BLASTX nr result

ID: Ophiopogon24_contig00023912 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00023912
         (378 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020275344.1| ribosome-recycling factor, chloroplastic [As...    77   2e-14

>ref|XP_020275344.1| ribosome-recycling factor, chloroplastic [Asparagus officinalis]
 gb|ONK62291.1| uncharacterized protein A4U43_C07F2390 [Asparagus officinalis]
          Length = 277

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 37/53 (69%), Positives = 43/53 (81%)
 Frame = +1

Query: 178 SDPYQRRENHTGHVCVNANLLSSTANYVRLLEGAGAFAIRSLSTNHIVKKRTG 336
           +DPYQRRENHT H+CV+A +LSSTAN VRL EG GAF+ RS +   IVKKRTG
Sbjct: 28  TDPYQRRENHTRHLCVHAKVLSSTANCVRLQEGTGAFSSRSPTAKQIVKKRTG 80


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