BLASTX nr result
ID: Ophiopogon24_contig00022406
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00022406
(541 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020275563.1| E3 ubiquitin-protein ligase BRE1-like isofor... 114 6e-28
ref|XP_020275562.1| E3 ubiquitin-protein ligase BRE1-like isofor... 101 8e-23
gb|ONK63795.1| uncharacterized protein A4U43_C07F19020 [Asparagu... 104 1e-22
ref|XP_020275521.1| mediator of RNA polymerase II transcription ... 104 1e-22
gb|AQK51534.1| Mediator of RNA polymerase II transcription subun... 96 3e-22
ref|XP_003573223.1| PREDICTED: mediator of RNA polymerase II tra... 101 1e-21
ref|XP_019709588.1| PREDICTED: mediator of RNA polymerase II tra... 100 2e-21
ref|XP_022989023.1| mediator of RNA polymerase II transcription ... 93 3e-21
ref|XP_020179226.1| mediator of RNA polymerase II transcription ... 100 3e-21
ref|XP_016698430.1| PREDICTED: mediator of RNA polymerase II tra... 93 4e-21
ref|XP_006660397.2| PREDICTED: mediator of RNA polymerase II tra... 100 4e-21
ref|XP_020196689.1| mediator of RNA polymerase II transcription ... 99 8e-21
gb|PNS23726.1| hypothetical protein POPTR_T041500v3 [Populus tri... 91 1e-20
gb|ONM03839.1| Mediator of RNA polymerase II transcription subun... 97 1e-20
gb|ABK95291.1| unknown [Populus trichocarpa] 91 2e-20
ref|XP_016698429.1| PREDICTED: mediator of RNA polymerase II tra... 93 2e-20
ref|XP_009384388.1| PREDICTED: mediator of RNA polymerase II tra... 98 2e-20
ref|XP_018676235.1| PREDICTED: mediator of RNA polymerase II tra... 98 2e-20
ref|XP_009384386.1| PREDICTED: mediator of RNA polymerase II tra... 98 2e-20
ref|XP_009384385.1| PREDICTED: mediator of RNA polymerase II tra... 98 2e-20
>ref|XP_020275563.1| E3 ubiquitin-protein ligase BRE1-like isoform X2 [Asparagus
officinalis]
gb|ONK63817.1| uncharacterized protein A4U43_C07F19250 [Asparagus officinalis]
Length = 242
Score = 114 bits (284), Expect = 6e-28
Identities = 75/168 (44%), Positives = 92/168 (54%), Gaps = 8/168 (4%)
Frame = +2
Query: 56 ETNAGPTQPTDVMTMALSYDSDWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMN 235
E N P Q A +WR+ L PE R R+ NKI ETL+R+LP++ + ++ +
Sbjct: 2 EANPTPAQAEAAAGSA----GNWRSDLTPEGRDRVANKILETLKRHLPVNVPEGLSELRK 57
Query: 236 IAVRFEEKIYNAATSQSDYLRIFFLKMLCMEKITPQSXXXXXXXXXXEAVIQNPTYQGVT 415
IAVRFE KIYN ATSQSDYLR LKML ME Q AV QN G+
Sbjct: 58 IAVRFEGKIYNLATSQSDYLRKISLKMLSMEAKVQQPSLITSGTPNDSAVNQNLANSGIR 117
Query: 416 YEAVTFNRPNKRP----HISANRSIVDCD----LEEDYHTKRMKVSEP 535
YE VT + P K P H ANRS VDCD LE++ KR K++EP
Sbjct: 118 YETVTLSYP-KPPTQWLHTPANRS-VDCDRNSILEDEPSAKRRKLNEP 163
