BLASTX nr result

ID: Ophiopogon24_contig00023611 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00023611
         (642 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020261714.1| protein farnesyltransferase subunit beta [As...    59   1e-06
ref|XP_019701967.1| PREDICTED: protein farnesyltransferase subun...    58   3e-06
ref|XP_010925465.1| PREDICTED: protein farnesyltransferase subun...    58   3e-06
ref|XP_020106260.1| protein farnesyltransferase subunit beta iso...    58   3e-06
ref|XP_019701961.1| PREDICTED: protein farnesyltransferase subun...    58   3e-06
ref|XP_009415273.1| PREDICTED: protein farnesyltransferase subun...    58   3e-06
ref|XP_009392402.1| PREDICTED: protein farnesyltransferase subun...    57   6e-06
ref|XP_009392401.1| PREDICTED: protein farnesyltransferase subun...    57   6e-06

>ref|XP_020261714.1| protein farnesyltransferase subunit beta [Asparagus officinalis]
 gb|ONK72736.1| uncharacterized protein A4U43_C04F22640 [Asparagus officinalis]
          Length = 460

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 104 HMKKACMELWRDKHIKFLTRGLRLLGPSYHVLDA 3
           H +   MEL RDKHI+FLTRGLRLLGPSYHVLDA
Sbjct: 43  HTRSLIMELQRDKHIEFLTRGLRLLGPSYHVLDA 76


>ref|XP_019701967.1| PREDICTED: protein farnesyltransferase subunit beta isoform X3
           [Elaeis guineensis]
          Length = 453

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 HMKKACMELWRDKHIKFLTRGLRLLGPSYHVLDA 3
           H +    ELWRDKH++FLTRGL+ LGPSYHVLDA
Sbjct: 58  HARSLMSELWRDKHVEFLTRGLKQLGPSYHVLDA 91


>ref|XP_010925465.1| PREDICTED: protein farnesyltransferase subunit beta isoform X2
           [Elaeis guineensis]
          Length = 454

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 HMKKACMELWRDKHIKFLTRGLRLLGPSYHVLDA 3
           H +    ELWRDKH++FLTRGL+ LGPSYHVLDA
Sbjct: 58  HARSLMSELWRDKHVEFLTRGLKQLGPSYHVLDA 91


>ref|XP_020106260.1| protein farnesyltransferase subunit beta isoform X1 [Ananas
           comosus]
          Length = 455

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = -2

Query: 104 HMKKACMELWRDKHIKFLTRGLRLLGPSYHVLDA 3
           H +   +ELWRDKH+++L+RGLRLLGPS+HVLDA
Sbjct: 56  HTQSLMLELWRDKHVEYLSRGLRLLGPSFHVLDA 89


>ref|XP_019701961.1| PREDICTED: protein farnesyltransferase subunit beta isoform X1
           [Elaeis guineensis]
          Length = 461

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 HMKKACMELWRDKHIKFLTRGLRLLGPSYHVLDA 3
           H +    ELWRDKH++FLTRGL+ LGPSYHVLDA
Sbjct: 58  HARSLMSELWRDKHVEFLTRGLKQLGPSYHVLDA 91


>ref|XP_009415273.1| PREDICTED: protein farnesyltransferase subunit beta-like [Musa
           acuminata subsp. malaccensis]
          Length = 523

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = -2

Query: 104 HMKKACMELWRDKHIKFLTRGLRLLGPSYHVLDA 3
           H +   +ELWRDKHI+FLTRGL+ LGP+YHVLDA
Sbjct: 111 HTRSFTLELWRDKHIEFLTRGLKQLGPNYHVLDA 144


>ref|XP_009392402.1| PREDICTED: protein farnesyltransferase subunit beta isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 452

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 HMKKACMELWRDKHIKFLTRGLRLLGPSYHVLDA 3
           H +   +ELWRD HI+FLTRGL LLGPSYHVLDA
Sbjct: 68  HTQSFMLELWRDTHIEFLTRGLGLLGPSYHVLDA 101


>ref|XP_009392401.1| PREDICTED: protein farnesyltransferase subunit beta isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 479

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 HMKKACMELWRDKHIKFLTRGLRLLGPSYHVLDA 3
           H +   +ELWRD HI+FLTRGL LLGPSYHVLDA
Sbjct: 68  HTQSFMLELWRDTHIEFLTRGLGLLGPSYHVLDA 101


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