BLASTX nr result
ID: Ophiopogon24_contig00023193
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00023193
(538 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020252806.1| la-related protein 6A [Asparagus officinalis] 79 2e-27
ref|XP_008790044.1| PREDICTED: la-related protein 6A [Phoenix da... 64 8e-09
gb|KVH88325.1| Lupus La protein [Cynara cardunculus var. scolymus] 61 9e-08
ref|XP_002276730.2| PREDICTED: la-related protein 6A isoform X2 ... 61 1e-07
ref|XP_010655648.1| PREDICTED: la-related protein 6A isoform X1 ... 61 1e-07
dbj|GAV89639.1| RRM_5 domain-containing protein, partial [Cephal... 59 2e-07
gb|KHG30828.1| La-related 7 [Gossypium arboreum] 60 2e-07
ref|XP_017616176.1| PREDICTED: la-related protein 6A-like [Gossy... 60 2e-07
gb|PIA41582.1| hypothetical protein AQUCO_02200195v1 [Aquilegia ... 60 3e-07
gb|PIA41584.1| hypothetical protein AQUCO_02200195v1 [Aquilegia ... 60 3e-07
ref|XP_022715559.1| la-related protein 6A-like isoform X3 [Durio... 60 3e-07
ref|XP_022715558.1| la-related protein 6A-like isoform X2 [Durio... 60 3e-07
ref|XP_022715557.1| la-related protein 6A-like isoform X1 [Durio... 60 3e-07
ref|XP_012072101.1| la-related protein 6A [Jatropha curcas] >gi|... 60 3e-07
ref|XP_010919805.1| PREDICTED: la-related protein 6A [Elaeis gui... 60 3e-07
gb|PIA41585.1| hypothetical protein AQUCO_02200195v1 [Aquilegia ... 60 3e-07
gb|PIA41581.1| hypothetical protein AQUCO_02200195v1 [Aquilegia ... 60 3e-07
gb|PIA41583.1| hypothetical protein AQUCO_02200195v1 [Aquilegia ... 60 3e-07
dbj|GAV82323.1| RRM_1 domain-containing protein/La domain-contai... 59 4e-07
gb|PIN23442.1| putative RNA-binding protein [Handroanthus impeti... 59 4e-07
>ref|XP_020252806.1| la-related protein 6A [Asparagus officinalis]
Length = 338
Score = 78.6 bits (192), Expect(3) = 2e-27
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2
Query: 347 SSNGVSKPPPGPRMPDGTRGFTMGRGKPAISEPNQNG 457
SSNGV+KPPPGPRMPDGTRGFTMGRGKPAISEPNQ G
Sbjct: 301 SSNGVNKPPPGPRMPDGTRGFTMGRGKPAISEPNQLG 337
Score = 59.3 bits (142), Expect(3) = 2e-27
Identities = 30/46 (65%), Positives = 32/46 (69%)
Frame = +1
Query: 70 GKYGLNQRGHKETFSEKNSDNQISEMVSDGQKLKSDDYHDETAEKE 207
GKYGL QRG KET EK +DNQ SE +GQKLK D DE AEKE
Sbjct: 219 GKYGLVQRGKKETLPEKGTDNQTSEKPPNGQKLKYADRQDENAEKE 264
Score = 32.3 bits (72), Expect(3) = 2e-27
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 285 SQGWARQNVTGQGHGQ 332
S+GW QN TGQGHGQ
Sbjct: 282 SRGWGPQNATGQGHGQ 297
>ref|XP_008790044.1| PREDICTED: la-related protein 6A [Phoenix dactylifera]
Length = 400
Score = 64.3 bits (155), Expect = 8e-09
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +1
Query: 73 KYGLNQRGHKETFSEKNSDNQISEMVSDGQKLKSDDYHDETAEK 204
KYGL Q+GH+ TFSEKN+D Q +EM +G+K+KS DYHDE AEK
Sbjct: 281 KYGLVQQGHRGTFSEKNNDIQTAEMAGNGKKMKSVDYHDEMAEK 324
Score = 55.8 bits (133), Expect = 7e-06
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 359 VSKPPPGPRMPDGTRGFTMGRGKPAISE 442
+SKP PGPRMPDGTRGFTMGRGKP +S+
Sbjct: 369 MSKPVPGPRMPDGTRGFTMGRGKPIVSD 396
>gb|KVH88325.1| Lupus La protein [Cynara cardunculus var. scolymus]
