BLASTX nr result

ID: Ophiopogon24_contig00024128 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00024128
         (515 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258754.1| H/ACA ribonucleoprotein complex non-core sub...    87   7e-17
gb|ONK76803.1| uncharacterized protein A4U43_C03F32330 [Asparagu...    67   9e-10
ref|XP_020259425.1| uncharacterized protein LOC109835798 isoform...    66   1e-09
ref|XP_020259424.1| uncharacterized protein LOC109835798 isoform...    66   1e-09
ref|XP_020259421.1| uncharacterized protein LOC109835798 isoform...    66   1e-09
ref|XP_020259418.1| uncharacterized protein LOC109835798 isoform...    66   1e-09
ref|XP_020259406.1| LOW QUALITY PROTEIN: H/ACA ribonucleoprotein...    66   2e-09
gb|ONK65668.1| uncharacterized protein A4U43_C07F39450 [Asparagu...    66   2e-09
ref|XP_020276575.1| H/ACA ribonucleoprotein complex non-core sub...    65   3e-09
ref|XP_020682734.1| H/ACA ribonucleoprotein complex non-core sub...    58   1e-06
ref|XP_010905257.1| PREDICTED: H/ACA ribonucleoprotein complex n...    55   9e-06

>ref|XP_020258754.1| H/ACA ribonucleoprotein complex non-core subunit NAF1-like
           [Asparagus officinalis]
          Length = 584

 Score = 87.4 bits (215), Expect = 7e-17
 Identities = 47/79 (59%), Positives = 56/79 (70%)
 Frame = -3

Query: 477 PSNGPSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAAVNQREMRPPSMQ 298
           P+N  +LV  GLM QGG GQVPFGC   +P  ++ + +EQS  QAP  VNQ EMRPPSMQ
Sbjct: 466 PTNFSALV--GLMSQGGLGQVPFGC---DPHCSMALSSEQSYVQAPLFVNQGEMRPPSMQ 520

Query: 297 FNGRQFNLGRPSSRGRRPY 241
           +NG QFN G  SSRGR P+
Sbjct: 521 YNGEQFNHGSSSSRGRLPH 539


>gb|ONK76803.1| uncharacterized protein A4U43_C03F32330 [Asparagus officinalis]
          Length = 687

 Score = 67.0 bits (162), Expect = 9e-10
 Identities = 51/129 (39%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
 Frame = -3

Query: 513 PGNFPWFFGSANPSNGPSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAA 334
           PGNF WF G ++     SL   G+ GQ GF  VPFG GN+NP        EQS G  P A
Sbjct: 394 PGNFQWFGGLSS-----SLALAGITGQAGFSHVPFGYGNLNP------SQEQSHGLPPLA 442

Query: 333 VNQR-EMRPPSMQFN-GRQFNLGRPSSRGRRPYQXXXXXXXXXXXXSQQNG*RNACPNVH 160
            NQ+ ++R  S+QFN GR     R   RGRR Y             +Q NG   A  N  
Sbjct: 443 FNQQADIRCVSLQFNQGRSSASSR--GRGRRAYPRGGRQSFAHQGGNQHNG-CAAARNSG 499

Query: 159 GIWNIFSCK 133
             W    CK
Sbjct: 500 TSWRTDICK 508


>ref|XP_020259425.1| uncharacterized protein LOC109835798 isoform X4 [Asparagus
           officinalis]
          Length = 318

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 46/111 (41%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -3

Query: 513 PGNFPWFFGSANPSNGPSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAA 334
           PGNF WF G ++     SL   G+ GQ GF  VPFG GN+NP        EQS G  P A
Sbjct: 221 PGNFQWFGGLSS-----SLALAGITGQAGFSHVPFGYGNLNP------SQEQSHGLPPLA 269

Query: 333 VNQR-EMRPPSMQFN-GRQFNLGRPSSRGRRPYQXXXXXXXXXXXXSQQNG 187
            NQ+ ++R  S+QFN GR     R   RGRR Y             +Q NG
Sbjct: 270 FNQQADIRCVSLQFNQGRSSASSR--GRGRRAYPRGGRQSFAHQGGNQHNG 318


>ref|XP_020259424.1| uncharacterized protein LOC109835798 isoform X3 [Asparagus
           officinalis]
          Length = 324

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 46/111 (41%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -3

Query: 513 PGNFPWFFGSANPSNGPSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAA 334
           PGNF WF G ++     SL   G+ GQ GF  VPFG GN+NP        EQS G  P A
Sbjct: 227 PGNFQWFGGLSS-----SLALAGITGQAGFSHVPFGYGNLNP------SQEQSHGLPPLA 275

Query: 333 VNQR-EMRPPSMQFN-GRQFNLGRPSSRGRRPYQXXXXXXXXXXXXSQQNG 187
            NQ+ ++R  S+QFN GR     R   RGRR Y             +Q NG
Sbjct: 276 FNQQADIRCVSLQFNQGRSSASSR--GRGRRAYPRGGRQSFAHQGGNQHNG 324


>ref|XP_020259421.1| uncharacterized protein LOC109835798 isoform X2 [Asparagus
           officinalis]
 ref|XP_020259423.1| uncharacterized protein LOC109835798 isoform X2 [Asparagus
           officinalis]
          Length = 330

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 46/111 (41%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -3

Query: 513 PGNFPWFFGSANPSNGPSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAA 334
           PGNF WF G ++     SL   G+ GQ GF  VPFG GN+NP        EQS G  P A
Sbjct: 233 PGNFQWFGGLSS-----SLALAGITGQAGFSHVPFGYGNLNP------SQEQSHGLPPLA 281

