BLASTX nr result

ID: Ophiopogon24_contig00023085 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00023085
         (626 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK78800.1| uncharacterized protein A4U43_C02F22560 [Asparagu...    73   3e-11
ref|XP_008810331.1| PREDICTED: mucin-1-like [Phoenix dactylifera]      68   1e-09
ref|XP_010914770.1| PREDICTED: mental retardation GTPase activat...    65   1e-08
ref|XP_010914769.1| PREDICTED: mental retardation GTPase activat...    65   1e-08
gb|OAY69120.1| Glucan endo-1,3-beta-glucosidase 1 [Ananas comosus]     57   8e-06

>gb|ONK78800.1| uncharacterized protein A4U43_C02F22560 [Asparagus officinalis]
          Length = 749

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/75 (54%), Positives = 45/75 (60%)
 Frame = -2

Query: 568 ESEQKKLTWQVEVTFPTSHRQLLDKKSLTIHDTVSPIAVPSTNPSLXXXXXXXXXXXXXX 389
           +SE+KKL W+ EV FPTS RQLLDKK + IHDTVSPI VPST PS               
Sbjct: 33  QSEEKKLEWEEEVVFPTSRRQLLDKKHVIIHDTVSPIMVPSTEPS-PVTVTVPSTNPPNV 91

Query: 388 XXXXXXXTVPSTNPT 344
                  TVPSTNPT
Sbjct: 92  LPTTSPITVPSTNPT 106


>ref|XP_008810331.1| PREDICTED: mucin-1-like [Phoenix dactylifera]
          Length = 600

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 7/70 (10%)
 Frame = -2

Query: 625 HPQLKDRISAIFIEISPLVESEQKKLTWQVEVTFPTSHRQLLD-------KKSLTIHDTV 467
           H  +++RI  +F EIS + E EQKKL+W+ E+ FP+SHR+LLD           T+HDTV
Sbjct: 256 HALIRERILGLFAEISHVREFEQKKLSWEEELIFPSSHRELLDHDNRSISANKSTVHDTV 315

Query: 466 SPIAVPSTNP 437
           +PI  P+T P
Sbjct: 316 TPITNPATTP 325


>ref|XP_010914770.1| PREDICTED: mental retardation GTPase activating protein homolog
           2-like isoform X2 [Elaeis guineensis]
          Length = 531

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
 Frame = -2

Query: 625 HPQLKDRISAIFIEISPLVESEQKKLTWQVEVTFPTSHRQLLD-------KKSLTIHDTV 467
           H  +++RI  +F EIS + E EQKKL+W+  + FP+SHR+LLD           T+HDT+
Sbjct: 256 HALIRERIFGVFAEISHVREFEQKKLSWEEGLVFPSSHRELLDHDNCSISSNKTTVHDTL 315

Query: 466 SPIAVPSTNP 437
           +P+  P+T P
Sbjct: 316 TPVTNPATTP 325


>ref|XP_010914769.1| PREDICTED: mental retardation GTPase activating protein homolog
           2-like isoform X1 [Elaeis guineensis]
          Length = 599

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
 Frame = -2

Query: 625 HPQLKDRISAIFIEISPLVESEQKKLTWQVEVTFPTSHRQLLD-------KKSLTIHDTV 467
           H  +++RI  +F EIS + E EQKKL+W+  + FP+SHR+LLD           T+HDT+
Sbjct: 256 HALIRERIFGVFAEISHVREFEQKKLSWEEGLVFPSSHRELLDHDNCSISSNKTTVHDTL 315

Query: 466 SPIAVPSTNP 437
           +P+  P+T P
Sbjct: 316 TPVTNPATTP 325


>gb|OAY69120.1| Glucan endo-1,3-beta-glucosidase 1 [Ananas comosus]
          Length = 640

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 12/76 (15%)
 Frame = -2

Query: 625 HPQLKDRISAIFIEISPLVESEQKKLTWQVEVTFPTSHRQLL---DKKSLTIHD------ 473
           +P +  R+   ++++S + E+E++ L W+ ++ FP+SHR+LL    +KS T+ D      
Sbjct: 265 YPAINKRVWGFYVDVSHVGETEKEILNWEEQLIFPSSHRELLLLDHEKSTTVRDTYAPIT 324

Query: 472 ---TVSPIAVPSTNPS 434
              T +PI VPSTNPS
Sbjct: 325 NPVTTTPITVPSTNPS 340


Top