Length = 347
Score = 61.2 bits (147), Expect = 9e-08
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 5/48 (10%)
Frame = +2
Query: 311 NWARSWTEI---PCGSSNG--VSKPPPGPRMPDGTRGFTMGRGKPAIS 439
NW RS + P G +G + KPPPGPRMPDGTRGFTMGRG+P++S
Sbjct: 300 NWRRSRKQKYQGPSGMGHGSEIPKPPPGPRMPDGTRGFTMGRGRPSVS 347
>ref|XP_002276730.2| PREDICTED: la-related protein 6A isoform X2 [Vitis vinifera]
emb|CBI30861.3| unnamed protein product, partial [Vitis vinifera]
Length = 342
Score = 60.8 bits (146), Expect = 1e-07
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +2
Query: 362 SKPPPGPRMPDGTRGFTMGRGKPAISEPN 448
SKPPPGP+MPDGTRGFTMGRG+P +S PN
Sbjct: 314 SKPPPGPKMPDGTRGFTMGRGRPPVSRPN 342
>ref|XP_010655648.1| PREDICTED: la-related protein 6A isoform X1 [Vitis vinifera]
Length = 365
Score = 60.8 bits (146), Expect = 1e-07
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +2
Query: 362 SKPPPGPRMPDGTRGFTMGRGKPAISEPN 448
SKPPPGP+MPDGTRGFTMGRG+P +S PN
Sbjct: 337 SKPPPGPKMPDGTRGFTMGRGRPPVSRPN 365
>dbj|GAV89639.1| RRM_5 domain-containing protein, partial [Cephalotus follicularis]
Length = 208
Score = 59.3 bits (142), Expect = 2e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 362 SKPPPGPRMPDGTRGFTMGRGKPAISEPN 448
SKPPPGPRMPDGTRGFTMGRG+P IS N
Sbjct: 180 SKPPPGPRMPDGTRGFTMGRGRPPISNQN 208
>gb|KHG30828.1| La-related 7 [Gossypium arboreum]
Length = 368
Score = 60.5 bits (145), Expect = 2e-07
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +2
Query: 362 SKPPPGPRMPDGTRGFTMGRGKPAISEPN 448
SKPPPGPRMPDGTRGFTMGRG+P +S+P+
Sbjct: 340 SKPPPGPRMPDGTRGFTMGRGRPLVSKPS 368
>ref|XP_017616176.1| PREDICTED: la-related protein 6A-like [Gossypium arboreum]
Length = 381
Score = 60.5 bits (145), Expect = 2e-07
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +2
Query: 362 SKPPPGPRMPDGTRGFTMGRGKPAISEPN 448
SKPPPGPRMPDGTRGFTMGRG+P +S+P+
Sbjct: 353 SKPPPGPRMPDGTRGFTMGRGRPLVSKPS 381
>gb|PIA41582.1| hypothetical protein AQUCO_02200195v1 [Aquilegia coerulea]
Length = 297
Score = 59.7 bits (143), Expect = 3e-07
Identities = 27/32 (84%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
Frame = +2
Query: 338 PCGS-SNGVSKPPPGPRMPDGTRGFTMGRGKP 430
P GS S G SKPPPGPRMPDGTRGFTMGRG+P
Sbjct: 257 PTGSRSEGFSKPPPGPRMPDGTRGFTMGRGRP 288
>gb|PIA41584.1| hypothetical protein AQUCO_02200195v1 [Aquilegia coerulea]
Length = 337
Score = 59.7 bits (143), Expect = 3e-07
Identities = 27/32 (84%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
Frame = +2
Query: 338 PCGS-SNGVSKPPPGPRMPDGTRGFTMGRGKP 430
P GS S G SKPPPGPRMPDGTRGFTMGRG+P
Sbjct: 297 PTGSRSEGFSKPPPGPRMPDGTRGFTMGRGRP 328
>ref|XP_022715559.1| la-related protein 6A-like isoform X3 [Durio zibethinus]
Length = 382
Score = 59.7 bits (143), Expect = 3e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 362 SKPPPGPRMPDGTRGFTMGRGKPAISEPNQ 451
SKPPPGPRMPDGTRGFTMGRG+P +S+ N+
Sbjct: 353 SKPPPGPRMPDGTRGFTMGRGRPLVSKQNK 382
>ref|XP_022715558.1| la-related protein 6A-like isoform X2 [Durio zibethinus]
Length = 387
