715

Query: 2311 LSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRA 2490
             S KCL+LA+LHSMAVD+AKTGAPA+M + L+P ++PDFMER  +S YKS GVLGKLYRA
Sbjct: 716  RSPKCLELASLHSMAVDFAKTGAPADMPRVLKPKEYPDFMERWDRSMYKSTGVLGKLYRA 775

Query: 2491 ATSHAKCSQNSMDITWEAIP---YDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDI 2661
             ++H + + +       +IP   YD DLEV+GFEAFL+ A+E Y+QY++ LS+LM YY  
Sbjct: 776  VSTHIEETLSFDTDFSNSIPEAAYDRDLEVEGFEAFLEAAQEFYDQYSEKLSSLMNYYGA 835

Query: 2662 TYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLA 2838
             YEDEILTG +R+R +YL  D+++Y +MKDR+L+ V+GL KE  GWFKSSC++++   +A
Sbjct: 836  EYEDEILTGNLRNRSLYLVKDRKRYGEMKDRILVVVKGLHKEVGGWFKSSCADNDSLKMA 895

Query: 2839 AAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKASK 2949
            +AWYHVTYH  YS    RFLSFPW I D LL  K+SK
Sbjct: 896  SAWYHVTYHPNYSPK-NRFLSFPWTISDALLSIKSSK 931


>gb|PKA52670.1| putative RNA-dependent RNA polymerase 2 [Apostasia shenzhenica]
          Length = 1120

 Score = 1164 bits (3011), Expect = 0.0
 Identities = 598/995 (60%), Positives = 733/995 (73%), Gaps = 12/995 (1%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            +G  VE++ ER  K + +F+EDGGE YKLEV+F DV++S  C +G  E+ NA+LLQLK+ 
Sbjct: 124  EGVGVEIMPER--KKMEVFLEDGGECYKLEVMFEDVMSSHGCRLGGGEQLNAILLQLKFG 181

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            P+I+HR  GP+L ++F S R+H C+++ +FLWVRT DFS+T  +G   + CLEL   +  
Sbjct: 182  PRIYHRVSGPNLKSKFASDRFHICREEFQFLWVRTTDFSSTKAVGMCFYFCLELGKRVPV 241

Query: 361  SKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKIS 540
            S ILK+LPF  E+G+LI ++ E   S  +LVPII+CP    +PYE+LFQLNSLVH QKIS
Sbjct: 242  SDILKSLPFPCEMGDLIPRKREPFCSLLELVPIISCP---ELPYEILFQLNSLVHTQKIS 298

Query: 541  SANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFG-KQQSLSSNKN 717
                  +LF  L     DTV  I+MKMHKL STC  P+ FI   L      ++S++ NK 
Sbjct: 299  ILQA-FNLFDFLKKEDCDTVLNIIMKMHKLKSTCSNPVQFIDRELQCMRTSKKSMTVNKR 357

Query: 718  GPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEA 897
               E+L  C R LVTP+KVYFLGPELE  NY++KH+SAYASDFLRV+F DED  KL  +A
Sbjct: 358  SLPEHLNYCHRALVTPAKVYFLGPELENSNYVIKHFSAYASDFLRVSFVDEDWGKLSSDA 417

Query: 898  ISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDS 1077
            IS RI+    S+ Y+T IYNRML+VLRDGI+IGSK+FEFLAFSASQLR NS WMFASN  
Sbjct: 418  ISTRIELGFVSELYKTKIYNRMLSVLRDGIAIGSKQFEFLAFSASQLRGNSCWMFASNGD 477

Query: 1078 VTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTD----- 1242
            V+A  IR+WMG F++I SVSKCAARMGQ FSSS P   V + +V +I DI + +D     
Sbjct: 478  VSAETIRKWMGDFNKIRSVSKCAARMGQQFSSSFPAMPVQSKEVDIIEDIYSFSDSNSDA 537

Query: 1243 -GMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRP 1419
             G+KYCFSDGIGKISL FA Q++++CGL  TPSAFQIRYGGYKGVIAVD+TSFCKLSLRP
Sbjct: 538  NGVKYCFSDGIGKISLSFAEQISRRCGLDKTPSAFQIRYGGYKGVIAVDQTSFCKLSLRP 597

Query: 1420 SMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTK 1599
            SMLKF SNNTMLN+T  S+  PC+LNREI+ LLSTLG+DD +FE +Q DQ  +LDDML  
Sbjct: 598  SMLKFDSNNTMLNITSYSKYLPCYLNREIICLLSTLGIDDAVFEAMQQDQMSILDDMLKN 657

Query: 1600 SEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPK 1779
               ALTV+ ++ G     A  +L HGY P+SEPYL MLLKAYR YQLSDIRSRCR+FVPK
Sbjct: 658  KAVALTVIGKISGPEKGKAESLLMHGYEPNSEPYLSMLLKAYRAYQLSDIRSRCRIFVPK 717

Query: 1780 GRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCL 1959
            GR+L+GCLDE GTLDYGQV++R+T+ +EEL N NQ FF + D STA        TKNPCL
Sbjct: 718  GRILLGCLDESGTLDYGQVFLRITLTKEELGNMNQVFFKEADHSTAVITGKVMVTKNPCL 777

Query: 1960 HPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVP 2139
            HPGDIRVLEAVYD  LD  MG VDC+VFPQKG+RPHPNECSGGDLDGDL+ I WDERL+P
Sbjct: 778  HPGDIRVLEAVYDLHLDE-MGFVDCVVFPQKGKRPHPNECSGGDLDGDLYFISWDERLMP 836

Query: 2140 PKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALST 2319
            P+T  P+DYI    R+ DH++TL E+ KFF++YM+ND+LGAISTAHLV+ADSEP KA S 
Sbjct: 837  PQTDPPLDYIGLSSRLQDHEVTLVEIQKFFVNYMINDSLGAISTAHLVYADSEPLKARSP 896

Query: 2320 KCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATS 2499
            KCL+LA+LHSMAVD+AKTG PAEM + LRP +FPDFMER  +  Y S G+LGKLYRA +S
Sbjct: 897  KCLELASLHSMAVDFAKTGVPAEMPRILRPKEFPDFMERWDRPMYPSKGILGKLYRATSS 956

Query: 2500 HAKCSQNSMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITY 2667
            H   S  + +  W     A  YD DLEV+GFE FL+ A++HYNQYA+ LS LM Y+    
Sbjct: 957  HN--SSETSETIWSRELAAASYDMDLEVEGFEMFLKPAKDHYNQYAEKLSFLMNYFGAKS 1014

Query: 2668 EDEILTGYVRSRQMY-LNDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAA 2844
            EDEILTGY+RS   Y L DK+K+ DM DR+ IAVR L +E + W      ESE    A+A
Sbjct: 1015 EDEILTGYMRSCSDYVLKDKKKFGDMIDRITIAVRCLHEEVKSWLTGG-RESESMRTASA 1073

Query: 2845 WYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKASK 2949
            WYHVTYH  +   G +FLSFPW +CDVL+  K SK
Sbjct: 1074 WYHVTYHPDFWSPG-KFLSFPWIVCDVLMSIKDSK 1107


>gb|OVA03721.1| RNA recognition motif domain [Macleaya cordata]
          Length = 1117

 Score = 1162 bits (3007), Expect = 0.0
 Identities = 592/991 (59%), Positives = 730/991 (73%), Gaps = 10/991 (1%)
 Frame = +1

Query: 10   RVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYAPKI 189
            + E++ ER  K +  +V + GETYKL + F D+V+S  C + N EE NAVLL+LKYAPKI
Sbjct: 128  KAEIMPER--KRIEFWVVESGETYKLVIQFGDIVSSSGCCL-NGEESNAVLLKLKYAPKI 184

Query: 190  HHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKI 369
              +  GPSL + F+  RY  CK++ +FLWVRT DFS    IG+S  LC +L  G   S I
Sbjct: 185  CQKISGPSLASNFSPDRYSICKENFEFLWVRTTDFSVLKSIGQSSSLCWQLQKGTLASDI 244

Query: 370  LKTLPFF-GELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKISSA 546
            L   P + GELG+  L+  E+    S+LVP++ CP+D  + YE+LF LNSLVH QKIS  
Sbjct: 245  LNNFPRYEGELGDFTLEHDERSCFGSELVPLVRCPLDSKLSYEILFLLNSLVHAQKISLT 304

Query: 547  NINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFG---KQQSLSSNKN 717
             +N+D+ ++LS LS+DT T+IL K+ K+ STCY  +  +   L       K Q  SS   
Sbjct: 305  AVNTDVIEILSSLSMDTATKILQKLRKVKSTCYEVMSLVQSQLHSLRGDQKHQPSSSQSR 364

Query: 718  GPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEA 897
                NLMSC RVLVTPSKVYFLGPE+ET NY+VKH++AYASDF+RV F +ED  KLP +A
Sbjct: 365  LTERNLMSCHRVLVTPSKVYFLGPEVETSNYVVKHFAAYASDFMRVNFVEEDWSKLPSDA 424

