BLASTX nr result
ID: Ophiopogon24_contig00023830
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00023830
(389 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK65740.1| uncharacterized protein A4U43_C06F440 [Asparagus ... 95 5e-20
ref|XP_020269344.1| LOW QUALITY PROTEIN: pentatricopeptide repea... 95 5e-20
gb|PKU82244.1| Pentatricopeptide repeat-containing protein [Dend... 74 7e-13
ref|XP_020679014.1| pentatricopeptide repeat-containing protein ... 73 2e-12
ref|XP_010926893.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-11
ref|XP_020576653.1| pentatricopeptide repeat-containing protein ... 71 1e-11
ref|XP_008807161.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-11
ref|XP_003566988.1| PREDICTED: pentatricopeptide repeat-containi... 69 4e-11
gb|OAY74994.1| Pentatricopeptide repeat-containing protein, chlo... 66 5e-10
gb|PKA62106.1| Pentatricopeptide repeat-containing protein [Apos... 66 5e-10
dbj|BAF05756.2| Os01g0674700 [Oryza sativa Japonica Group] 64 2e-09
ref|XP_020103187.1| pentatricopeptide repeat-containing protein ... 64 2e-09
ref|XP_020103186.1| pentatricopeptide repeat-containing protein ... 64 2e-09
dbj|BAD73375.1| pentatricopeptide (PPR) repeat-containing protei... 64 2e-09
ref|XP_015615845.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-09
ref|XP_015615836.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-09
gb|EEC71257.1| hypothetical protein OsI_03237 [Oryza sativa Indi... 64 2e-09
ref|XP_009393287.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-09
gb|AQK97280.1| Pentatricopeptide repeat-containing protein chlor... 64 4e-09
ref|XP_002456122.1| pentatricopeptide repeat-containing protein ... 64 4e-09
>gb|ONK65740.1| uncharacterized protein A4U43_C06F440 [Asparagus officinalis]
Length = 1015
Score = 94.7 bits (234), Expect = 5e-20
Identities = 61/129 (47%), Positives = 75/129 (58%)
Frame = +1
Query: 1 NKSYESESTRNGRRDMPFLRMEQRKTKGNLNGSETVILEKEFNIQGISERRVRSHNDARQ 180
N+SY SE GR D FLR+E R G++ +LEKE Q S R V + ++
Sbjct: 374 NQSYGSEVGSVGRNDQSFLRLEHR------TGNDMDVLEKEIRGQDPSRRHVAFQDKTKK 427
Query: 181 IKKPGSSAIVMQGRSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRM 360
K S A G+S + +LDKV EDRAAF+TFEVFTDV+NRPRVLRM
Sbjct: 428 FAKFDSRA---NGKS----NIRLDKVGGQKIGGVDYEDRAAFRTFEVFTDVRNRPRVLRM 480
Query: 361 EIEERIQKL 387
E+EERIQKL
Sbjct: 481 EMEERIQKL 489
>ref|XP_020269344.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
At1g30610, chloroplastic [Asparagus officinalis]
Length = 1029
Score = 94.7 bits (234), Expect = 5e-20
Identities = 61/129 (47%), Positives = 75/129 (58%)
Frame = +1
Query: 1 NKSYESESTRNGRRDMPFLRMEQRKTKGNLNGSETVILEKEFNIQGISERRVRSHNDARQ 180
N+SY SE GR D FLR+E R G++ +LEKE Q S R V + ++
Sbjct: 374 NQSYGSEVGSVGRNDQSFLRLEHR------TGNDMDVLEKEIRGQDPSRRHVAFQDKTKK 427
Query: 181 IKKPGSSAIVMQGRSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRM 360
K S A G+S + +LDKV EDRAAF+TFEVFTDV+NRPRVLRM
Sbjct: 428 FAKFDSRA---NGKS----NIRLDKVGGQKIGGVDYEDRAAFRTFEVFTDVRNRPRVLRM 480
Query: 361 EIEERIQKL 387
E+EERIQKL
Sbjct: 481 EMEERIQKL 489
>gb|PKU82244.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 737
Score = 74.3 bits (181), Expect = 7e-13
