BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00023706
         (391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020247372.1| uncharacterized protein LOC109825063 isoform...   129   1e-33
ref|XP_020247365.1| uncharacterized protein LOC109825063 isoform...   129   2e-33
gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposo...   109   4e-25
gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposo...   109   4e-25
gb|EEC80481.1| hypothetical protein OsI_22711 [Oryza sativa Indi...   103   7e-24
gb|KYP59031.1| Retrovirus-related Pol polyprotein from transposo...   105   8e-24
gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]     105   1e-23
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     104   2e-23
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc...   104   2e-23
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   104   2e-23
gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subc...   104   2e-23
gb|AAX96223.1| retrotransposon protein, putative, Ty1-copia sub-...   104   2e-23
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         104   2e-23
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   104   2e-23
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   104   2e-23
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap...   104   2e-23
gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japo...   104   2e-23
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   104   2e-23
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...   104   2e-23
emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group] >g...   104   2e-23

>ref|XP_020247372.1| uncharacterized protein LOC109825063 isoform X2 [Asparagus
           officinalis]
 ref|XP_020247378.1| uncharacterized protein LOC109825063 isoform X2 [Asparagus
           officinalis]
          Length = 358

 Score =  129 bits (325), Expect = 1e-33
 Identities = 61/94 (64%), Positives = 71/94 (75%), Gaps = 3/94 (3%)
 Frame = -1

Query: 379 SHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNG---TPKVNMIEGNPNSFRLASS 209
           S KS+ KFCYVCGR+NHL+ QCYYRKK P K    G G   + +VNM+E N +SFRLASS
Sbjct: 265 SQKSETKFCYVCGRTNHLSTQCYYRKKAPIKTHVGGKGEEASHRVNMVENNSDSFRLASS 324

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQ 107
             +VN  T S DWWLDSGANIH+ +DRSWFSTYQ
Sbjct: 325 SYVVNCTTFSDDWWLDSGANIHISSDRSWFSTYQ 358


>ref|XP_020247365.1| uncharacterized protein LOC109825063 isoform X1 [Asparagus
           officinalis]
          Length = 380

 Score =  129 bits (325), Expect = 2e-33
 Identities = 61/94 (64%), Positives = 71/94 (75%), Gaps = 3/94 (3%)
 Frame = -1

Query: 379 SHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNG---TPKVNMIEGNPNSFRLASS 209
           S KS+ KFCYVCGR+NHL+ QCYYRKK P K    G G   + +VNM+E N +SFRLASS
Sbjct: 287 SQKSETKFCYVCGRTNHLSTQCYYRKKAPIKTHVGGKGEEASHRVNMVENNSDSFRLASS 346

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQ 107
             +VN  T S DWWLDSGANIH+ +DRSWFSTYQ
Sbjct: 347 SYVVNCTTFSDDWWLDSGANIHISSDRSWFSTYQ 380


>gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 714

 Score =  109 bits (272), Expect = 4e-25
 Identities = 51/133 (38%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
 Frame = -1

Query: 382 SSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPA--PKGNGTPKVNMIEGNPNSF----R 221
           S  + +  FC+VCGR+NH A  C++R+++P      PK +  P+ N+I  N +S     R
Sbjct: 140 SKIQGNESFCFVCGRNNHFAKDCFHRRRQPKDITSDPKSSSQPQANVITANASSDSPSNR 199

Query: 220 LASSLPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGS 41
              + P +N + +S DWW+DSGAN+HVC D+  FS+YQE    ++S+ + S  +++G G 
Sbjct: 200 YHVTSPELNFIYNSNDWWIDSGANVHVCADKKLFSSYQECGTRTVSMGNGSLARVIGLGR 259

Query: 40  IELNMTSGKALNL 2
           +EL ++SG  L L
Sbjct: 260 VELELSSGNCLVL 272


>gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 880

 Score =  109 bits (272), Expect = 4e-25
 Identities = 51/133 (38%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
 Frame = -1