>ref|XP_020275562.1| E3 ubiquitin-protein ligase BRE1-like isoform X1 [Asparagus
officinalis]
Length = 264
Score = 101 bits (251), Expect = 8e-23
Identities = 75/190 (39%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Frame = +2
Query: 56 ETNAGPTQPTDVMTMALSYDSDWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMN 235
E N P Q A +WR+ L PE R R+ NKI ETL+R+LP++ + ++ +
Sbjct: 2 EANPTPAQAEAAAGSA----GNWRSDLTPEGRDRVANKILETLKRHLPVNVPEGLSELRK 57
Query: 236 IAVRFEEKIYNAATSQ----------------------SDYLRIFFLKMLCMEKITPQSX 349
IAVRFE KIYN ATSQ SDYLR LKML ME Q
Sbjct: 58 IAVRFEGKIYNLATSQVSKKEKLPITTVSKHKLNNILLSDYLRKISLKMLSMEAKVQQPS 117
Query: 350 XXXXXXXXXEAVIQNPTYQGVTYEAVTFNRPNKRP----HISANRSIVDCD----LEEDY 505
AV QN G+ YE VT + P K P H ANRS VDCD LE++
Sbjct: 118 LITSGTPNDSAVNQNLANSGIRYETVTLSYP-KPPTQWLHTPANRS-VDCDRNSILEDEP 175
Query: 506 HTKRMKVSEP 535
KR K++EP
Sbjct: 176 SAKRRKLNEP 185
>gb|ONK63795.1| uncharacterized protein A4U43_C07F19020 [Asparagus officinalis]
Length = 1267
Score = 104 bits (260), Expect = 1e-22
Identities = 63/116 (54%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Frame = +2
Query: 56 ETNAGPTQPTDVMTMALSYDS---DWRTHLQPEARLRITNKIRETLQRYLPISATDRVNA 226
E N PTQ + +MA S D DWR+ LQPEAR RI NKI ETL+R+LPI+ + N
Sbjct: 2 EGNWRPTQQ-EAASMASSMDGSSGDWRSQLQPEARQRIVNKILETLKRHLPINVPEGFNE 60
Query: 227 IMNIAVRFEEKIYNAATSQSDYLRIFFLKMLCMEKITPQSXXXXXXXXXXEAVIQN 394
+ IA+RFEEKIY AATSQSDYLR LKML ME T QS AV QN
Sbjct: 61 LRKIAIRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQSAPINPSIPNTSAVNQN 116
>ref|XP_020275521.1| mediator of RNA polymerase II transcription subunit 15a [Asparagus
officinalis]
Length = 1306
Score = 104 bits (260), Expect = 1e-22
Identities = 63/116 (54%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Frame = +2
Query: 56 ETNAGPTQPTDVMTMALSYDS---DWRTHLQPEARLRITNKIRETLQRYLPISATDRVNA 226
E N PTQ + +MA S D DWR+ LQPEAR RI NKI ETL+R+LPI+ + N
Sbjct: 2 EGNWRPTQQ-EAASMASSMDGSSGDWRSQLQPEARQRIVNKILETLKRHLPINVPEGFNE 60
Query: 227 IMNIAVRFEEKIYNAATSQSDYLRIFFLKMLCMEKITPQSXXXXXXXXXXEAVIQN 394
+ IA+RFEEKIY AATSQSDYLR LKML ME T QS AV QN
Sbjct: 61 LRKIAIRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQSAPINPSIPNTSAVNQN 116
>gb|AQK51534.1| Mediator of RNA polymerase II transcription subunit 15a [Zea mays]
Length = 129
Score = 96.3 bits (238), Expect = 3e-22
Identities = 49/74 (66%), Positives = 56/74 (75%)
Frame = +2
Query: 116 SDWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMNIAVRFEEKIYNAATSQSDYL 295
SDWRT LQPEAR RI NKI ETL+++LP+S + + + IAVRFEEKIY AATSQSDYL