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 13/130 (10%)
Frame = +1
Query: 37 RRDMPFLRMEQRKTKGN-----LNGSETVILE--KEFNIQGISERRVRSHNDARQIKKPG 195
RRD +ME + +GN +N E + KE +G R + H D + +K
Sbjct: 389 RRD----KMEAFEVEGNQHYQAINAKERDLCAPAKEIYRKGSIRRSAKLHGDIIEAEKLN 444
Query: 196 SSAIVMQGRSAKSK------STQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLR 357
S A++ GRS ++ S ++D V+ +E+RAAFKTFEVFTDV+NRPRVLR
Sbjct: 445 SRALISSGRSVRTHAAYPEFSEEVDGVA--------LENRAAFKTFEVFTDVRNRPRVLR 496
Query: 358 MEIEERIQKL 387
ME+EERI+ L
Sbjct: 497 MEMEERIRNL 506
>ref|XP_020679014.1| pentatricopeptide repeat-containing protein At1g30610,
chloroplastic [Dendrobium catenatum]
Length = 1055
Score = 73.2 bits (178), Expect = 2e-12
Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Frame = +1
Query: 118 KEFNIQGISERRVRSHNDARQIKKPGSSAIVMQGRSAKSK------STQLDKVSXXXXXX 279
KE +G R + H D + +K S A++ GRS ++ S ++D V+
Sbjct: 419 KEIYRKGSIRRSAKLHGDIIEAEKLNSRALISSGRSVRTHAAYPEFSEEVDGVA------ 472
Query: 280 XXIEDRAAFKTFEVFTDVQNRPRVLRMEIEERIQKL 387
+E+RAAFKTFEVFTDV+NRPRVLRME+EERI+ L
Sbjct: 473 --LENRAAFKTFEVFTDVRNRPRVLRMEMEERIRNL 506
>ref|XP_010926893.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic [Elaeis guineensis]
Length = 865
Score = 70.9 bits (172), Expect = 1e-11
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +1
Query: 163 HNDARQIKKPGSSAIVMQGRSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNR 342
+ DA + K GS+A M G+ Q DK IEDRAAFKTFEVFTDV+NR
Sbjct: 252 NGDAMEAGKNGSNATKMHGKIY----VQPDKFVQGDTDDIDIEDRAAFKTFEVFTDVRNR 307
Query: 343 PRVLRMEIEERIQKL 387
PRVLRME+EERI +L
Sbjct: 308 PRVLRMEMEERIHEL 322
>ref|XP_020576653.1| pentatricopeptide repeat-containing protein At1g30610,
chloroplastic [Phalaenopsis equestris]
Length = 1025
Score = 70.9 bits (172), Expect = 1e-11
Identities = 42/90 (46%), Positives = 54/90 (60%)
Frame = +1
Query: 118 KEFNIQGISERRVRSHNDARQIKKPGSSAIVMQGRSAKSKSTQLDKVSXXXXXXXXIEDR 297
KE +G R + +D + KP A V GRS ++ D VS +E+R
Sbjct: 395 KELYHKGSIRRSAKFLSDIIEAGKPNRRAPVSSGRSGRTDVAYPD-VSEGEVGGVTLENR 453
Query: 298 AAFKTFEVFTDVQNRPRVLRMEIEERIQKL 387
AAF+TFEVFTDV+NRPRVLRME+EERI+ L
Sbjct: 454 AAFRTFEVFTDVRNRPRVLRMEMEERIRNL 483
>ref|XP_008807161.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic [Phoenix dactylifera]
Length = 865
Score = 70.5 bits (171), Expect = 2e-11
Identities = 36/48 (75%), Positives = 38/48 (79%)
Frame = +1
Query: 244 QLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRMEIEERIQKL 387
Q DKV IEDRAAFKTFEVFTDV+NRPRVLRME+EERIQKL
Sbjct: 275 QSDKVVQSDSDDIDIEDRAAFKTFEVFTDVRNRPRVLRMEVEERIQKL 322
>ref|XP_003566988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic [Brachypodium distachyon]
gb|KQK09159.1| hypothetical protein BRADI_2g46360v3 [Brachypodium distachyon]
Length = 976
Score = 69.3 bits (168), Expect = 4e-11
Identities = 45/102 (44%), Positives = 60/102 (58%)
Frame = +1
Query: 82 GNLNGSETVILEKEFNIQGISERRVRSHNDARQIKKPGSSAIVMQGRSAKSKSTQLDKVS 261
G GS+T + ++Q +SE ++ R + G + R+ K ++ QL K
Sbjct: 339 GRFRGSDTGYSKPTVSMQTVSE----NYGHPRYGLEHGKPETI---RTQKGENVQLGKF- 390
Query: 262 XXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRMEIEERIQKL 387
