BLASTX nr result

ID: Ophiopogon24_contig00024112 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00024112
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63172.1| hypothetical protein 20.t00024 [Asparagus officin...    62   5e-09
gb|ABB55317.1| zinc transporter, putative [Asparagus officinalis]      60   8e-08

>gb|ABD63172.1| hypothetical protein 20.t00024 [Asparagus officinalis]
          Length = 204

 Score = 62.4 bits (150), Expect = 5e-09
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = -2

Query: 399 KSDRRTIFRKPVFFFGD--SNEVEELYDRNYKWLHHIEDQCFFLSSMEWMIPLSYLQSMS 226
           +S  R    KP + FGD    +    YD +YKWL  + D+  FL +ME M P+SY Q  S
Sbjct: 53  ESPSRKPIVKPGYLFGDFVDFDASTAYDGDYKWLRKVGDRNLFLPNMERMFPISYFQCAS 112

Query: 225 IPQQMD*DLTKAKLRVAIGTIS 160
           +P+ MD  L K +  VA+GT++
Sbjct: 113 VPRHMDWPLVKNQDGVALGTLT 134


>gb|ABB55317.1| zinc transporter, putative [Asparagus officinalis]
          Length = 617

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
 Frame = -2

Query: 378 FRKPVFFFGDSNEVEE--LYDRNYKWLHHIEDQCFFLSSMEWMIPLSYLQSMSIPQQMD* 205
           + KP F FGDS +++   + + NYKWL  + ++  FL ++E M PLSY Q  SIPQ M+ 
Sbjct: 502 YPKPSFLFGDSVKMDSKRVSEGNYKWLRTVNNRRLFLPNLERMWPLSYYQCASIPQSMNW 561

Query: 204 DLTKAKLRVAIGTISNRDVFPACHGRDITGLLLGLVRQDYP*GTL 70
           +L + +  VA G I++R    A    +   L  GL ++++  G L
Sbjct: 562 ELVQDQGGVATGHITHRGTHSAGF-NNFMALKPGLFQKEHHVGEL 605


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