BLASTX nr result

ID: Ophiopogon24_contig00023283 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00023283
         (453 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020260622.1| protein ROS1-like isoform X2 [Asparagus offi...   112   1e-25
ref|XP_020260621.1| protein ROS1-like isoform X1 [Asparagus offi...   112   1e-25
ref|XP_020247935.1| transcriptional activator DEMETER-like [Aspa...   102   2e-22

>ref|XP_020260622.1| protein ROS1-like isoform X2 [Asparagus officinalis]
          Length = 1721

 Score =  112 bits (279), Expect = 1e-25
 Identities = 66/140 (47%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
 Frame = +1

Query: 34  PHEIIDLDLIDETTSYQDLLRNESNKLPQPVADMPVEQCFXXXXXXXXXXXXXHHEDERN 213
           PHE+IDLDL DETTS+QDLL N S +     A+ P EQ F             +  +ERN
Sbjct: 202 PHEVIDLDLNDETTSFQDLLMNGSGRFSPFAAEKPAEQSFSNQVDCSQVVTSQNQLEERN 261

Query: 214 VALNSSEEVAVQQAEGENQGIDLNXXXXXXXXXXXXXXXVIREG-XXXXXXXXXXXXXXX 390
           V  NSSEE  VQQA+GENQGIDLN               VIREG                
Sbjct: 262 VVANSSEETIVQQADGENQGIDLNKTPQNKPKRRKYTPKVIREGKPARAPRKPATPKPPK 321

Query: 391 XXENPSGKRKYVRKNKDANP 450
             ENPSGKRKYVRKNK  +P
Sbjct: 322 SVENPSGKRKYVRKNKGESP 341


>ref|XP_020260621.1| protein ROS1-like isoform X1 [Asparagus officinalis]
 gb|ONK71531.1| uncharacterized protein A4U43_C04F9600 [Asparagus officinalis]
          Length = 1722

 Score =  112 bits (279), Expect = 1e-25
 Identities = 66/140 (47%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
 Frame = +1

Query: 34  PHEIIDLDLIDETTSYQDLLRNESNKLPQPVADMPVEQCFXXXXXXXXXXXXXHHEDERN 213
           PHE+IDLDL DETTS+QDLL N S +     A+ P EQ F             +  +ERN
Sbjct: 202 PHEVIDLDLNDETTSFQDLLMNGSGRFSPFAAEKPAEQSFSNQVDCSQVVTSQNQLEERN 261

Query: 214 VALNSSEEVAVQQAEGENQGIDLNXXXXXXXXXXXXXXXVIREG-XXXXXXXXXXXXXXX 390
           V  NSSEE  VQQA+GENQGIDLN               VIREG                
Sbjct: 262 VVANSSEETIVQQADGENQGIDLNKTPQNKPKRRKYTPKVIREGKPARAPRKPATPKPPK 321

Query: 391 XXENPSGKRKYVRKNKDANP 450
             ENPSGKRKYVRKNK  +P
Sbjct: 322 SVENPSGKRKYVRKNKGESP 341


>ref|XP_020247935.1| transcriptional activator DEMETER-like [Asparagus officinalis]
 ref|XP_020247936.1| transcriptional activator DEMETER-like [Asparagus officinalis]
 ref|XP_020247937.1| transcriptional activator DEMETER-like [Asparagus officinalis]
 gb|ONK56964.1| uncharacterized protein A4U43_C10F15150 [Asparagus officinalis]
          Length = 1741

 Score =  102 bits (255), Expect = 2e-22
 Identities = 66/160 (41%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
 Frame = +1

Query: 1   KNQREWIPEQMPHEIIDLDLIDETTSYQDLLRNESNKLPQPVADMP--------VEQCFX 156
           KNQR+ I + +P EIIDLD IDE TS+ DLLR +S K P+ + D+          +    
Sbjct: 131 KNQRQRIQDHLPCEIIDLDPIDEPTSFHDLLRKKSEK-PREIIDLDSVDEPTASYQDLLW 189

Query: 157 XXXXXXXXXXXXHHEDERNVALNSSEEVAVQQAEGENQGIDLNXXXXXXXXXXXXXXXVI 336
                        ++ ERN+ LNS+EEV VQQAEG+NQGIDLN               VI
Sbjct: 190 NECGKVQQEQCVFNQGERNMVLNSAEEVIVQQAEGDNQGIDLNKTPPPKTRRKKYTPKVI 249

Query: 337 REG-XXXXXXXXXXXXXXXXXENPSGKRKYVRKNKDANPQ 453
           REG                  EN +GKRKYVRK KD +PQ
Sbjct: 250 REGKPARTPKKPATPKPPMTAENAAGKRKYVRKKKDGSPQ 289


Top