Query: 898  ISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDS 1077
            I+  I++ IF K YRT IY+R+L+VLRDGI IG+K+FEFLAFSASQLR NS WMFASND 
Sbjct: 425  ITTSIEQGIFCKPYRTSIYHRILSVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASNDK 484

Query: 1078 VTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMKYC 1257
            V + D+REWMG F++I SVSKCAARMGQLFSSS  T  VP  DV +IPD+E  TDG+KYC
Sbjct: 485  VRSEDVREWMGCFNKIRSVSKCAARMGQLFSSSLQTLTVPAQDVEIIPDVEVNTDGIKYC 544

Query: 1258 FSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFK 1437
            FSDGIGKISL FA+QVA+KCGL+H PSAFQIRYGGYKGVIA+DR SF KLSLRPSMLKF 
Sbjct: 545  FSDGIGKISLSFAKQVAQKCGLNHIPSAFQIRYGGYKGVIALDRNSFRKLSLRPSMLKFD 604

Query: 1438 SNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAALT 1617
            S N MLN+T  SES PC+LNREIV+LLSTLG+DD  F  +Q +Q   LD MLT  EAAL 
Sbjct: 605  SKNRMLNITSWSESMPCYLNREIVSLLSTLGIDDEKFMAMQQEQIHRLDKMLTSREAALN 664

Query: 1618 VLSRMRGSGIKT-AVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLI 1794
            VL  M G  IK+  VKML  GY P SEPYLLM+L+A+REYQLSDIRS+CR+FV K RVL+
Sbjct: 665  VLEGMNGGDIKSILVKMLLQGYEPSSEPYLLMMLRAHREYQLSDIRSKCRIFVSKARVLM 724

Query: 1795 GCLDELGTLDYGQVYVRVTMNEEELR-NPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGD 1971
            GCLDE  TL+YGQV++RVTM   EL+    Q FF K+D  T+        TKNPCLHPGD
Sbjct: 725  GCLDETATLNYGQVFIRVTMTRAELQCGDAQTFFQKVDDKTSIVVGKVVVTKNPCLHPGD 784

Query: 1972 IRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKTV 2151
            IRVLEAVY+  L+   GLVDCLVFPQKG+RPHPNECSGGDLDGDLF + WD+ L+P ++ 
Sbjct: 785  IRVLEAVYEPALEE-KGLVDCLVFPQKGERPHPNECSGGDLDGDLFFVCWDDNLIPLQSD 843

Query: 2152 APMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCLK 2331
             PMDYI+RR R+MDH +TLEE+ KFF+DYM+ND LG ISTAHLVHAD EP+KA S+KC +
Sbjct: 844  TPMDYIARRPRLMDHDVTLEEIQKFFVDYMINDTLGMISTAHLVHADCEPEKARSSKCRQ 903

Query: 2332 LANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAKC 2511
            LA LHSMAVD+AKTGAPAEM + LRP ++PDFMER  ++ Y S+GVLGKLYR AT   K 
Sbjct: 904  LATLHSMAVDFAKTGAPAEMPRVLRPKEYPDFMEREDRAMYISSGVLGKLYR-ATIEWKE 962

Query: 2512 SQNSMDITWE---AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDEIL 2682
            + +   I  E    + YD DLEV+GFEAFL+ AE H N Y +  SALM YY    E+E+L
Sbjct: 963  NHDPNIIQSEIVAQVAYDDDLEVNGFEAFLETAENHKNMYVEKFSALMNYYGAECEEEML 1022

Query: 2683 TGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHVT 2859
            TG +R   +YL  DKR+Y +MKDR+L +++ LQKEA+GWF SSC + E   +A+AWYHVT
Sbjct: 1023 TGNLRELSVYLQRDKRRYTEMKDRILDSIKSLQKEAKGWFHSSCKDHENTKMASAWYHVT 1082

Query: 2860 YHTKYSGSGQRFLSFPWAICDVLLRNKASKA 2952
            YH K+  +G+ +LSFPW + D+LL  K+ ++
Sbjct: 1083 YHPKFCQNGKNYLSFPWIVGDILLNIKSIRS 1113


>ref|XP_020701436.1| probable RNA-dependent RNA polymerase 2 [Dendrobium catenatum]
 gb|PKU68673.1| RNA-dependent RNA polymerase 2 [Dendrobium catenatum]
          Length = 1117

 Score = 1144 bits (2959), Expect = 0.0
 Identities = 584/993 (58%), Positives = 729/993 (73%), Gaps = 8/993 (0%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAE-EYNAVLLQLKY 177
            +G  +E + ER  K + IF+EDG E+YKL V+F D+  S  C +G      N++L+QLK+
Sbjct: 123  EGVVLEFMPER--KKMEIFLEDGRESYKLVVMFEDITASHGCCLGGGGGRLNSILVQLKF 180

Query: 178  APKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLS 357
            AP+I+ R     L  +F S RYH C++   F+W+RT DFS T+ +G S + CLEL NGL 
Sbjct: 181  APRIYQRVSDAKLKPKFTSDRYHICEESFPFVWLRTSDFSLTNALGSSSYFCLELENGLY 240

Query: 358  TSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKI 537
             S I    P++ E+G +IL + E L S SKLVPII C     + Y++LFQLNSLVH QKI
Sbjct: 241  ISDIFMNFPYYSEMGEVILSKKEALCSLSKLVPIIGCSDKAVLAYDMLFQLNSLVHTQKI 300

Query: 538  SSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGK-QQSLSSNK 714
            S  + + D+  +L     DT+ +I MKMHK  STC  P+ F+   L    + Q+++ +N 
Sbjct: 301  SLLH-SPDIIDILRKEDSDTILKIFMKMHKFKSTCSNPVEFLERELLNMRRNQKAIPANN 359

Query: 715  NGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPVE 894
                +NLM C R L+TPSKVYFLGPELE  NY++KH+SAY+SDFLRV+F DED  KL  +
Sbjct: 360  QSLSQNLMRCYRALITPSKVYFLGPELENSNYVIKHFSAYSSDFLRVSFVDEDWGKLSSD 419

Query: 895  AISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASND 1074
            A+S RI++   SK Y+TGIY+R+L++L+DGI IGSKKFEFLAFSASQLR NS WMF+SN 
Sbjct: 420  ALSARIEQGFTSKAYKTGIYDRILSILQDGIIIGSKKFEFLAFSASQLRANSCWMFSSNC 479

Query: 1075 SVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMKY 1254
             VTA  IR WMG F++I SVSKCAARMGQ FSSS P   + + DV +I DI    DG+KY
Sbjct: 480  DVTAESIRNWMGDFNKIRSVSKCAARMGQQFSSSFPAMCIESKDVDIIDDIYCDADGIKY 539

Query: 1255 CFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKF 1434
            CFSDGIGK+SL  A Q+A++ G++ TPSAFQIRYGGYKGVIAVD+TSF KLSLRPSMLKF
Sbjct: 540  CFSDGIGKVSLSLAEQIAQRFGMNRTPSAFQIRYGGYKGVIAVDQTSFRKLSLRPSMLKF 599

Query: 1435 KSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAAL 1614
             S NTM+N+T  S+  P FLNREI++LLSTLGV+DG+FE +QH Q  LLD+ML   +AAL
Sbjct: 600  DSKNTMVNITSYSKYLPSFLNREIISLLSTLGVEDGVFEAMQHYQMSLLDNMLMDKDAAL 659

Query: 1615 TVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLI 1794
             V+S++ G   + A  +L  GY P S PYL MLL+AYR YQLSDIRSRCR+FVPKGR+LI
Sbjct: 660  EVISKISGPEKEKAENLLLRGYEPSSLPYLSMLLRAYRAYQLSDIRSRCRIFVPKGRILI 719

Query: 1795 GCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDI 1974
            GCLDE GTLDYGQV++RVTM +EE +N +Q FF   D +T         TKNPCLHPGDI
Sbjct: 720  GCLDESGTLDYGQVFLRVTMTKEEQKNKSQTFFKDADHATVVITGRVVVTKNPCLHPGDI 779

Query: 1975 RVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKTVA 2154
            RVLEA+ D +LD  MGLVDCLVFPQKG+RPHPNECSGGDLDGDL+ + WDERLVP +T  
Sbjct: 780  RVLEAICDPQLDE-MGLVDCLVFPQKGERPHPNECSGGDLDGDLYFVSWDERLVPLQTDP 838

Query: 2155 PMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCLKL 2334
            PMDYI  R R+ DH++TLEE+HKFF+DYM+NDNLGAISTAHLV+ADSEP KA S KCL+L
Sbjct: 839  PMDYIGLRPRLQDHEVTLEEIHKFFVDYMINDNLGAISTAHLVYADSEPLKARSPKCLQL 898

Query: 2335 ANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAKCS 2514
            ANLHSMAVD+AKTG PAEM + LRP +FPDFMER  +S Y S GVLGKLYR+AT+H   +
Sbjct: 899  ANLHSMAVDFAKTGVPAEMPRILRPKEFPDFMERWDRSMYTSKGVLGKLYRSATAHQ--N 956