Score = 59.7 bits (143), Expect = 3e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 362 SKPPPGPRMPDGTRGFTMGRGKPAISEPNQ 451
SKPPPGPRMPDGTRGFTMGRG+P +S+ N+
Sbjct: 358 SKPPPGPRMPDGTRGFTMGRGRPLVSKQNK 387
>ref|XP_022715557.1| la-related protein 6A-like isoform X1 [Durio zibethinus]
Length = 387
Score = 59.7 bits (143), Expect = 3e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 362 SKPPPGPRMPDGTRGFTMGRGKPAISEPNQ 451
SKPPPGPRMPDGTRGFTMGRG+P +S+ N+
Sbjct: 358 SKPPPGPRMPDGTRGFTMGRGRPLVSKQNK 387
>ref|XP_012072101.1| la-related protein 6A [Jatropha curcas]
gb|KDP37969.1| hypothetical protein JCGZ_04612 [Jatropha curcas]
Length = 397
Score = 59.7 bits (143), Expect = 3e-07
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +2
Query: 362 SKPPPGPRMPDGTRGFTMGRGKPAISEPNQ 451
SKPPPGP+MPDGTRGFTMGRG+P +S NQ
Sbjct: 365 SKPPPGPKMPDGTRGFTMGRGRPPVSNQNQ 394
>ref|XP_010919805.1| PREDICTED: la-related protein 6A [Elaeis guineensis]
Length = 401
Score = 59.7 bits (143), Expect = 3e-07
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +1
Query: 73 KYGLNQRGHKETFSEKNSDNQISEMVSDGQKLKSDDYHDETAEK 204
KYGL Q+G+K TFSEK++D Q +EM DG+K+KS +YH+E AEK
Sbjct: 278 KYGLVQKGYKGTFSEKSNDIQTTEMTGDGKKMKSVNYHNEMAEK 321
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2
Query: 347 SSNGVSKPPPGPRMPDGTRGFTMGRGKPAISE 442
SS +SKP PGPRMPDGTRGFTMGRG+P +S+
Sbjct: 362 SSEYMSKPVPGPRMPDGTRGFTMGRGRPVVSD 393
>gb|PIA41585.1| hypothetical protein AQUCO_02200195v1 [Aquilegia coerulea]
Length = 406
Score = 59.7 bits (143), Expect = 3e-07
Identities = 27/32 (84%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
Frame = +2
Query: 338 PCGS-SNGVSKPPPGPRMPDGTRGFTMGRGKP 430
P GS S G SKPPPGPRMPDGTRGFTMGRG+P
Sbjct: 366 PTGSRSEGFSKPPPGPRMPDGTRGFTMGRGRP 397
>gb|PIA41581.1| hypothetical protein AQUCO_02200195v1 [Aquilegia coerulea]
Length = 418
Score = 59.7 bits (143), Expect = 3e-07
Identities = 27/32 (84%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
Frame = +2
Query: 338 PCGS-SNGVSKPPPGPRMPDGTRGFTMGRGKP 430
P GS S G SKPPPGPRMPDGTRGFTMGRG+P
Sbjct: 378 PTGSRSEGFSKPPPGPRMPDGTRGFTMGRGRP 409
>gb|PIA41583.1| hypothetical protein AQUCO_02200195v1 [Aquilegia coerulea]
Length = 422
Score = 59.7 bits (143), Expect = 3e-07
Identities = 27/32 (84%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
Frame = +2
Query: 338 PCGS-SNGVSKPPPGPRMPDGTRGFTMGRGKP 430
P GS S G SKPPPGPRMPDGTRGFTMGRG+P
Sbjct: 382 PTGSRSEGFSKPPPGPRMPDGTRGFTMGRGRP 413
>dbj|GAV82323.1| RRM_1 domain-containing protein/La domain-containing protein,
partial [Cephalotus follicularis]
Length = 356
Score = 59.3 bits (142), Expect = 4e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 362 SKPPPGPRMPDGTRGFTMGRGKPAISEPN 448
SKPPPGPRMPDGTRGFTMGRG+P IS N
Sbjct: 328 SKPPPGPRMPDGTRGFTMGRGRPPISNQN 356
>gb|PIN23442.1| putative RNA-binding protein [Handroanthus impetiginosus]
Length = 364
Score = 59.3 bits (142), Expect = 4e-07
Identities = 28/36 (77%), Positives = 30/36 (83%), Gaps = 2/36 (5%)
Frame = +2
Query: 347 SSNGV--SKPPPGPRMPDGTRGFTMGRGKPAISEPN 448
SS+GV SKPPPGPRMPDGTRGFTMGRGKP + N
Sbjct: 329 SSHGVEPSKPPPGPRMPDGTRGFTMGRGKPLATTTN 364