Query: 382 SSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPA--PKGNGTPKVNMIEGNPNSF----R 221
           S  + +  FC+VCGR+NH A  C++R+++P      PK +  P+ N+I  N +S     R
Sbjct: 142 SKIQGNESFCFVCGRNNHFAKDCFHRRRQPKDITSDPKSSSQPQANVITANASSDSPSNR 201

Query: 220 LASSLPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGS 41
              + P +N + +S DWW+DSGAN+HVC D+  FS+YQE    ++S+ + S  +++G G 
Sbjct: 202 YHVTSPELNFIYNSNDWWIDSGANVHVCADKKLFSSYQECGTRTVSMGNGSLARVIGLGR 261

Query: 40  IELNMTSGKALNL 2
           +EL ++SG  L L
Sbjct: 262 VELELSSGNCLVL 274


>gb|EEC80481.1| hypothetical protein OsI_22711 [Oryza sativa Indica Group]
          Length = 360

 Score =  103 bits (258), Expect = 7e-24
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 101 NNNNPNQDERTCFVCGQPGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 157

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP + SV  ST+WW+D+GANIHVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 158 LPTIFSVNQSTNWWVDTGANIHVCADISLFSSYQVARGSTVLMGNGSHLYVHGVGTVDLK 217

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 218 FTSGKIVQL 226


>gb|KYP59031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 489

 Score =  105 bits (261), Expect = 8e-24
 Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
 Frame = -1

Query: 382 SSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPA--PKGNGTPKVNMIEGNPNSF----R 221
           S  + +  FC+VCGR+NH A  C++R+++P      PK +  P+ N+I  N +S     R
Sbjct: 142 SKIQGNESFCFVCGRNNHFAKDCFHRRRQPKDITSDPKSSSQPQDNVITANASSDSPSNR 201

Query: 220 LASSLPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGS 41
              + P +N + +S DWW+DSGAN+HVC D+  FS+YQE    ++S+ + S  +++G G 
Sbjct: 202 YHVTSPELNFIYNSNDWWIDSGANVHVCADKKLFSSYQECGTRTVSMGNGSLARVIGLGR 261

Query: 40  IELNMTSGKALNL 2
           +EL ++S   L L
Sbjct: 262 VELELSSRNCLVL 274


>gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1861

 Score =  105 bits (261), Expect = 1e-23
 Identities = 52/129 (40%), Positives = 76/129 (58%)
 Frame = -1

Query: 388  NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
            N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 645  NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 701

Query: 208  LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
            LP V SV  ST+WW+D+GANIHVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 702  LPTVFSVNQSTNWWIDTGANIHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 761

Query: 28   MTSGKALNL 2
             TSGK + L
Sbjct: 762  FTSGKIVQL 770


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  104 bits (260), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCSQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356


>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1151

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 102 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 158

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 159 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 218

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 219 FTSGKIVQL 227


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 192 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 248

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 249 LPAVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 308

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 309 FTSGKIVQL 317


>gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1302

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356


>gb|AAX96223.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
 gb|ABA92679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1302

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356


>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356


>gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356


>emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group]
 emb|CAD41412.2| OSJNBb0078D11.12 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  104 bits (259), Expect = 2e-23
 Identities = 51/129 (39%), Positives = 76/129 (58%)
 Frame = -1

Query: 388 NSSSHKSDGKFCYVCGRSNHLAPQCYYRKKEPAKPAPKGNGTPKVNMIEGNPNSFRLASS 209
           N+++   D + C+VCG+  HLA +C  RK      AP G  +   N+  GN        +
Sbjct: 231 NNNNPNQDERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGN 287

Query: 208 LPLVNSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELN 29
           LP V SV  ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L 
Sbjct: 288 LPTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLK 347

Query: 28  MTSGKALNL 2
            TSGK + L
Sbjct: 348 FTSGKIVQL 356