I+DRAAFKTFEVFTDV+NRPRVL+MEIEERIQKL
Sbjct: 391 VRRDSEAVIDDRAAFKTFEVFTDVRNRPRVLQMEIEERIQKL 432
>gb|OAY74994.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
comosus]
Length = 903
Score = 66.2 bits (160), Expect = 5e-10
Identities = 51/119 (42%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Frame = +1
Query: 58 RMEQRKTK--GNLNGSETVILEKEFNIQGISERRVRSHNDARQIKKPGS-----SAIVMQ 216
R+ RKT G NGS + I E E N ++ + S R +K S +
Sbjct: 265 RVGSRKTDIDGKSNGSNS-IRENEPNRNTLAPKAKISSPVKRTFEKDRDFSHDYSHVGKD 323
Query: 217 G--RSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRMEIEERIQKL 387
G R + KVS EDRAAFKTF+VFTDV+NRPRVLRME+EERIQKL
Sbjct: 324 GAFRVHSEDGARSSKVSLRDMDNGDFEDRAAFKTFKVFTDVRNRPRVLRMEMEERIQKL 382
>gb|PKA62106.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 1011
Score = 66.2 bits (160), Expect = 5e-10
Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Frame = +1
Query: 1 NKSYESESTRNGRRDMPFLRMEQRKTKGNLNGS--ETVILE-------------KEFNIQ 135
+KS SE +D P R + NL E +++E KE +
Sbjct: 325 SKSKTSEFAEIAHKDEPSFRYGKASKLENLREDKVEAIVMEEKNLPGFDFPTSTKEACQK 384
Query: 136 GISERRVRSHNDARQIKKPGSSAIVMQGRSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTF 315
G R + + D + S +V G +K ++ S IEDRAAF+TF
Sbjct: 385 GSRRRNDKFNGDTVESDDLDSGTLVSSGILSK-RNADFPIDSGVDIDGIDIEDRAAFRTF 443
Query: 316 EVFTDVQNRPRVLRMEIEERIQKL 387
E+FTDV+NRPRVLRME+EE+IQ L
Sbjct: 444 EIFTDVRNRPRVLRMELEEKIQNL 467
>dbj|BAF05756.2| Os01g0674700 [Oryza sativa Japonica Group]
Length = 514
Score = 64.3 bits (155), Expect = 2e-09
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +1
Query: 181 IKKPGSSAIVMQGRSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRM 360
+K+ AI MQ + ++ Q K ++DRAAFKTFEVFTDV+NRPRVL+M
Sbjct: 383 LKRGKPEAIRMQ----RGENVQTGKFIRRDAKAIDLDDRAAFKTFEVFTDVRNRPRVLQM 438
Query: 361 EIEERIQKL 387
E+E+RIQKL
Sbjct: 439 ELEDRIQKL 447
>ref|XP_020103187.1| pentatricopeptide repeat-containing protein At1g30610,
chloroplastic isoform X2 [Ananas comosus]
Length = 928
Score = 64.3 bits (155), Expect = 2e-09
Identities = 50/119 (42%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Frame = +1
Query: 58 RMEQRKTK--GNLNGSETVILEKEFNIQGISERRVRSHNDARQIKKPGS-----SAIVMQ 216
R+ RKT G NGS + I E E N ++ + S R +K S +
Sbjct: 274 RVGSRKTDIDGKSNGSNS-IRENEPNRNTLAPKAKISSPVKRTFEKDRDFSHDYSHVGKD 332
Query: 217 G--RSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRMEIEERIQKL 387
G R + KV EDRAAFKTF+VFTDV+NRPRVLRME+EERIQKL
Sbjct: 333 GAFRVHSEDGARSSKVCLRDMDNGDFEDRAAFKTFKVFTDVRNRPRVLRMEMEERIQKL 391
>ref|XP_020103186.1| pentatricopeptide repeat-containing protein At1g30610,
chloroplastic isoform X1 [Ananas comosus]
Length = 943
Score = 64.3 bits (155), Expect = 2e-09
Identities = 50/119 (42%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Frame = +1
Query: 58 RMEQRKTK--GNLNGSETVILEKEFNIQGISERRVRSHNDARQIKKPGS-----SAIVMQ 216
R+ RKT G NGS + I E E N ++ + S R +K S +
Sbjct: 274 RVGSRKTDIDGKSNGSNS-IRENEPNRNTLAPKAKISSPVKRTFEKDRDFSHDYSHVGKD 332
Query: 217 G--RSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRMEIEERIQKL 387
G R + KV EDRAAFKTF+VFTDV+NRPRVLRME+EERIQKL
Sbjct: 333 GAFRVHSEDGARSSKVCLRDMDNGDFEDRAAFKTFKVFTDVRNRPRVLRMEMEERIQKL 391
