BLASTX nr result
ID: Ophiopogon24_contig00023207
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00023207
(394 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAQ80439.1| putative RNA recognition motif containing protei... 69 4e-11
gb|OVA13223.1| RNA recognition motif domain [Macleaya cordata] 69 6e-11
ref|XP_010254909.1| PREDICTED: splicing factor U2af large subuni... 69 8e-11
ref|XP_010244305.1| PREDICTED: splicing factor U2af large subuni... 67 4e-10
ref|XP_010244304.1| PREDICTED: splicing factor U2af large subuni... 67 4e-10
ref|XP_004293510.1| PREDICTED: splicing factor U2af large subuni... 66 7e-10
ref|XP_011460245.1| PREDICTED: splicing factor U2af large subuni... 66 7e-10
ref|XP_011460244.1| PREDICTED: splicing factor U2af large subuni... 66 7e-10
ref|XP_010095280.1| splicing factor U2af large subunit B isoform... 66 7e-10
ref|XP_024199493.1| splicing factor U2af large subunit B-like is... 65 9e-10
ref|XP_024199492.1| splicing factor U2af large subunit B-like is... 65 9e-10
ref|XP_021824137.1| splicing factor U2af large subunit B isoform... 65 1e-09
ref|XP_020423198.1| splicing factor U2af large subunit B isoform... 65 1e-09
ref|XP_020241585.1| splicing factor U2af large subunit A-like is... 65 2e-09
ref|XP_007213839.2| splicing factor U2af large subunit B isoform... 65 2e-09
ref|XP_008225057.1| PREDICTED: splicing factor U2af large subuni... 65 2e-09
ref|XP_021825849.1| splicing factor U2af large subunit B-like is... 65 2e-09
ref|XP_020241577.1| splicing factor U2af large subunit A-like is... 65 2e-09
gb|KDO79502.1| hypothetical protein CISIN_1g009052mg [Citrus sin... 65 2e-09
ref|XP_023893143.1| splicing factor U2af large subunit B-like [Q... 65 2e-09
>dbj|GAQ80439.1| putative RNA recognition motif containing protein [Klebsormidium
nitens]
Length = 498
Score = 69.3 bits (168), Expect = 4e-11
Identities = 39/67 (58%), Positives = 43/67 (64%), Gaps = 15/67 (22%)
Frame = +3
Query: 237 SGFDMAPPASAQTVL--------------FPGLPAL-VLSMTQQATRHARRVYVGGLPPA 371
SGFDMAPPA A FPG P + V +MTQQATRHARRVYVGGLPP
Sbjct: 99 SGFDMAPPAVAAPPTAGADAGGAVYPFGQFPGFPQIPVAAMTQQATRHARRVYVGGLPPM 158
Query: 372 ANEQTIA 392
ANEQ++A
Sbjct: 159 ANEQSVA 165
>gb|OVA13223.1| RNA recognition motif domain [Macleaya cordata]
Length = 537
Score = 68.9 bits (167), Expect = 6e-11
Identities = 39/74 (52%), Positives = 43/74 (58%), Gaps = 22/74 (29%)
Frame = +3
Query: 237 SGFDMAPPASAQTVLFPGLPAL----------------------VLSMTQQATRHARRVY 350
SGFDMAPP++A PG+P + SMTQQATRHARRVY
Sbjct: 134 SGFDMAPPSTAVPGQLPGVPQIPEMFPNMFPFGSTQFGALQLMPAQSMTQQATRHARRVY 193
Query: 351 VGGLPPAANEQTIA 392
VGGLPP ANEQTIA
Sbjct: 194 VGGLPPLANEQTIA 207
>ref|XP_010254909.1| PREDICTED: splicing factor U2af large subunit B isoform X1 [Nelumbo
nucifera]
Length = 559
Score = 68.6 bits (166), Expect = 8e-11
Identities = 50/135 (37%), Positives = 59/135 (43%), Gaps = 25/135 (18%)
Frame = +3
Query: 63 HDRHRDYDRNGEARPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISG 242
HDR RDYDR+ E R ISG
