BLASTX nr result

ID: Ophiopogon24_contig00023768 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00023768
         (449 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020270030.1| cell wall protein DAN4-like [Asparagus offic...    91   2e-19
gb|ONK65878.1| uncharacterized protein A4U43_C06F1900 [Asparagus...    91   2e-18

>ref|XP_020270030.1| cell wall protein DAN4-like [Asparagus officinalis]
          Length = 242

 Score = 90.5 bits (223), Expect = 2e-19
 Identities = 61/129 (47%), Positives = 71/129 (55%)
 Frame = +2

Query: 2   KVDCVSQTPLDNETASELKRCSTDQTPPDNETASEQKLGSKSQISLVNETVKETMLVSTS 181
           K    SQ    +ET SELK   T Q    NET SE K GS  Q + VNETV E  L S+S
Sbjct: 118 KPSSTSQPIPVSETPSELKPDPTGQPTTVNETPSELKQGSMDQATPVNETVGELKLDSSS 177

Query: 182 QISPEPHGPAPASEPDSKNAEIQNDADQVKSGASAAGTQPLTSQTSSEVLQETKANPVGN 361
           QISPEP      S+  S  AE QND+DQ+K  ASAA      + T   + QE + NPVGN
Sbjct: 178 QISPEPR-----SDLGSDKAEAQNDSDQIKFSASAAAA-AAAAATQGLISQEVETNPVGN 231

Query: 362 GSSPMQSSG 388
             SP+  SG
Sbjct: 232 EGSPVPFSG 240


>gb|ONK65878.1| uncharacterized protein A4U43_C06F1900 [Asparagus officinalis]
          Length = 377

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 61/129 (47%), Positives = 71/129 (55%)
 Frame = +2

Query: 2   KVDCVSQTPLDNETASELKRCSTDQTPPDNETASEQKLGSKSQISLVNETVKETMLVSTS 181
           K    SQ    +ET SELK   T Q    NET SE K GS  Q + VNETV E  L S+S
Sbjct: 253 KPSSTSQPIPVSETPSELKPDPTGQPTTVNETPSELKQGSMDQATPVNETVGELKLDSSS 312

Query: 182 QISPEPHGPAPASEPDSKNAEIQNDADQVKSGASAAGTQPLTSQTSSEVLQETKANPVGN 361
           QISPEP      S+  S  AE QND+DQ+K  ASAA      + T   + QE + NPVGN
Sbjct: 313 QISPEPR-----SDLGSDKAEAQNDSDQIKFSASAAAA-AAAAATQGLISQEVETNPVGN 366

Query: 362 GSSPMQSSG 388
             SP+  SG
Sbjct: 367 EGSPVPFSG 375


Top