Query: 2515 QNSMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDEIL 2682
            + + +  W     A  YD+DLEV+GFE FL+ AE++YNQYA+ LS LM Y+   +EDEIL
Sbjct: 957  KETSNTFWSEELAAASYDNDLEVEGFEMFLKPAEDYYNQYAEKLSFLMNYFGAVHEDEIL 1016

Query: 2683 TGYVRS--RQMYLNDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHV 2856
            TGYVRS      L DK+K+ D+ DR++IAV+ L +E + WF SSC ESE   +A+AWYH+
Sbjct: 1017 TGYVRSGGPSYVLRDKKKFGDIADRIMIAVKSLHQEVKSWF-SSCRESESLKMASAWYHI 1075

Query: 2857 TYHTKYSGSGQRFLSFPWAICDVLLRNKASKAN 2955
            T H KY  S  +FLSFPW I DVLL  K SK++
Sbjct: 1076 TCHPKY-WSSNKFLSFPWIIWDVLLNIKDSKSS 1107


>ref|XP_007211312.1| RNA-dependent RNA polymerase 2 [Prunus persica]
 gb|ONI08412.1| hypothetical protein PRUPE_5G176700 [Prunus persica]
          Length = 1118

 Score = 1139 bits (2945), Expect = 0.0
 Identities = 580/991 (58%), Positives = 716/991 (72%), Gaps = 10/991 (1%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            +G R  V+ ER R    +++ D  E YKLE+ F +++ SF C +G  E+ NA+LL+LK+ 
Sbjct: 126  EGVRAWVMPERKRVEFWVWLRD--ECYKLEIAFENIMESFGCRLGG-EKVNALLLKLKFG 182

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            P+I  +  GP++  RF++ RYH CKDD  FLWVRT DFS    IG S   C E+    S 
Sbjct: 183  PRIFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSV 242

Query: 361  SKILKTLPFF--GELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQK 534
            S + +  P++   ++ +LIL  GE+  S S+ VP++ C  D  +PYE+LFQLN+LVH QK
Sbjct: 243  SDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLVKCRSDSKLPYEILFQLNALVHSQK 302

Query: 535  ISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGKQQSL--SS 708
            IS A  +SDL + LSGLSVDT   +L K+HK  +TCY PL F+   L    +      S 
Sbjct: 303  ISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTCYDPLSFLKMQLHVLERNHKSRPSP 362

Query: 709  NKNGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLP 888
             K     N+MSC RVL+TPSK+  LGPELE  NY+VK+++AYASDF+RVTF DED  KLP
Sbjct: 363  YKRLMEHNVMSCHRVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSKLP 422

Query: 889  VEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFAS 1068
              AIS  I + IF+K +RTGIY+RML++LRDGI IG K+FEFLAFSASQLR +S WMF+S
Sbjct: 423  ANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIGEKRFEFLAFSASQLRSSSVWMFSS 482

Query: 1069 NDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGM 1248
            ND+V A DIREWMG F +I S+SKCAARMGQLFSSST T  VP  DV +IPD+ET +DG+
Sbjct: 483  NDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSDGV 542

Query: 1249 KYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSML 1428
             YCFSDGIGKISL FAR+VA+KCGL  TPSAFQIRYGGYKGVIAVD  SF KLSLR SML
Sbjct: 543  TYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSML 602

Query: 1429 KFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEA 1608
            KF+S N MLNVTK S++ PC+LNREI++LLSTLGV D  FE LQ +Q RLL  M T+  A
Sbjct: 603  KFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVKDETFEALQEEQLRLLGKMRTERGA 662

Query: 1609 ALTVLSRMRGSGIK-TAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGR 1785
            AL V  R+ G+  K T VKML HGY P++EPYL M+L+AY E  LSD++SRCR+FVPKGR
Sbjct: 663  ALNVFERLNGADSKNTLVKMLLHGYEPNAEPYLSMMLQAYYENHLSDLKSRCRIFVPKGR 722

Query: 1786 VLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHP 1965
            VL+GCLDE G LDYGQVYVR+TM + E    +Q FF K+D++T         TKNPCLHP
Sbjct: 723  VLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKVDETTLVVTGKVVVTKNPCLHP 782

Query: 1966 GDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPK 2145
            GD+RVL+AVYD  L+    +VDCL+FPQKG+RPHPNECSGGDLDGDLF I WD+ LVP  
Sbjct: 783  GDVRVLDAVYDVVLEE-KNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDLVPSH 841

Query: 2146 TVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKC 2325
            TV PMDY +RR R+MDH +TLEE+ KFF+DYM+NDNLGAISTAHLVHAD EPDKAL+ KC
Sbjct: 842  TVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPDKALNPKC 901

Query: 2326 LKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHA 2505
            L+LA+LHSMAVD+AKTGAPAEMS+ L+P +FPDFMER+ K  Y SNG LGKLYRA     
Sbjct: 902  LQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVV--G 959

Query: 2506 KCSQNSMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYED 2673
               Q   ++ W        YD DLEVDG E+ L+VA+ H + Y + +  +M YY    ED
Sbjct: 960  SVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYGAVTED 1019

Query: 2674 EILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWY 2850
            EILTG +R+R  YL  D R+Y DMKDR+ ++++ LQKEA+G F+SSC  SE   +A+AWY
Sbjct: 1020 EILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGLFESSCPVSEHQRMASAWY 1079

Query: 2851 HVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 2943
            HVTYH  Y       LSFPW + D+LL  KA
Sbjct: 1080 HVTYHPSYFQQDMNCLSFPWIVGDILLNIKA 1110


>gb|PON93354.1| RNA-dependent RNA polymerase-type [Trema orientalis]
          Length = 1123

 Score = 1138 bits (2944), Expect = 0.0
 Identities = 580/991 (58%), Positives = 711/991 (71%), Gaps = 10/991 (1%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            +G R  V+ ER R    +++  G E YKLE+ F D++ +    +G AE   A+LL+LKY 
Sbjct: 132  EGVRSWVIPERDRVEFWVWL--GEECYKLEIRFEDILETTGYCLG-AENLFAILLKLKYG 188

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            PK++ R  GP + +RF + RYH CK+D +FLWVRT DFS    IG S  +C E+   +  
Sbjct: 189  PKVYKRISGPGIASRFIADRYHICKEDAEFLWVRTTDFSELKSIGHSTTICWEMKEEVLA 248

Query: 361  SKILKTLPFFGE-LGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKI 537
            S   K  P + E L  LIL++G +  S S+ VPII CP + ++ YE LFQLNSLVH QKI
Sbjct: 249  SDTFKCFPCYRESLVELILEEGAEYCSVSETVPIIKCPSNSSLGYETLFQLNSLVHTQKI 308

Query: 538  SSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGK--QQSLSSN 711
            S A ++S+L ++ S LS +T   +L K+HKL STCY P+ F+  N     K  + S S+N
Sbjct: 309  SFAAVDSNLIELFSSLSDETSNAVLKKLHKLKSTCYDPMSFVKINAHILEKIPESSPSAN 368

Query: 712  KNGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPV 891
            K     N+MSC R L+TP K++ LGPELE  NY+VKH++ YA+DF+RVTF +ED  KLP 
Sbjct: 369  KRLTDHNVMSCHRALITPLKIFCLGPELEKSNYVVKHFATYANDFMRVTFVEEDWSKLPA 428

Query: 892  EAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASN 1071
             A+S  I++ +F+K YRT IY+R+L++LRDGI IGSK++EFLAFSASQLR NS WMFASN
Sbjct: 429  NAVSTSIEQGMFAKPYRTAIYDRVLSILRDGIVIGSKRYEFLAFSASQLRSNSVWMFASN 488

Query: 1072 DSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMK 1251
            ++V A DIREWMG F +I S+SKCAARMGQLFSSST T  VP  DV +IPD+E   DG+ 
Sbjct: 489  ENVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLTVPVQDVEIIPDVEVTRDGID 548

Query: 1252 YCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLK 1431
            YCFSDGIGKISLPFARQVA+KCGLSHTPSAFQIRYGGYKGVIAVDR S+ KLSLR SMLK
Sbjct: 549  YCFSDGIGKISLPFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRNSYRKLSLRSSMLK 608

Query: 1432 FKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAA 1611
            F+S N MLNVTK S++ PCFLNREIVTLLSTLGV D +F  LQ +Q RLL  M T  EAA
Sbjct: 609  FESKNRMLNVTKWSDAMPCFLNREIVTLLSTLGVKDEVFLALQQEQLRLLGKMRTDREAA 668

Query: 1612 LTVLSRMRGS-GIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRV 1788
            L VL ++ GS      VKML  GY P+ EPYL M+L++Y E QLSD++SRCRVFVPKGRV
Sbjct: 669  LNVLEKLNGSDSSNILVKMLLQGYEPNMEPYLSMMLQSYYENQLSDLKSRCRVFVPKGRV 728