Sbjct: 122 HDRRRDYDRDREGR--------------RRHRSQSRSQGRSDHRSRSRSRSRSKSKRISG 167
Query: 243 FDMAPPASAQTV-------------------LFP-----GLPAL-VLSMTQQATRHARRV 347
FDMAPP++A V +FP G+P + V +MTQQATRHARRV
Sbjct: 168 FDMAPPSTAMLVAAAGQVPGTTPAIPGMFPNMFPLPGQFGVPVMPVQAMTQQATRHARRV 227
Query: 348 YVGGLPPAANEQTIA 392
YVGGLPP ANEQ++A
Sbjct: 228 YVGGLPPTANEQSVA 242
>ref|XP_010244305.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Nelumbo nucifera]
Length = 467
Score = 66.6 bits (161), Expect = 4e-10
Identities = 40/79 (50%), Positives = 47/79 (59%), Gaps = 26/79 (32%)
Frame = +3
Query: 234 ISGFDMAPPASAQTV--------------------LFP-----GLPAL-VLSMTQQATRH 335
ISGFDMAPPA+A +FP G+P + V +MTQQATRH
Sbjct: 72 ISGFDMAPPATAMLAAAAAGQMPGTTPTIPGMFPNMFPLPGQFGVPVMPVQAMTQQATRH 131
Query: 336 ARRVYVGGLPPAANEQTIA 392
ARRVYVGGLPP ANEQ++A
Sbjct: 132 ARRVYVGGLPPTANEQSVA 150
>ref|XP_010244304.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Nelumbo nucifera]
Length = 563
Score = 66.6 bits (161), Expect = 4e-10
Identities = 40/79 (50%), Positives = 47/79 (59%), Gaps = 26/79 (32%)
Frame = +3
Query: 234 ISGFDMAPPASAQTV--------------------LFP-----GLPAL-VLSMTQQATRH 335
ISGFDMAPPA+A +FP G+P + V +MTQQATRH
Sbjct: 168 ISGFDMAPPATAMLAAAAAGQMPGTTPTIPGMFPNMFPLPGQFGVPVMPVQAMTQQATRH 227
Query: 336 ARRVYVGGLPPAANEQTIA 392
ARRVYVGGLPP ANEQ++A
Sbjct: 228 ARRVYVGGLPPTANEQSVA 246
>ref|XP_004293510.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Fragaria vesca subsp. vesca]
Length = 523
Score = 65.9 bits (159), Expect = 7e-10
Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 24/76 (31%)
Frame = +3
Query: 237 SGFDMAPPASA------------------QTVL-----FPGLPAL-VLSMTQQATRHARR 344
SGFDMAPPA A Q V+ +P LP + +MTQQATRHARR
Sbjct: 117 SGFDMAPPAGAVLPSAASSGFPQTMPGVVQNVMSFGTAYPTLPMMPAQAMTQQATRHARR 176
Query: 345 VYVGGLPPAANEQTIA 392
VYVGGLPP ANEQTIA
Sbjct: 177 VYVGGLPPLANEQTIA 192
>ref|XP_011460245.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Fragaria vesca subsp. vesca]
Length = 527
Score = 65.9 bits (159), Expect = 7e-10
Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 24/76 (31%)
Frame = +3
Query: 237 SGFDMAPPASA------------------QTVL-----FPGLPAL-VLSMTQQATRHARR 344
SGFDMAPPA A Q V+ +P LP + +MTQQATRHARR
Sbjct: 117 SGFDMAPPAGAVLPSAASSGFPQTMPGVVQNVMSFGTAYPTLPMMPAQAMTQQATRHARR 176
Query: 345 VYVGGLPPAANEQTIA 392
VYVGGLPP ANEQTIA
Sbjct: 177 VYVGGLPPLANEQTIA 192
>ref|XP_011460244.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Fragaria vesca subsp. vesca]
Length = 528
Score = 65.9 bits (159), Expect = 7e-10
Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 24/76 (31%)
Frame = +3
Query: 237 SGFDMAPPASA------------------QTVL-----FPGLPAL-VLSMTQQATRHARR 344
SGFDMAPPA A Q V+ +P LP + +MTQQATRHARR
Sbjct: 117 SGFDMAPPAGAVLPSAASSGFPQTMPGVVQNVMSFGTAYPTLPMMPAQAMTQQATRHARR 176
Query: 345 VYVGGLPPAANEQTIA 392
VYVGGLPP ANEQTIA
Sbjct: 177 VYVGGLPPLANEQTIA 192
>ref|XP_010095280.1| splicing factor U2af large subunit B isoform X1 [Morus notabilis]
gb|EXB59126.1| Splicing factor U2af large subunit B [Morus notabilis]
Length = 599
Score = 65.9 bits (159), Expect = 7e-10