Query: 333 VNQR-EMRPPSMQFN-GRQFNLGRPSSRGRRPYQXXXXXXXXXXXXSQQNG 187
            NQ+ ++R  S+QFN GR     R   RGRR Y             +Q NG
Sbjct: 282 FNQQADIRCVSLQFNQGRSSASSR--GRGRRAYPRGGRQSFAHQGGNQHNG 330


>ref|XP_020259418.1| uncharacterized protein LOC109835798 isoform X1 [Asparagus
           officinalis]
 ref|XP_020259419.1| uncharacterized protein LOC109835798 isoform X1 [Asparagus
           officinalis]
 ref|XP_020259420.1| uncharacterized protein LOC109835798 isoform X1 [Asparagus
           officinalis]
          Length = 333

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 46/111 (41%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -3

Query: 513 PGNFPWFFGSANPSNGPSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAA 334
           PGNF WF G ++     SL   G+ GQ GF  VPFG GN+NP        EQS G  P A
Sbjct: 236 PGNFQWFGGLSS-----SLALAGITGQAGFSHVPFGYGNLNP------SQEQSHGLPPLA 284

Query: 333 VNQR-EMRPPSMQFN-GRQFNLGRPSSRGRRPYQXXXXXXXXXXXXSQQNG 187
            NQ+ ++R  S+QFN GR     R   RGRR Y             +Q NG
Sbjct: 285 FNQQADIRCVSLQFNQGRSSASSR--GRGRRAYPRGGRQSFAHQGGNQHNG 333


>ref|XP_020259406.1| LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex non-core
           subunit NAF1-like [Asparagus officinalis]
          Length = 580

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 46/111 (41%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -3

Query: 513 PGNFPWFFGSANPSNGPSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAA 334
           PGNF WF G ++     SL   G+ GQ GF  VPFG GN+NP        EQS G  P A
Sbjct: 483 PGNFQWFGGLSS-----SLALAGITGQAGFSHVPFGYGNLNP------SQEQSHGLPPLA 531

Query: 333 VNQR-EMRPPSMQFN-GRQFNLGRPSSRGRRPYQXXXXXXXXXXXXSQQNG 187
            NQ+ ++R  S+QFN GR     R   RGRR Y             +Q NG
Sbjct: 532 FNQQADIRCVSLQFNQGRSSASSR--GRGRRAYPRGGRQSFAHQGGNQHNG 580


>gb|ONK65668.1| uncharacterized protein A4U43_C07F39450 [Asparagus officinalis]
          Length = 624

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
 Frame = -3

Query: 513 PGNFPWFFGSANPSNGPSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAA 334
           PGNF WF G ++ S        G++GQ GF  VPFG GN+NP        EQS G  P A
Sbjct: 514 PGNFQWFDGLSSSST-----LAGIIGQSGFSHVPFGYGNLNP------SQEQSHGLPPPA 562

Query: 333 VNQR-EMRPPSMQFN-GRQFNLGRPSSRGRRPYQXXXXXXXXXXXXSQQNG*R 181
            NQ+ ++R  S+QFN GR     R   RGRR Y             +Q NG R
Sbjct: 563 FNQQADIRCASLQFNQGRSSASSR--GRGRRAYPRGGRQSFAHQGGNQHNGTR 613


>ref|XP_020276575.1| H/ACA ribonucleoprotein complex non-core subunit NAF1-like
           [Asparagus officinalis]
          Length = 611

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 45/111 (40%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -3

Query: 513 PGNFPWFFGSANPSNGPSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAA 334
           PGNF WF G ++ S        G++GQ GF  VPFG GN+NP        EQS G  P A
Sbjct: 514 PGNFQWFDGLSSSST-----LAGIIGQSGFSHVPFGYGNLNP------SQEQSHGLPPPA 562

Query: 333 VNQR-EMRPPSMQFN-GRQFNLGRPSSRGRRPYQXXXXXXXXXXXXSQQNG 187
            NQ+ ++R  S+QFN GR     R   RGRR Y             +Q NG
Sbjct: 563 FNQQADIRCASLQFNQGRSSASSR--GRGRRAYPRGGRQSFAHQGGNQHNG 611


>ref|XP_020682734.1| H/ACA ribonucleoprotein complex non-core subunit NAF1-like
           [Dendrobium catenatum]
 gb|PKU84615.1| hypothetical protein MA16_Dca015474 [Dendrobium catenatum]
          Length = 614

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 38/81 (46%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
 Frame = -3

Query: 465 PSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAAVNQREMRPPSMQFNGR 286
           PSL P   +GQ  F  +PF  G +N  G  G+GNEQ   QAP          PSMQFN  
Sbjct: 527 PSLQP---LGQNNFAPLPFSNGYINGPGVPGLGNEQIQSQAPLPF------APSMQFNSA 577

Query: 285 -----QFNLGRPSSRGRRPYQ 238
                QFN G   SRGRRPYQ
Sbjct: 578 SPPSLQFNGGNSWSRGRRPYQ 598


>ref|XP_010905257.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like [Elaeis guineensis]
          Length = 775

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 33/83 (39%), Positives = 42/83 (50%)
 Frame = -3

Query: 489 GSANPSNGPSLVPVGLMGQGGFGQVPFGCGNMNPWGNVGVGNEQSDGQAPAAVNQREMRP 310
           G  NPS     + +G   QG F QV FGC N    G     N Q+  Q P+A  + ++RP
Sbjct: 684 GPVNPS--ACTMSLGSGAQGNFSQVTFGCNNTQEQGAPSSCNVQNHEQPPSATGRGDIRP 741

Query: 309 PSMQFNGRQFNLGRPSSRGRRPY 241
           P       QFN GR S RGR+P+
Sbjct: 742 P------MQFNPGRSSFRGRKPH 758


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