BLASTX nr result

ID: Ophiopogon24_contig00023571 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00023571
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241385.1| methyl-CpG-binding domain-containing protein...    56   3e-06
gb|ONK79687.1| uncharacterized protein A4U43_C01F9020 [Asparagus...    54   1e-05

>ref|XP_020241385.1| methyl-CpG-binding domain-containing protein 13 [Asparagus
           officinalis]
          Length = 673

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
 Frame = -2

Query: 366 AATDNQDFDLAKLLGPVELPKTQNLPVN-DEGKACPLEIGLPSRS--EASRARG 214
           + ++NQ  D  KL+GP ELPK  +  VN DEGK+C LE G+PS+S  EASR RG
Sbjct: 620 STSNNQGLDTGKLVGPEELPKELHFSVNNDEGKSCSLENGMPSKSNAEASRVRG 673


>gb|ONK79687.1| uncharacterized protein A4U43_C01F9020 [Asparagus officinalis]
          Length = 831

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = -2

Query: 366 AATDNQDFDLAKLLGPVELPKTQNLPVN-DEGKACPLEIGLPSRS--EASRARGSTSRVQ 196
           + ++NQ  D  KL+GP ELPK  +  VN DEGK+C LE G+PS+S  EASR R   SRV+
Sbjct: 685 STSNNQGLDTGKLVGPEELPKELHFSVNNDEGKSCSLENGMPSKSNAEASRVR-EASRVR 743


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