Query: 1789 LIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPG 1968
            LIGCLDE GTLDYGQ++VR++M + EL   NQ+FF K+D  T+        TKNPCLHPG
Sbjct: 729  LIGCLDETGTLDYGQIFVRISMTKAELETGNQDFFRKVDDKTSIVLGKLVVTKNPCLHPG 788

Query: 1969 DIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKT 2148
            DIRVLEA+Y+ +L+   GLVDCLVFPQKG+RPHPNECSGGDLDGDLF I WD  L+PP+T
Sbjct: 789  DIRVLEAIYNAELEE-KGLVDCLVFPQKGERPHPNECSGGDLDGDLFFISWDSGLIPPRT 847

Query: 2149 VAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCL 2328
               MDYI RR R+M H +T+EE+ KFF+DYM+ND LG ISTAHLVHAD EPDKA S KCL
Sbjct: 848  TPAMDYIGRRPRIMAHDVTIEEIQKFFVDYMINDTLGTISTAHLVHADREPDKAFSEKCL 907

Query: 2329 KLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAK 2508
            +LA LHSMAVD+AKTGAPAEM K L+P +FPDFMERL K  Y SNGVLG+LYRA  S   
Sbjct: 908  QLATLHSMAVDFAKTGAPAEMPKVLKPREFPDFMERLDKPMYISNGVLGQLYRATVSSK- 966

Query: 2509 CSQNSMDITW-----EAIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYED 2673
              Q   ++ W     +AI YD DLEV GFE F+  AE H + Y D LS +M YY +  ED
Sbjct: 967  -MQECSNLVWSEEIAQAI-YDRDLEVSGFEDFIATAESHRDMYMDKLSGIMNYYGVETED 1024

Query: 2674 EILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWY 2850
            E+LTG  R R  YL  D R+Y D KDR+L+ ++ L  EA GWFK+SC       +A+AWY
Sbjct: 1025 EVLTGNFRKRAAYLQRDNRRYGDTKDRILLLLKNLHSEARGWFKNSCEVQNHQQMASAWY 1084

Query: 2851 HVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 2943
            HVTYH  +    +  LSFPW   D+LL  K+
Sbjct: 1085 HVTYHPDFFHKSKNCLSFPWIKGDILLNIKS 1115


>ref|XP_021591741.1| RNA-dependent RNA polymerase 2 [Manihot esculenta]
 gb|OAY30901.1| hypothetical protein MANES_14G068000 [Manihot esculenta]
 gb|OAY30902.1| hypothetical protein MANES_14G068000 [Manihot esculenta]
          Length = 1120

 Score = 1137 bits (2940), Expect = 0.0
 Identities = 574/993 (57%), Positives = 721/993 (72%), Gaps = 10/993 (1%)
 Frame = +1

Query: 4    GARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYAP 183
            G R  ++ ER R    ++V D  E YKL+V F DV+ +  C +G  E+ +A+LL+L+Y P
Sbjct: 129  GVRGWLMPERRRVEFWVWVND--ECYKLDVRFDDVLEAVGCCLGG-EKVDAILLKLRYGP 185

Query: 184  KIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTS 363
            KI+ R  GP + ++F++ RYH CK+D  F+WVRT DFS+   IG++   C E+  GL  S
Sbjct: 186  KIYKRISGPHIASKFSADRYHMCKEDFDFVWVRTADFSSVKSIGQATSFCWEIEEGLEAS 245

Query: 364  KILKTLPFFGE-LGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKIS 540
             I  + P++ E   +++L+ GE+ +S+S++VP+  C  D  + YE+LFQLNSLVH  KIS
Sbjct: 246  DIFTSFPYYIEDRKDIVLEDGEEFHSTSEIVPLAKCGSDSKLAYEILFQLNSLVHTHKIS 305

Query: 541  SANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFG---KQQSLSSN 711
             A++++DL  +L  L++DT   IL K+HKL  TCY PL FI   L   G   K+  +SS 
Sbjct: 306  LASVDTDLINILGSLTIDTAMIILQKLHKLTFTCYDPLSFIKKQLHVPGRNLKKPFISSR 365

Query: 712  KNGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPV 891
            KN    N+  C R L+TPSK+Y LGPELE  NY+VK++++YASDF+R+TF +ED  KLP 
Sbjct: 366  KNFTDHNITICHRALITPSKIYCLGPELEASNYVVKNFASYASDFMRITFVEEDWSKLPA 425

Query: 892  EAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASN 1071
             AIS  I + IF+K +RT IY+RML+VLRDGI IG+K+FEFLAFSASQLR NS WMFASN
Sbjct: 426  NAISTSIQQGIFAKPFRTEIYHRMLSVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASN 485

Query: 1072 DSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMK 1251
            D V A DIREWMG F++I S+SKCAARMGQLFS+S  TF VP  DV +IPDIE  +DG+ 
Sbjct: 486  DDVKAEDIREWMGCFNKIRSISKCAARMGQLFSASRQTFVVPAQDVEIIPDIEVNSDGIG 545

Query: 1252 YCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLK 1431
            YCFSDGIGKISL FARQVA+KCGL+ TPSAFQIRYGGYKGVIAVDR S  KLSLR SMLK
Sbjct: 546  YCFSDGIGKISLSFARQVAQKCGLNQTPSAFQIRYGGYKGVIAVDRDSCRKLSLRGSMLK 605

Query: 1432 FKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAA 1611
            F+S N MLNVTK SES PC+LNREI++LLSTLGV D  FE LQ  Q RLL  ML+  EAA
Sbjct: 606  FESENRMLNVTKWSESMPCYLNREIISLLSTLGVKDETFEGLQQQQLRLLGRMLSNREAA 665

Query: 1612 LTVLSRMRGSGIKT-AVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRV 1788
            L  L  +  +  K   VKML  GY P+ EPYL M+L+AY E  L ++RSRCR+FVPKGR+
Sbjct: 666  LDALENLSWADSKNLLVKMLLQGYEPNVEPYLSMMLQAYHENLLVELRSRCRIFVPKGRI 725

Query: 1789 LIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPG 1968
            LIGCLDE G LDYGQVYV +TM + EL+N +Q +F ++D+ T+        TKNPCLHPG
Sbjct: 726  LIGCLDESGLLDYGQVYVCITMTKAELQNIDQSYFRRVDEKTSIVTGKVVVTKNPCLHPG 785

Query: 1969 DIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKT 2148
            D+RVL+AVY+ +L+   GLVDC++FPQKG+RPHPNECSGGDLDGDLF I WD+ L+P +T
Sbjct: 786  DVRVLDAVYEVELEE-QGLVDCILFPQKGERPHPNECSGGDLDGDLFFISWDKGLIPSQT 844

Query: 2149 VAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCL 2328
            V+PMDY+ RR R+MDH +TLEE+ KFF+DYM+ND LGAISTAHLVHAD EPDKA S KCL
Sbjct: 845  VSPMDYLGRRPRIMDHNVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKARSDKCL 904

Query: 2329 KLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAK 2508
            +LA LHSMAVD+AKTGAPAEM + L+P +FPDFMER  K+TY SNGVLGKLYR       
Sbjct: 905  QLAALHSMAVDFAKTGAPAEMPRFLKPKEFPDFMERTDKTTYISNGVLGKLYRGIV--GS 962

Query: 2509 CSQNSMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDE 2676
             S+      W        YD DLEV GFE F+ +A  H + Y + LS LMKYY+ TYEDE
Sbjct: 963  TSREGSKFVWSEKIAEATYDRDLEVKGFEEFIDMALSHRDIYVEKLSGLMKYYEATYEDE 1022

Query: 2677 ILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYH 2853
            ILTG +R + MYL  D R+Y DMKDR++++++ LQ E + WF+SSC   E   LA+AWYH
Sbjct: 1023 ILTGNLRKKAMYLQRDNRRYGDMKDRIMLSLKSLQNEVKEWFESSCQPKEHQPLASAWYH 1082

Query: 2854 VTYHTKYSGSGQRFLSFPWAICDVLLRNKASKA 2952
            VTYH  Y   G   LSFPW + D+LL  K++ +
Sbjct: 1083 VTYHPSYFQEGVNCLSFPWIVGDILLNIKSANS 1115


>ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
          Length = 1115

 Score = 1135 bits (2937), Expect = 0.0
 Identities = 584/997 (58%), Positives = 726/997 (72%), Gaps = 10/997 (1%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            KG +  ++ ER  K +  FV  G E YKLE+ F+DV  +   +     + NA+LL+L+YA
Sbjct: 125  KGVKANIMPER--KRVEFFVFKGKECYKLEINFSDVFTA-SGYRLRGRQSNALLLRLRYA 181

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            PKI+ +  G ++ ++F++ RYH CK+DV+FLWVRT DFS ++ IG S   C EL  GL +
Sbjct: 182  PKIYQKISGSTVASKFSTDRYHICKEDVEFLWVRTTDFSESNSIGWSSSFCWELEEGLLS 241

