BLASTX nr result

ID: Ophiopogon24_contig00023499 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00023499
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269136.1| zinc finger CCCH domain-containing protein 4...    63   1e-08
gb|PKA62170.1| Zinc finger CCCH domain-containing protein 45 [Ap...    56   3e-06
ref|XP_020686552.1| zinc finger CCCH domain-containing protein 4...    55   5e-06
gb|PKU73321.1| Zinc finger CCCH domain-containing protein 45 [De...    55   5e-06
ref|XP_006846022.1| 30-kDa cleavage and polyadenylation specific...    55   5e-06
ref|XP_020686551.1| zinc finger CCCH domain-containing protein 4...    55   5e-06
ref|XP_020588276.1| zinc finger CCCH domain-containing protein 4...    55   5e-06

>ref|XP_020269136.1| zinc finger CCCH domain-containing protein 45 [Asparagus
           officinalis]
 gb|ONK65709.1| uncharacterized protein A4U43_C06F130 [Asparagus officinalis]
          Length = 603

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = +3

Query: 3   SESEDEAAPRRSRYGDG-KKKRRESDGETGSDQWETPVTE 119
           SESEDEAAPRRSRYG+G KKKR ES+ E GS+QWETP  E
Sbjct: 560 SESEDEAAPRRSRYGEGSKKKRWESEAEAGSEQWETPGPE 599


>gb|PKA62170.1| Zinc finger CCCH domain-containing protein 45 [Apostasia
           shenzhenica]
          Length = 718

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   SESEDEAAPRRSRYGDGKKKRRESDGETGSDQWETPVTEV 122
           SES+DEAAPRRSR+GD  KKRR S+GE  ++ WETP++EV
Sbjct: 677 SESDDEAAPRRSRHGD-SKKRRVSEGEGVAEHWETPLSEV 715


>ref|XP_020686552.1| zinc finger CCCH domain-containing protein 45 isoform X2
           [Dendrobium catenatum]
          Length = 684

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +3

Query: 3   SESEDEAAPRRSRYGDGKKKRRESDGETGSDQWETPVTE 119
           SESEDE APRRSR+G+  KKRR S+GE  +D WE P  E
Sbjct: 642 SESEDEPAPRRSRHGENSKKRRGSEGEPVADHWEAPFIE 680


>gb|PKU73321.1| Zinc finger CCCH domain-containing protein 45 [Dendrobium
           catenatum]
          Length = 690

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +3

Query: 3   SESEDEAAPRRSRYGDGKKKRRESDGETGSDQWETPVTE 119
           SESEDE APRRSR+G+  KKRR S+GE  +D WE P  E
Sbjct: 648 SESEDEPAPRRSRHGENSKKRRGSEGEPVADHWEAPFIE 686


>ref|XP_006846022.1| 30-kDa cleavage and polyadenylation specificity factor 30
           [Amborella trichopoda]
 gb|ERN07697.1| hypothetical protein AMTR_s00155p00079840 [Amborella trichopoda]
          Length = 701

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/40 (70%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = +3

Query: 3   SESEDEAAPRRSRYGDGKKKRRESDGE-TGSDQWETPVTE 119
           SESEDEA PRRSR+G+G+KKRRE DGE   SD WE P++E
Sbjct: 659 SESEDEA-PRRSRHGEGRKKRREPDGEGEASDHWEMPLSE 697


>ref|XP_020686551.1| zinc finger CCCH domain-containing protein 45 isoform X1
           [Dendrobium catenatum]
          Length = 713

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +3

Query: 3   SESEDEAAPRRSRYGDGKKKRRESDGETGSDQWETPVTE 119
           SESEDE APRRSR+G+  KKRR S+GE  +D WE P  E
Sbjct: 671 SESEDEPAPRRSRHGENSKKRRGSEGEPVADHWEAPFIE 709


>ref|XP_020588276.1| zinc finger CCCH domain-containing protein 45 [Phalaenopsis
           equestris]
          Length = 713

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +3

Query: 3   SESEDEAAPRRSRYGDGKKKRRESDGETGSDQWETPVTE 119
           SESEDEAAPRRSR+G+  KKRR S+G+  +D WE P TE
Sbjct: 672 SESEDEAAPRRSRHGE-SKKRRGSEGDVAADHWEAPFTE 709


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