Identities = 42/84 (50%), Positives = 46/84 (54%), Gaps = 31/84 (36%)
Frame = +3
Query: 234 ISGFDMAPPASAQ---------------TVLFPG---------------LPAL-VLSMTQ 320
ISGFDMAPPASA T PG LP + V +MTQ
Sbjct: 197 ISGFDMAPPASAMLAGAAAAAAAGQIPGTTTMPGMFPNMFPLATGQFGALPVMPVQAMTQ 256
Query: 321 QATRHARRVYVGGLPPAANEQTIA 392
QATRHARRVYVGGLPP ANEQ++A
Sbjct: 257 QATRHARRVYVGGLPPTANEQSVA 280
>ref|XP_024199493.1| splicing factor U2af large subunit B-like isoform X2 [Rosa
chinensis]
Length = 570
Score = 65.5 bits (158), Expect = 9e-10
Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 24/76 (31%)
Frame = +3
Query: 237 SGFDMAPPASA------------------QTVL-----FPGLPAL-VLSMTQQATRHARR 344
SGFDMAPPA A Q V+ +P LP + +MTQQATRHARR
Sbjct: 159 SGFDMAPPAGAVLPTAAASGIPQTMPGVVQNVVPFGTAYPTLPMMPAQAMTQQATRHARR 218
Query: 345 VYVGGLPPAANEQTIA 392
VYVGGLPP ANEQTIA
Sbjct: 219 VYVGGLPPLANEQTIA 234
>ref|XP_024199492.1| splicing factor U2af large subunit B-like isoform X1 [Rosa
chinensis]
gb|PRQ28905.1| putative U2 snRNP auxilliary factor, large subunit, splicing factor
[Rosa chinensis]
Length = 571
Score = 65.5 bits (158), Expect = 9e-10
Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 24/76 (31%)
Frame = +3
Query: 237 SGFDMAPPASA------------------QTVL-----FPGLPAL-VLSMTQQATRHARR 344
SGFDMAPPA A Q V+ +P LP + +MTQQATRHARR
Sbjct: 159 SGFDMAPPAGAVLPTAAASGIPQTMPGVVQNVVPFGTAYPTLPMMPAQAMTQQATRHARR 218
Query: 345 VYVGGLPPAANEQTIA 392
VYVGGLPP ANEQTIA
Sbjct: 219 VYVGGLPPLANEQTIA 234
>ref|XP_021824137.1| splicing factor U2af large subunit B isoform X3 [Prunus avium]
ref|XP_021824138.1| splicing factor U2af large subunit B isoform X4 [Prunus avium]
Length = 600
Score = 65.1 bits (157), Expect = 1e-09
Identities = 41/84 (48%), Positives = 45/84 (53%), Gaps = 31/84 (36%)
Frame = +3
Query: 234 ISGFDMAPPASAQ------------------------------TVLFPGLPAL-VLSMTQ 320
ISGFDMAPPASA T F LP + V +MTQ
Sbjct: 198 ISGFDMAPPASAMLAGAAVAAAGQIPGTSPTIPGMFPNMFPLATGQFGSLPVMPVQAMTQ 257
Query: 321 QATRHARRVYVGGLPPAANEQTIA 392
QATRHARRVYVGGLPP ANEQ++A
Sbjct: 258 QATRHARRVYVGGLPPTANEQSVA 281
>ref|XP_020423198.1| splicing factor U2af large subunit B isoform X2 [Prunus persica]
Length = 600
Score = 65.1 bits (157), Expect = 1e-09
Identities = 41/84 (48%), Positives = 45/84 (53%), Gaps = 31/84 (36%)
Frame = +3
Query: 234 ISGFDMAPPASAQ------------------------------TVLFPGLPAL-VLSMTQ 320
ISGFDMAPPASA T F LP + V +MTQ
Sbjct: 198 ISGFDMAPPASAMLAGAAVAAAGQIPGTSPTIPGMFPNMFPLATGQFGSLPVMPVQAMTQ 257
Query: 321 QATRHARRVYVGGLPPAANEQTIA 392
QATRHARRVYVGGLPP ANEQ++A
Sbjct: 258 QATRHARRVYVGGLPPTANEQSVA 281
>ref|XP_020241585.1| splicing factor U2af large subunit A-like isoform X2 [Asparagus
officinalis]
Length = 452
Score = 64.7 bits (156), Expect = 2e-09
Identities = 35/48 (72%), Positives = 37/48 (77%)
Frame = +3
Query: 249 MAPPASAQTVLFPGLPALVLSMTQQATRHARRVYVGGLPPAANEQTIA 392
M P A+ Q FP +PA SMTQQATRHARRVYVGGLPP ANEQTIA
Sbjct: 148 MVPLAAQQFGSFPMMPAQ--SMTQQATRHARRVYVGGLPPMANEQTIA 193
>ref|XP_007213839.2| splicing factor U2af large subunit B isoform X2 [Prunus persica]