Query: 361  SKILKTLPFFGE-LGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKI 537
            S IL++ P++ E LG+LI+++ EQ    S+LVP+IN  +D T+ YE+L+QLNSLVH QK+
Sbjct: 242  SDILRSFPYYKEELGDLIVEKEEQFCCESELVPLINSGLDSTLAYEILYQLNSLVHTQKV 301

Query: 538  SSANINSD-LFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGKQQS--LSS 708
            S   + SD L ++L  LSVDT    L+++HK+ STCY PL  I   LS   + Q   LSS
Sbjct: 302  SLRAVKSDDLIEILCCLSVDTANGFLLQLHKMKSTCYDPLPIIQRQLSSLLRNQKSLLSS 361

Query: 709  NKNGPHE-NLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKL 885
            ++ G  E NLMSC RVLVTP+K+Y LGPELE  N +V+HY+AY+SDFLRV+F +ED  KL
Sbjct: 362  SQRGLREGNLMSCHRVLVTPTKIYCLGPELEKSNCVVRHYAAYSSDFLRVSFVEEDWTKL 421

Query: 886  PVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFA 1065
               A+S  I++ IFSK YRT IY R+L++LRDGI IG+K+FEFLAFSASQLR NS WMFA
Sbjct: 422  HSGALSTSIEEGIFSKPYRTRIYYRILSILRDGIKIGAKRFEFLAFSASQLRSNSVWMFA 481

Query: 1066 SNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDG 1245
            SN++V A +IREWMG F++I SVSKCAARMGQLFSSS     V  H V +IPD+E   DG
Sbjct: 482  SNETVKAENIREWMGSFNKIRSVSKCAARMGQLFSSSVEASKVQAHHVEIIPDVEITRDG 541

Query: 1246 MKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSM 1425
            ++YCFSDGIGKIS  FAR+VA+KCGLS TPSAFQIRYGGYKGVIAVDR SFCKLSLRPSM
Sbjct: 542  IQYCFSDGIGKISQSFAREVAQKCGLSQTPSAFQIRYGGYKGVIAVDRNSFCKLSLRPSM 601

Query: 1426 LKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSE 1605
            LKF SN+  LNVTK SES PC+LNREIV+LLSTLGV+D  FE+LQ  Q  LLD MLT  E
Sbjct: 602  LKFDSNDRTLNVTKWSESMPCYLNREIVSLLSTLGVEDEKFEMLQCKQISLLDKMLTNRE 661

Query: 1606 AALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGR 1785
            AAL VL    G      VKML HGY P  EPYL M+L+A+RE+QLSDIRS+CR+ VPKGR
Sbjct: 662  AALDVLECTAGDAKTVLVKMLLHGYEPGVEPYLSMILRAHREHQLSDIRSKCRILVPKGR 721

Query: 1786 VLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHP 1965
            VL+GCLDE G L+YGQV++RVTM + E  + +Q FF ++D++T+        TKNPCLHP
Sbjct: 722  VLLGCLDETGILNYGQVFIRVTMTKAEQCHDDQSFFHQVDETTSIVIGKVVITKNPCLHP 781

Query: 1966 GDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPK 2145
            GDIRVL+A+Y+  L+   GLVDCLVFPQKG+RPHPNECSGGDLDGDLF + WDE L+P +
Sbjct: 782  GDIRVLDAIYESALEE-KGLVDCLVFPQKGERPHPNECSGGDLDGDLFFVCWDENLIPSQ 840

Query: 2146 TVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKC 2325
            T  PMDYI RR R+MDH++TLEE+ K+F++YM+ND LG ISTAH++HAD EP KA S KC
Sbjct: 841  TDTPMDYIGRRSRLMDHEVTLEEIQKYFVNYMINDTLGVISTAHVIHADREPSKARSPKC 900

Query: 2326 LKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHA 2505
            L+LA LHSMAVD+AKTGAPAEM + L+P ++PDFMER  +  Y S G+LGKLYR+     
Sbjct: 901  LQLAALHSMAVDFAKTGAPAEMPRVLKPKEYPDFMERGDRPMYASPGILGKLYRSTIDST 960

Query: 2506 KCSQNSMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYED 2673
            K      D  W        YD DLEV GFE+F++ AE H   Y + LS LM YY    ED
Sbjct: 961  K--NQEPDFVWNEEVAQAAYDKDLEVRGFESFVETAESHKKLYTEKLSTLMNYYGARSED 1018

Query: 2674 EILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWY 2850
            EILTG +RS  + L  DK +Y +MKDRVLIAVR LQKEA+GWF SSC   E   +A+AWY
Sbjct: 1019 EILTGNLRSPSLCLQRDKIRYGEMKDRVLIAVRNLQKEAKGWFHSSCKSHECHKMASAWY 1078

Query: 2851 HVTYHTKYSGSGQRFLSFPWAICDVLLRNKASKANDN 2961
            HVTYH KY  +G   LSFPW + D+LL  K+ K   N
Sbjct: 1079 HVTYHPKYCHNGMNSLSFPWILDDILLNIKSVKKMRN 1115


>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
            [Prunus mume]
          Length = 1100

 Score = 1134 bits (2934), Expect = 0.0
 Identities = 579/991 (58%), Positives = 714/991 (72%), Gaps = 10/991 (1%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            +G R  V+ ER R    +++ D  E YKLE+ F +++ SF C +G  E+ NA+LL+LK+ 
Sbjct: 108  EGVRAWVMPERKRVEFWVWLRD--ECYKLEIAFENIMESFGCRLGG-EKVNALLLKLKFG 164

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            P+I  +  GP++  RF++ RYH CKDD  FLWVRT DFS    IG S   C E+    S 
Sbjct: 165  PRIFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSL 224

Query: 361  SKILKTLPFF--GELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQK 534
            S + +  P++   ++ +LIL  GE+  S S+ VP++ C  D  +PYE+LFQLN+LVH QK
Sbjct: 225  SDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLVKCGSDSKLPYEILFQLNALVHSQK 284

Query: 535  ISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGKQQSL--SS 708
            IS A  +SDL + LSGLSVDT   +L K+HK  +TCY P  F+   L    +      S 
Sbjct: 285  ISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTCYDPQSFLKMQLHVLERNHKSRPSP 344

Query: 709  NKNGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLP 888
             K     N+MSC RVL+TPSK+  LGPELE  NY+VK+++AYASDF+RVTF DED  KLP
Sbjct: 345  YKRLTEHNVMSCHRVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSKLP 404

Query: 889  VEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFAS 1068
              AIS  I + IF+K +RTGIY+RML++LRDGI IG K FEFLAFSASQLR +S WMF+S
Sbjct: 405  ANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIGEKNFEFLAFSASQLRSSSVWMFSS 464

Query: 1069 NDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGM 1248
            ND+V A DIREWMG F +I S+SKCAARMGQLFSSST T  VP  DV +IPD+ET +DG+
Sbjct: 465  NDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSDGV 524

Query: 1249 KYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSML 1428
             YCFSDGIGKISL FAR+VA+KCGL  TPSAFQIRYGGYKGVIAVD  SF KLSLR SML
Sbjct: 525  TYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSML 584

Query: 1429 KFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEA 1608
            KF+S NTMLNVTK S++ PC+LNREI++L+STLGV D  FE LQ +Q RLL  M T+  A
Sbjct: 585  KFESKNTMLNVTKWSDAMPCYLNREIISLMSTLGVKDETFEALQEEQLRLLGKMRTERGA 644

Query: 1609 ALTVLSRMRGSGIK-TAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGR 1785
            AL VL R+ G+  K T VKML HGY P+ EPYL M+L+AY E  LSD++SRCR+FVPKGR
Sbjct: 645  ALNVLERLNGADSKNTLVKMLLHGYEPNVEPYLSMMLQAYYENHLSDLKSRCRIFVPKGR 704

Query: 1786 VLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHP 1965
            VL+GCLDE G LDYGQVYVR+TM + E    +Q FF K+D++T         TKNPCLHP
Sbjct: 705  VLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKVDETTCIVTGKVVVTKNPCLHP 764

Query: 1966 GDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPK 2145
            GD+RVL+AVYD  L+    +VDCL+FPQKG+RPHPNECSGGDLDGDLF I WD+ LVP  
Sbjct: 765  GDVRVLDAVYDVVLEE-KNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDLVPSH 823

Query: 2146 TVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKC 2325
            TV PMDY +RR R+MDH +TLEE+ KFF+DYM+NDNLGAISTAHLVHAD EPDKAL+ KC
Sbjct: 824  TVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPDKALNPKC 883

Query: 2326 LKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHA 2505
            L+LA+LHSMAVD+AKTGAPAEMS+ L+P +FPDFMER+ K  Y SNG LGKLYRA     
Sbjct: 884  LQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVV--G 941

Query: 2506 KCSQNSMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYED 2673
               Q   ++ W        YD DLEVDG E+ L+VA+ H + Y + +  +M  Y    ED
Sbjct: 942  SVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDTYIEKMRTIMNNYGAVTED 1001

Query: 2674 EILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWY 2850
            EILTG +R+R  YL  D R+Y DMKDR+ ++++ LQKEA+G F+SSC  SE   +A+AWY
Sbjct: 1002 EILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGMFESSCPVSEHQRMASAWY 1061