>dbj|BAD73375.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
dbj|BAD73522.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 988
Score = 64.3 bits (155), Expect = 2e-09
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +1
Query: 181 IKKPGSSAIVMQGRSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRM 360
+K+ AI MQ + ++ Q K ++DRAAFKTFEVFTDV+NRPRVL+M
Sbjct: 383 LKRGKPEAIRMQ----RGENVQTGKFIRRDAKAIDLDDRAAFKTFEVFTDVRNRPRVLQM 438
Query: 361 EIEERIQKL 387
E+E+RIQKL
Sbjct: 439 ELEDRIQKL 447
>ref|XP_015615845.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic isoform X2 [Oryza sativa Japonica Group]
Length = 992
Score = 64.3 bits (155), Expect = 2e-09
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +1
Query: 181 IKKPGSSAIVMQGRSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRM 360
+K+ AI MQ + ++ Q K ++DRAAFKTFEVFTDV+NRPRVL+M
Sbjct: 383 LKRGKPEAIRMQ----RGENVQTGKFIRRDAKAIDLDDRAAFKTFEVFTDVRNRPRVLQM 438
Query: 361 EIEERIQKL 387
E+E+RIQKL
Sbjct: 439 ELEDRIQKL 447
>ref|XP_015615836.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic isoform X1 [Oryza sativa Japonica Group]
gb|EEE55166.1| hypothetical protein OsJ_02981 [Oryza sativa Japonica Group]
dbj|BAS73647.1| Os01g0674700 [Oryza sativa Japonica Group]
Length = 994
Score = 64.3 bits (155), Expect = 2e-09
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +1
Query: 181 IKKPGSSAIVMQGRSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRM 360
+K+ AI MQ + ++ Q K ++DRAAFKTFEVFTDV+NRPRVL+M
Sbjct: 383 LKRGKPEAIRMQ----RGENVQTGKFIRRDAKAIDLDDRAAFKTFEVFTDVRNRPRVLQM 438
Query: 361 EIEERIQKL 387
E+E+RIQKL
Sbjct: 439 ELEDRIQKL 447
>gb|EEC71257.1| hypothetical protein OsI_03237 [Oryza sativa Indica Group]
Length = 994
Score = 64.3 bits (155), Expect = 2e-09
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +1
Query: 181 IKKPGSSAIVMQGRSAKSKSTQLDKVSXXXXXXXXIEDRAAFKTFEVFTDVQNRPRVLRM 360
+K+ AI MQ + ++ Q K ++DRAAFKTFEVFTDV+NRPRVL+M
Sbjct: 383 LKRGKPEAIRMQ----RGENVQTGKFIRRDAKAIDLDDRAAFKTFEVFTDVRNRPRVLQM 438
Query: 361 EIEERIQKL 387
E+E+RIQKL
Sbjct: 439 ELEDRIQKL 447
>ref|XP_009393287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 1105
Score = 63.9 bits (154), Expect = 3e-09
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +1
Query: 289 EDRAAFKTFEVFTDVQNRPRVLRMEIEERIQKL 387
EDRAAFKTFEVFTDV+NRPRVLRME+EERI+KL
Sbjct: 524 EDRAAFKTFEVFTDVRNRPRVLRMEMEERIEKL 556
>gb|AQK97280.1| Pentatricopeptide repeat-containing protein chloroplastic [Zea
mays]
Length = 512
Score = 63.5 bits (153), Expect = 4e-09
Identities = 29/33 (87%), Positives = 33/33 (100%)
Frame = +1
Query: 289 EDRAAFKTFEVFTDVQNRPRVLRMEIEERIQKL 387
+DRAAFKTFEVFTDV+NRPR+LRME+EERIQKL
Sbjct: 379 DDRAAFKTFEVFTDVRNRPRILRMEMEERIQKL 411
>ref|XP_002456122.1| pentatricopeptide repeat-containing protein At1g30610,
chloroplastic [Sorghum bicolor]
gb|EES01242.1| hypothetical protein SORBI_3003G254000 [Sorghum bicolor]
Length = 937
Score = 63.5 bits (153), Expect = 4e-09
Identities = 29/33 (87%), Positives = 33/33 (100%)
Frame = +1
Query: 289 EDRAAFKTFEVFTDVQNRPRVLRMEIEERIQKL 387
+DRAAFKTFEVFTDV+NRPR+LRME+EERIQKL
Sbjct: 362 DDRAAFKTFEVFTDVRNRPRILRMEMEERIQKL 394