gb|ONI10377.1| hypothetical protein PRUPE_4G044200 [Prunus persica]
Length = 520
Score = 64.7 bits (156), Expect = 2e-09
Identities = 42/76 (55%), Positives = 43/76 (56%), Gaps = 24/76 (31%)
Frame = +3
Query: 237 SGFDMAPPASA------------------QTVLFPGLPALVL------SMTQQATRHARR 344
SGFDMAPPA A Q VL G L L +MTQQATRHARR
Sbjct: 108 SGFDMAPPAGAVLPNAAVSGIPQTMQGVVQNVLPFGAAHLALPLMPAQAMTQQATRHARR 167
Query: 345 VYVGGLPPAANEQTIA 392
VYVGGLPP ANEQTIA
Sbjct: 168 VYVGGLPPLANEQTIA 183
>ref|XP_008225057.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Prunus mume]
Length = 520
Score = 64.7 bits (156), Expect = 2e-09
Identities = 42/76 (55%), Positives = 43/76 (56%), Gaps = 24/76 (31%)
Frame = +3
Query: 237 SGFDMAPPASA------------------QTVLFPGLPALVL------SMTQQATRHARR 344
SGFDMAPPA A Q VL G L L +MTQQATRHARR
Sbjct: 108 SGFDMAPPAGAVLPNAAVSGIPQTMQGVVQNVLPFGAAHLALPLMPAQAMTQQATRHARR 167
Query: 345 VYVGGLPPAANEQTIA 392
VYVGGLPP ANEQTIA
Sbjct: 168 VYVGGLPPLANEQTIA 183
>ref|XP_021825849.1| splicing factor U2af large subunit B-like isoform X3 [Prunus avium]
Length = 521
Score = 64.7 bits (156), Expect = 2e-09
Identities = 42/76 (55%), Positives = 43/76 (56%), Gaps = 24/76 (31%)
Frame = +3
Query: 237 SGFDMAPPASA------------------QTVLFPGLPALVL------SMTQQATRHARR 344
SGFDMAPPA A Q VL G L L +MTQQATRHARR
Sbjct: 108 SGFDMAPPAGAVLPNAAVSGIPQTMQGMVQNVLPFGAAHLALPLMPAQAMTQQATRHARR 167
Query: 345 VYVGGLPPAANEQTIA 392
VYVGGLPP ANEQTIA
Sbjct: 168 VYVGGLPPLANEQTIA 183
>ref|XP_020241577.1| splicing factor U2af large subunit A-like isoform X1 [Asparagus
officinalis]
gb|ONK79710.1| uncharacterized protein A4U43_C01F9250 [Asparagus officinalis]
Length = 528
Score = 64.7 bits (156), Expect = 2e-09
Identities = 35/48 (72%), Positives = 37/48 (77%)
Frame = +3
Query: 249 MAPPASAQTVLFPGLPALVLSMTQQATRHARRVYVGGLPPAANEQTIA 392
M P A+ Q FP +PA SMTQQATRHARRVYVGGLPP ANEQTIA
Sbjct: 148 MVPLAAQQFGSFPMMPAQ--SMTQQATRHARRVYVGGLPPMANEQTIA 193
>gb|KDO79502.1| hypothetical protein CISIN_1g009052mg [Citrus sinensis]
Length = 544
Score = 64.7 bits (156), Expect = 2e-09
Identities = 41/85 (48%), Positives = 45/85 (52%), Gaps = 32/85 (37%)
Frame = +3
Query: 234 ISGFDMAPPASAQ-------------------------------TVLFPGLPAL-VLSMT 317
ISGFDMAPPASA T F LP + V +MT
Sbjct: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQFGALPVMPVQAMT 237
Query: 318 QQATRHARRVYVGGLPPAANEQTIA 392
QQATRHARRVYVGGLPP ANEQ++A
Sbjct: 238 QQATRHARRVYVGGLPPTANEQSVA 262
>ref|XP_023893143.1| splicing factor U2af large subunit B-like [Quercus suber]
gb|POE59979.1| splicing factor u2af large subunit b [Quercus suber]
Length = 586
Score = 64.7 bits (156), Expect = 2e-09
Identities = 42/84 (50%), Positives = 46/84 (54%), Gaps = 31/84 (36%)
Frame = +3
Query: 234 ISGFDMAPPASA--------------QTVLFPG----------------LPAL-VLSMTQ 320
ISGFDMAPPASA T PG LP + V +MTQ
Sbjct: 185 ISGFDMAPPASALLSGAAAVTGQIAGATPTLPGMFPNMFPIATGQQFGALPVMPVQAMTQ 244
Query: 321 QATRHARRVYVGGLPPAANEQTIA 392
QATRHARRVYVGGLPP ANEQ++A
Sbjct: 245 QATRHARRVYVGGLPPTANEQSVA 268