Query: 2851 HVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 2943
            HVTYH  Y       LSFPW + D+LL  KA
Sbjct: 1062 HVTYHPSYFQQDMNCLSFPWIVGDILLNIKA 1092


>ref|XP_021674490.1| RNA-dependent RNA polymerase 2 [Hevea brasiliensis]
          Length = 1120

 Score = 1134 bits (2933), Expect = 0.0
 Identities = 569/993 (57%), Positives = 726/993 (73%), Gaps = 10/993 (1%)
 Frame = +1

Query: 4    GARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYAP 183
            G R  ++ ER R    ++V +  + YK++V F D++++  C +G  +  NA+LL+L+Y P
Sbjct: 129  GVRGWLMPERRRVEFWVWVNN--DCYKMDVRFEDILDAVGCCLGGGK-VNALLLKLRYGP 185

Query: 184  KIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLSTS 363
            KI+ R  GP + ++F+  RYH CK+D  F+WVR  DFS+   IG++   C E+  GL TS
Sbjct: 186  KIYKRISGPDVASKFSVDRYHICKEDFDFIWVRAADFSSVKSIGQATSFCWEIEEGLETS 245

Query: 364  KILKTLPFFGE-LGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKIS 540
             I  + P++ E   +L+L+ GE+ +S+S++VP+  C  D  + YE++FQLNSLVH  KIS
Sbjct: 246  DIFTSFPYYTEDRKDLVLEDGEEFHSTSEIVPLAKCGPDSKLAYEIIFQLNSLVHTHKIS 305

Query: 541  SANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFG---KQQSLSSN 711
             A++++DL  VLS L++DT   IL K+HKL+ TCY PL FI   L   G   K+ S+SS 
Sbjct: 306  LASVDTDLINVLSSLTIDTAMMILQKLHKLSFTCYDPLSFIKKQLHVPGRNLKKPSMSSR 365

Query: 712  KNGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPV 891
            KN    N+ +C R L+TPSK+Y LGPELET NY+VK++++YASDF+R+TF +ED  KLP 
Sbjct: 366  KNYTDHNITNCHRALITPSKIYCLGPELETSNYVVKNFASYASDFMRITFVEEDWSKLPA 425

Query: 892  EAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASN 1071
             AIS  I + IF+K +RT IY+R+L++LRDGI IG+K+FEFLAFSASQLR NS WMFASN
Sbjct: 426  NAISTSIQQGIFAKPFRTEIYHRILSILRDGIVIGAKRFEFLAFSASQLRSNSVWMFASN 485

Query: 1072 DSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMK 1251
            D V A  IREWMG F++I S+SKCAARMGQLFS+S  TF VP  DV +IPDIE  +DG+ 
Sbjct: 486  DDVKAEGIREWMGCFNKIRSISKCAARMGQLFSASRQTFVVPAQDVEIIPDIEVTSDGIG 545

Query: 1252 YCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLK 1431
            YCFSDGIGKISL FARQVA+KCGL+ TPSAFQIRYGGYKGV+AVDR SF KLSLR SM K
Sbjct: 546  YCFSDGIGKISLSFARQVAQKCGLNQTPSAFQIRYGGYKGVVAVDRNSFRKLSLRGSMCK 605

Query: 1432 FKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAA 1611
            F+S+N MLNVTK SES PC+LNREIV+LLSTLGV D IFE LQ  Q RLL  ML+  EAA
Sbjct: 606  FESDNRMLNVTKWSESMPCYLNREIVSLLSTLGVKDEIFEGLQQQQLRLLSRMLSNREAA 665

Query: 1612 LTVLSRMRGSGIKT-AVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRV 1788
            L VL  +  +  K   VKML  GY P+ EPYL M+L+AY E  L ++RSRCR+FVPKGR+
Sbjct: 666  LDVLENLTWANSKNFLVKMLLQGYEPNVEPYLSMMLQAYHENLLVELRSRCRIFVPKGRI 725

Query: 1789 LIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPG 1968
            LIGCLDE   L YGQV+VR+TM + EL++ +Q FF ++D+ T+        TKNPCLHPG
Sbjct: 726  LIGCLDETRLLHYGQVFVRITMTKAELQSIDQSFFRRVDEKTSIVTGKVVVTKNPCLHPG 785

Query: 1969 DIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKT 2148
            D+RVL+AVY+ +L+   GLVDC++FPQKG+RPHPNECSGGDLDGDLF I WD+ L+P +T
Sbjct: 786  DVRVLDAVYEVELEE-KGLVDCILFPQKGERPHPNECSGGDLDGDLFFISWDKGLIPSQT 844

Query: 2149 VAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCL 2328
              PMDY+ RR R+MDH +TLEE+ KFF+DYM+ND LGAISTAHLVHADSEP+KA S KCL
Sbjct: 845  ECPMDYLGRRPRIMDHNVTLEEIQKFFVDYMINDTLGAISTAHLVHADSEPEKARSKKCL 904

Query: 2329 KLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAK 2508
            +LA LHSMAVD+AK+GAPAEM + L+P +FPDFMER  K+TY SNGVLGKLYR     A 
Sbjct: 905  QLAALHSMAVDFAKSGAPAEMPRALKPKEFPDFMERTDKNTYVSNGVLGKLYRGTIDSA- 963

Query: 2509 CSQNSMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDE 2676
             S+      W        YD DLEV G E F+++A    + Y + LS LM YY+  YEDE
Sbjct: 964  -SRERSKFVWSEKVAEATYDRDLEVKGLEEFIEMALSQKDMYIEKLSGLMNYYEAKYEDE 1022

Query: 2677 ILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYH 2853
            ILTG +R++ MYL  D R+Y DMKDR+L+++R LQ EA+ WF+SSC   E+  LA+AWYH
Sbjct: 1023 ILTGNLRNKAMYLQRDNRRYGDMKDRILLSLRSLQNEAKEWFESSCQPKEYHPLASAWYH 1082

Query: 2854 VTYHTKYSGSGQRFLSFPWAICDVLLRNKASKA 2952
            VTYH  Y   G   LSFPW + D+LL  K++ +
Sbjct: 1083 VTYHPSYFQEGVNCLSFPWIVGDILLNIKSANS 1115


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
 emb|CBI15062.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1127

 Score = 1131 bits (2925), Expect = 0.0
 Identities = 584/1001 (58%), Positives = 722/1001 (72%), Gaps = 14/1001 (1%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            +G +  V+ ER R  +  +V+  GE YKLEV F DV+ S  C +G  +  NA+LL+LKYA
Sbjct: 126  EGVKTLVMPERNR--VEFWVDKDGERYKLEVPFDDVLESSACCLGGGK-VNALLLKLKYA 182

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            PKI  +F GP++ ++F++ RYH  K+D +FLW+RT DFS+   +G+S   C E+  G   
Sbjct: 183  PKIFQKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWEIKEGFPA 242

Query: 361  SKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKIS 540
              I  + P++ +L  L L+QGE   S S LVP++ C     + YE+LFQLNSLVH QKIS
Sbjct: 243  LDIFASFPYYKDLTELTLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNSLVHAQKIS 302

Query: 541  SANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFG---KQQSLSSN 711
             A +++DL ++LS L VDT   IL K+HK  ST Y P+ FI           K    SS+
Sbjct: 303  LAAVDTDLIEILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINMNIKNLPPSSH 362

Query: 712  KNGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPV 891
                + N+MSC RVLVTPSK+Y LGPELE+ NY+VKHY+AYASDF+RV+F +ED  KLP 
Sbjct: 363  SRLTNNNVMSCHRVLVTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSFVEEDWSKLPS 422

Query: 892  EAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASN 1071
             A+SM I K  F+  +RT IY+R+L++LR+GI IG+K+F+FLAFSASQLR NS WMFASN
Sbjct: 423  NALSMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSNSVWMFASN 482

Query: 1072 DSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMK 1251
            D V  +DIREWMG F +I SVSKCAARMGQLFSSS  T  VP  DV VIPDIE  +DG  
Sbjct: 483  DKVRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFG 542

Query: 1252 YCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLK 1431
            YCFSDGIGKISL FA+QVA+KCGL  TPSAFQIRYGGYKGVIAVDR SF KLSLR SMLK
Sbjct: 543  YCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLK 602

Query: 1432 FKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAA 1611
            F+S N MLNVTK SES PC+LNREIV+LLSTLGV+D  FE L ++Q  LLD MLT  +AA
Sbjct: 603  FESQNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDENFEALLNEQMHLLDKMLTNRQAA 662

Query: 1612 LTVLSRMRGSGIKTAV-KMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRV 1788
            L VL  M G   K  + KML  GY P+ EPYL M+L+AYRE QLSDIR+RCR+FVPK RV
Sbjct: 663  LDVLESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCRIFVPKARV 722

