BLASTX nr result

ID: Ophiopogon24_contig00022559 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00022559
         (679 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK66212.1| uncharacterized protein A4U43_C06F5390 [Asparagus...   160   2e-41
ref|XP_020269665.1| chromatin structure-remodeling complex prote...   160   2e-41

>gb|ONK66212.1| uncharacterized protein A4U43_C06F5390 [Asparagus officinalis]
          Length = 1357

 Score =  160 bits (405), Expect = 2e-41
 Identities = 109/227 (48%), Positives = 132/227 (58%), Gaps = 1/227 (0%)
 Frame = -1

Query: 679  CSKSKSSDIQVNTRSIDNVAETSPVTTKIEDSCSDPVKLLDIPGNTRVAEDFFVASIAKE 500
            C+KSKSSDIQVN  ++DN+ E S  T KI  S SD VKLLD+   T + E+   AS    
Sbjct: 1053 CNKSKSSDIQVNNSNMDNIQEASLETRKIAGS-SDSVKLLDVSATTSLPENVCEAS---- 1107

Query: 499  TPDTCADIVKSPDGLVSISEVDNVCKSSSVTIEVADSCTESGQSDVPTLPGLVSKRDDDS 320
              D  +D          +  VD VCKSS VT+EVA+  TE+G  D P+LPG  SK+DDDS
Sbjct: 1108 --DKRSD---------RVCNVDRVCKSSLVTMEVAEGRTETGHPDAPSLPGFTSKKDDDS 1156

Query: 319  DALTCTENTAPVILNQESSFKMTMDLDDKSTSTASTYLDEKINKGHPPKGLAGDDDNVTH 140
               T  E      LNQ +S KMTMDL DKSTS+AST  D+KI      + +   D NV  
Sbjct: 1157 FVRTSNEGATSSHLNQVASSKMTMDL-DKSTSSASTNSDKKIEGQVVEEPMR--DSNVPG 1213

Query: 139  PAERTTELSNSEAIVVAGGESQQVEADKEENTIPNSIS-EVNDSKLQ 2
             AE    LSNS  + VAG E QQVE DK E ++ NS S EVND + Q
Sbjct: 1214 TAECIVALSNSGPVAVAGQELQQVETDKAEGSVDNSCSREVNDLQCQ 1260


>ref|XP_020269665.1| chromatin structure-remodeling complex protein SYD [Asparagus
            officinalis]
          Length = 3302

 Score =  160 bits (405), Expect = 2e-41
 Identities = 109/227 (48%), Positives = 132/227 (58%), Gaps = 1/227 (0%)
 Frame = -1

Query: 679  CSKSKSSDIQVNTRSIDNVAETSPVTTKIEDSCSDPVKLLDIPGNTRVAEDFFVASIAKE 500
            C+KSKSSDIQVN  ++DN+ E S  T KI  S SD VKLLD+   T + E+   AS    
Sbjct: 2493 CNKSKSSDIQVNNSNMDNIQEASLETRKIAGS-SDSVKLLDVSATTSLPENVCEAS---- 2547

Query: 499  TPDTCADIVKSPDGLVSISEVDNVCKSSSVTIEVADSCTESGQSDVPTLPGLVSKRDDDS 320
              D  +D          +  VD VCKSS VT+EVA+  TE+G  D P+LPG  SK+DDDS
Sbjct: 2548 --DKRSD---------RVCNVDRVCKSSLVTMEVAEGRTETGHPDAPSLPGFTSKKDDDS 2596

Query: 319  DALTCTENTAPVILNQESSFKMTMDLDDKSTSTASTYLDEKINKGHPPKGLAGDDDNVTH 140
               T  E      LNQ +S KMTMDL DKSTS+AST  D+KI      + +   D NV  
Sbjct: 2597 FVRTSNEGATSSHLNQVASSKMTMDL-DKSTSSASTNSDKKIEGQVVEEPMR--DSNVPG 2653

Query: 139  PAERTTELSNSEAIVVAGGESQQVEADKEENTIPNSIS-EVNDSKLQ 2
             AE    LSNS  + VAG E QQVE DK E ++ NS S EVND + Q
Sbjct: 2654 TAECIVALSNSGPVAVAGQELQQVETDKAEGSVDNSCSREVNDLQCQ 2700


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