Query: 1789 LIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPG 1968
            LIGCLDE G L+YGQVYVRVTM + E +  NQ FF K+D +T+        TKNPCLHPG
Sbjct: 723  LIGCLDETGILNYGQVYVRVTMTKAEHKCRNQSFFQKVDDTTSVVIGKVIVTKNPCLHPG 782

Query: 1969 DIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKT 2148
            DIRVL+AVY+ +L+   GLVDC++FPQKG+RPHPNECSGGDLDGD F I WDE L+P +T
Sbjct: 783  DIRVLDAVYEVELEE-KGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWDEGLIPSQT 841

Query: 2149 VAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCL 2328
             APMDY SRR R+MDH +TLEE+ KFF+DYM+ND LG ISTAHLVHAD EP+KA S KCL
Sbjct: 842  EAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEKARSKKCL 901

Query: 2329 KLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHAK 2508
            +LA LHSMAVD+AKTGAPAEM + L+P +FPDFMER+ K  Y SNG LGKLYR AT  ++
Sbjct: 902  ELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYR-ATIASR 960

Query: 2509 CSQNSMDITWEAIP---YDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDEI 2679
             ++ S  +    IP   YD DLEVDGFE FL++A+ H   YA+ ++ LM +Y    EDE+
Sbjct: 961  VNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAESEDEM 1020

Query: 2680 LTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHV 2856
            LTG +R++ MYL  D R++ +MKDR+LI+V+ LQKEA+ W   SC   +   +A+AWYHV
Sbjct: 1021 LTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMASAWYHV 1080

Query: 2857 TYHTKYSGSGQRFLSFPWAICDVLL------RNKASKANDN 2961
            TYH+ +S     FLSFPW + +VLL        KA  + DN
Sbjct: 1081 TYHSTFSSQTPNFLSFPWIVGEVLLVIKSANSRKAETSKDN 1121


>ref|XP_018831642.1| PREDICTED: RNA-dependent RNA polymerase 2 [Juglans regia]
          Length = 1110

 Score = 1130 bits (2923), Expect = 0.0
 Identities = 581/987 (58%), Positives = 722/987 (73%), Gaps = 6/987 (0%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            +G RV V+ ERGR    ++   GGE YK+EVL  +V+ +  C  G   + NA+LL+LK+ 
Sbjct: 122  EGVRVWVMPERGRVEFWLW--QGGECYKMEVLLPEVLEAVGC--GFEGDVNALLLKLKHG 177

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            PKI+ R  GP++ ++F++ RYH CK+D  +LWVRT DFS T  IG+S     E+  GLS 
Sbjct: 178  PKIYKRISGPNIFSKFSADRYHICKEDFDYLWVRTIDFSVTKSIGQSTSFYWEI-EGLSA 236

Query: 361  SKILKTLPFFGE-LGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQKI 537
            S I K  P + E + +LIL+ GE+  S+S +VP++ C + C + YE+LFQLNSLVH QKI
Sbjct: 237  SDIFKCFPRYREDMKDLILEDGEEFRSTSTIVPLVKCELSCNLAYEILFQLNSLVHTQKI 296

Query: 538  SSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGK--QQSLSSN 711
              A   +DL ++LS L+V+T   IL K+HKLN TCY P+ F+   L   G+  ++   S+
Sbjct: 297  CLAGAGADLIEILSRLNVETALMILQKLHKLNFTCYEPVSFVKMQLHVLGRNCKRVPPSS 356

Query: 712  KNGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLPV 891
                  N+MSC R LVTPSK+Y LGPELE+ NY+VK+++ YASDF+RV+F +ED  KLP 
Sbjct: 357  YKSLDPNVMSCHRALVTPSKIYCLGPELESSNYVVKNFAPYASDFMRVSFVEEDWGKLPA 416

Query: 892  EAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFASN 1071
             AIS  I++ IF+K +RTGIY+R+L+VLRDGI IG K+FEFLAFSASQLR NS WMFASN
Sbjct: 417  NAISTSIERGIFAKPFRTGIYHRILSVLRDGIVIGPKRFEFLAFSASQLRSNSVWMFASN 476

Query: 1072 DSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMK 1251
            + V A DIREWMG F++I SVSKCAARMGQLFSSS  T  VP  DV +IPD+E  +DG+ 
Sbjct: 477  EKVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSFQTLVVPIQDVEIIPDVEVTSDGID 536

Query: 1252 YCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLK 1431
            YCFSDGIGKISL FA QVA+KCGL+ TPSAFQIRYGGYKGV+AVDR S+ KLSLR SMLK
Sbjct: 537  YCFSDGIGKISLSFAGQVAQKCGLNQTPSAFQIRYGGYKGVVAVDRDSYMKLSLRGSMLK 596

Query: 1432 FKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAA 1611
            F+S   MLNVTK SES PC+LNREI++LLSTLGV+D +FE LQ +Q  LL  ML+  EAA
Sbjct: 597  FESKTRMLNVTKWSESMPCYLNREIISLLSTLGVEDQVFEKLQEEQLCLLGKMLSNREAA 656

Query: 1612 LTVLSRMRGSGIKT-AVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRV 1788
            L VL  + GS  +   VKML  GY P+ EPYL M+L+A+ E  LSD++SRCR+FVPKGR+
Sbjct: 657  LNVLQSLNGSDSRNILVKMLLQGYEPNQEPYLSMMLQAHYENLLSDLKSRCRIFVPKGRI 716

Query: 1789 LIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPG 1968
            L+GCLDE G L+YGQVYVRVTM + EL++ +Q FF K+D +T         TKNPCLHPG
Sbjct: 717  LVGCLDETGILNYGQVYVRVTMTKAELQSWDQSFFRKVDDATCVIVGSVVVTKNPCLHPG 776

Query: 1969 DIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPKT 2148
            DIRVLEA+Y+  L+   GLVDCLVFPQKG+RPHPNECSGGDLDGD F I WD+ L+P + 
Sbjct: 777  DIRVLEAIYEVDLEE-RGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDLIPSQI 835

Query: 2149 VAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCL 2328
              PMDY  RR RVMDH +TLEE+ KFF+DYM+ND LGAISTAHLV AD EPDKA S KCL
Sbjct: 836  EPPMDYTGRRPRVMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVLADREPDKARSKKCL 895

Query: 2329 KLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHA- 2505
            +LANLHS+AVD+AKTGAPAEM + L+P +FPDFMER+ K  Y SNGVLGKLY A    A 
Sbjct: 896  ELANLHSIAVDFAKTGAPAEMPRVLKPKEFPDFMERIEKPMYTSNGVLGKLYHAILGSAT 955

Query: 2506 KCSQNSMDITWEAIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYEDEILT 2685
            +   N +      + YD +LEVDGFEAFL++AE H  QY + LS LMKYY    EDEILT
Sbjct: 956  RERSNLVSEKIGQVIYDHNLEVDGFEAFLEIAESHKEQYIEKLSTLMKYYGAENEDEILT 1015

Query: 2686 GYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHVTY 2862
            G +R+R+ YL  D RKY DMKDR+L +V+ LQ EA+ W +SSC   E   LA+AWYHV++
Sbjct: 1016 GNLRNREAYLQRDNRKYGDMKDRILHSVKRLQNEAKEWVESSCKNHEHQQLASAWYHVSF 1075

Query: 2863 HTKYSGSGQRFLSFPWAICDVLLRNKA 2943
            H  YS  G   LSFPW + D+LL  K+
Sbjct: 1076 HPSYSREGFNCLSFPWILGDILLNIKS 1102


>ref|XP_021825973.1| RNA-dependent RNA polymerase 2 isoform X1 [Prunus avium]
          Length = 1118

 Score = 1130 bits (2922), Expect = 0.0
 Identities = 577/991 (58%), Positives = 713/991 (71%), Gaps = 10/991 (1%)
 Frame = +1

Query: 1    KGARVEVVDERGRKMLLIFVEDGGETYKLEVLFADVVNSFECFVGNAEEYNAVLLQLKYA 180
            +G R  V+ ER R    ++  D  E YKLE+ F +++ SF C +G  E+ NA+LL+LK+ 
Sbjct: 126  QGVRAWVMPERKRVEFWVWQRD--ECYKLEIAFENIMESFGCGLGG-EKVNALLLKLKFG 182

Query: 181  PKIHHRFCGPSLNTRFNSVRYHFCKDDVKFLWVRTPDFSATSVIGRSCFLCLELANGLST 360
            P+I  +  GP++  RF++ RYH CKDD  FLWVRT DFS    IG S   C E+    S 
Sbjct: 183  PRIFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSV 242

Query: 361  SKILKTLPFF--GELGNLILKQGEQLYSSSKLVPIINCPVDCTVPYEVLFQLNSLVHMQK 534
            S + +  P++   ++ +LIL  GE+  S S+ VP++ C  D  +PYE+LFQLN+LVH QK
Sbjct: 243  SDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLVKCRSDSKLPYEILFQLNALVHSQK 302

Query: 535  ISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYRPLYFIHDNLSRFGKQQSL--SS 708
            IS A  +SDL + LSGLSVDT   +L K+HK  +TC  PL F+   L    +      S 
Sbjct: 303  ISLAAADSDLIEFLSGLSVDTTNVLLEKLHKRKTTCSDPLSFLKMQLHVLERNHKSRPSP 362

Query: 709  NKNGPHENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYSAYASDFLRVTFADEDRCKLP 888
             K     N+MSC RVL+TPSK+  LGPELE  NY+VK+++AYASDF+RVTF DED  KLP
Sbjct: 363  YKRLMEHNVMSCHRVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSKLP 422

Query: 889  VEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKFEFLAFSASQLRDNSAWMFAS 1068
              AIS  I + IF+K +RTGIY+RML++LRDGI IG K+FEFLAFSASQLR +S WMF+S
Sbjct: 423  ANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIGEKRFEFLAFSASQLRSSSVWMFSS 482

Query: 1069 NDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTFNVPTHDVRVIPDIETVTDGM 1248
            ND+V A DIREWMG F +I S+SKCAARMGQLFSSST T  VP  DV +IPD+ET +DG+
Sbjct: 483  NDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSDGV 542

Query: 1249 KYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSML 1428
             YCFSDGIGKISL FAR+VA+KCGL  TPSAFQIRYGGYKGVIAVD  SF KLSLR SML
Sbjct: 543  TYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSML 602

Query: 1429 KFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEA 1608
            KF+S N MLNVTK S++ PC+LNREI++LLSTLGV D  FE LQ +Q RLL  M T+  A
Sbjct: 603  KFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVKDETFEALQEEQLRLLGKMRTERGA 662

Query: 1609 ALTVLSRMRGSGIK-TAVKMLTHGYGPDSEPYLLMLLKAYREYQLSDIRSRCRVFVPKGR 1785
            AL VL R+ G+  K T VKML HGY P+ EPYL M+L+AY E  LSD++SRCR+FVPKGR
Sbjct: 663  ALNVLERLNGADSKNTLVKMLLHGYEPNVEPYLSMMLQAYYENHLSDLKSRCRIFVPKGR 722

Query: 1786 VLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHP 1965
            VL+GCLDE G L+YGQVYVR+TM + E    +Q FF K+D++T         TKNPCLHP
Sbjct: 723  VLVGCLDETGNLNYGQVYVRITMTKAEQEMGDQSFFQKVDETTCIVTGKVVVTKNPCLHP 782

Query: 1966 GDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERLVPPK 2145
            GD+RVL+AVYD  L+    +VDCL+FPQKG+RPHPNECSGGDLDGDLF I WD+ LVP  
Sbjct: 783  GDVRVLDAVYDVVLEE-KNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDLVPSY 841

Query: 2146 TVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKC 2325
            TV PMDY +RR R+MDH +TLEE+ KFF+DYM+NDNLGAISTAHLVHAD EPDKAL+ KC
Sbjct: 842  TVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADREPDKALNPKC 901

Query: 2326 LKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAATSHA 2505
            ++LA+LHSMAVD+AKTGAPAEMS+ L+P +FPDFMER+ K  Y SNG LGKLYRA     
Sbjct: 902  VQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVV--G 959

Query: 2506 KCSQNSMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYED 2673
               Q   ++ W        YD DLEVDG E+ L+VA+ H + Y + +  +M YY    ED
Sbjct: 960  SVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTIMNYYGAVTED 1019

Query: 2674 EILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWY 2850
            EILTG +R+R  YL  D R+Y DMKDR+ ++++ LQKEA+G F+SSC   E   +A+AWY
Sbjct: 1020 EILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGLFESSCPVGEHQRMASAWY 1079

Query: 2851 HVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 2943
            HVTYH  Y       LSFPW + D+LL  KA
Sbjct: 1080 HVTYHPSYFQQDMNCLSFPWIVGDILLNIKA 1110


>ref|XP_002511431.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Ricinus
            communis]
 gb|EEF52033.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
          Length = 983

 Score = 1126 bits (2913), Expect = 0.0
 Identities = 567/967 (58%), Positives = 712/967 (73%), Gaps = 9/967 (0%)
 Frame = +1

Query: 85   LEVLFADVVNSFECFVGNAEEYNAVLLQLKYAPKIHHRFCGPSLNTRFNSVRYHFCKDDV 264
            +E+ F DV+ +  C +G  +  NA+LL+LKY  +I+ +  GP + ++F++ RYH CK+D 
Sbjct: 1    MEISFEDVLETVGCRLGG-DTLNAILLKLKYGARIYKKISGPDIASKFSADRYHMCKEDF 59

Query: 265  KFLWVRTPDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGN-LILKQGEQLYSS 441
             F+WVRT DFS+   +G+S   C E+  GL  S I K+ P++ E    +IL+ GE+  S+
Sbjct: 60   DFIWVRTTDFSSVKSVGQSTSFCWEIEEGLEASDIFKSFPYYTEAREEVILEDGEEWGSA 119

Query: 442  SKLVPIINCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKM 621
            S++VP++ C  D  +PYE+LFQLNSLVH QKIS A ++++L   L  L++DT T IL K+
Sbjct: 120  SEIVPLVKCGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDTATMILQKL 179

Query: 622  HKLNSTCYRPLYFIHDNLSRFG---KQQSLSSNKNGPHENLMSCRRVLVTPSKVYFLGPE 792
            HKL  TCY PL FI   L   G   K+   SS+KN  + N+MSC R L+TPSK+Y LGPE
Sbjct: 180  HKLAVTCYDPLAFIKKQLHVPGRNLKRPFFSSSKNLVNHNIMSCHRALITPSKIYCLGPE 239

Query: 793  LETCNYIVKHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAV 972
            LE+ NY+VK++++YASDF+RVTF +ED  KLP  AISM I + IF+K +RTGIY+R+L++
Sbjct: 240  LESSNYVVKNFASYASDFMRVTFVEEDWSKLPANAISMSIQRGIFAKPFRTGIYHRILSI 299

Query: 973  LRDGISIGSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAAR 1152
            LRDGI IG+KKFEFLAFSASQLR NS WMFASND   A +IREWMG F++I+S+SKCAAR
Sbjct: 300  LRDGIVIGAKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAAR 359

Query: 1153 MGQLFSSSTPTFNVPTHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHT 1332
            MGQLFSSS  TF V   D+ +IPDIE  +DG+ YCFSDGIGKISL FARQVA+KCGL+ T
Sbjct: 360  MGQLFSSSKQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRT 419

Query: 1333 PSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVT 1512
            PSAFQIRYGGYKGVIAVDR SF KLSLR SM KF+S N MLNVTK SES PC+LNREI+T
Sbjct: 420  PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNREIIT 479

Query: 1513 LLSTLGVDDGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKT-AVKMLTHGYGPD 1689
            LL+TLGV D IFE LQ  Q +LL+ MLT  E+AL VL  +  +  K   +KML  GY P+
Sbjct: 480  LLTTLGVKDEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGYEPN 539

Query: 1690 SEPYLLMLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEEL 1869
             EPYL M+L+AY E  L ++RSRCR+FVPKGR+LIGCLDE   LDYGQVYVR+TM + EL
Sbjct: 540  VEPYLSMMLQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAEL 599

Query: 1870 RNPNQEFFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQ 2049
            ++ +Q  F ++D++TA        TKNPCLHPGDIRVLEAVY+ +L+   GLVDC++FPQ
Sbjct: 600  QDADQASFHRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEE-KGLVDCILFPQ 658

Query: 2050 KGQRPHPNECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFF 2229
            KG+RPHPNECSGGDLDGD F I WD+ L+P +T +PMDY  RR R MDH +TLEE+ KFF
Sbjct: 659  KGERPHPNECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDHDVTLEEIQKFF 718

Query: 2230 IDYMMNDNLGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRP 2409
            IDYM+ND LGAISTAHLVHAD EPDKA S+KCL+LA LHSMAVD+AKTGAPAEM K L+P
Sbjct: 719  IDYMINDTLGAISTAHLVHADREPDKARSSKCLQLAELHSMAVDFAKTGAPAEMPKALKP 778

Query: 2410 SKFPDFMERLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWEAI---PYDSDLEVDGF 2580
             +FPDFMER+ K  Y S GVLGKLYR      +  Q S  +  E I    YD DLEV GF
Sbjct: 779  KEFPDFMERIDKKMYISGGVLGKLYRGTLDSTR-QQRSKFVWTENIAEATYDHDLEVKGF 837

Query: 2581 EAFLQVAEEHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVL 2757
            E F+++A  H + Y + LS LM YY+   EDEILTG ++++ MYL  D R+Y D KDR+L
Sbjct: 838  EEFVEIAISHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRIL 897

Query: 2758 IAVRGLQKEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRN 2937
            I+V+ LQKEA+ WF+S C   E   LA+AWYHVTYH  Y   G   LSFPW + D+LL  
Sbjct: 898  ISVKSLQKEAKEWFESCCQAKEKQRLASAWYHVTYHPSYFQEGITCLSFPWIVADILLNI 957

Query: 2938 KASKAND 2958
            K++ + +
Sbjct: 958  KSANSKN 964