Sbjct: 30 SDWRTQLQPEARHRIVNKIMETLKKHLPVSVPEGLTELHKIAVRFEEKIYTAATSQSDYL 89
Query: 296 RIFFLKMLCMEKIT 337
R LKML ME T
Sbjct: 90 RKISLKMLSMESQT 103
>ref|XP_003573223.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
[Brachypodium distachyon]
gb|KQJ94698.1| hypothetical protein BRADI_3g12660v3 [Brachypodium distachyon]
Length = 1296
Score = 101 bits (252), Expect = 1e-21
Identities = 56/105 (53%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
Frame = +2
Query: 56 ETNAGPTQPTDVMTMALSYD--------SDWRTHLQPEARLRITNKIRETLQRYLPISAT 211
+ N PTQ +D A D DWR LQPEAR RI NKI ETL+++LP+S
Sbjct: 2 DANWRPTQGSDPAAAAAGVDPNAPPPAGGDWRAQLQPEARSRIVNKIMETLKKHLPVSVP 61
Query: 212 DRVNAIMNIAVRFEEKIYNAATSQSDYLRIFFLKMLCMEKITPQS 346
+ +N + IAVRFEEKIY AATSQSDYLR LKML ME T Q+
Sbjct: 62 EGLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQA 106
>ref|XP_019709588.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
[Elaeis guineensis]
Length = 1398
Score = 100 bits (250), Expect = 2e-21
Identities = 62/138 (44%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Frame = +2
Query: 8 PAIPNAEAVNQNPTYQETNA-----GPTQPTDVMTMALSYDSDWRTHLQPEARLRITNKI 172
P++P ++AV +P E N+ G TD DWR+ LQ +ARLRI NKI
Sbjct: 6 PSVPRSQAVGSSP--MEGNSWRPAHGEPSATDAAA------GDWRSQLQHDARLRIINKI 57
Query: 173 RETLQRYLPISATDRVNAIMNIAVRFEEKIYNAATSQSDYLRIFFLKMLCMEKITPQSXX 352
+TL+R+LPIS + +N + IAVRFEEKIY+AATSQ DYLR LKML ME T +
Sbjct: 58 MDTLKRHLPISVPEGLNELQKIAVRFEEKIYSAATSQPDYLRKISLKMLSMETKTQHTAP 117
Query: 353 XXXXXXXXEAVIQNPTYQ 406
QNPT Q
Sbjct: 118 INSSMPNTTIPNQNPTDQ 135
>ref|XP_022989023.1| mediator of RNA polymerase II transcription subunit 15a-like
isoform X2 [Cucurbita maxima]
Length = 110
Score = 93.2 bits (230), Expect = 3e-21
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = +2
Query: 68 GPTQPTDVMTMALSYDSDWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMNIAVR 247
GPTQ + A DWR+ LQPE+R RI NKI ETL+R++P+S + ++ + IAVR
Sbjct: 7 GPTQGGESGVDA----GDWRSQLQPESRHRIVNKIIETLKRHIPVSGPEGLSELRKIAVR 62
Query: 248 FEEKIYNAATSQSDYLRIFFLKMLCME 328
FEEK+YNAATSQSDYLR L+ML ME
Sbjct: 63 FEEKVYNAATSQSDYLRKISLRMLTME 89
>ref|XP_020179226.1| mediator of RNA polymerase II transcription subunit 15a-like
[Aegilops tauschii subsp. tauschii]
Length = 1313
Score = 100 bits (249), Expect = 3e-21
Identities = 55/105 (52%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
Frame = +2
Query: 56 ETNAGPTQPTDVMTMALSYD--------SDWRTHLQPEARLRITNKIRETLQRYLPISAT 211
+ N PTQ +D A D DWR LQPEAR RI NKI ETL+++LP+S
Sbjct: 2 DANWRPTQGSDPAAAAAGVDPNAPPAAGGDWRAQLQPEARSRIVNKIMETLKKHLPVSVP 61
Query: 212 DRVNAIMNIAVRFEEKIYNAATSQSDYLRIFFLKMLCMEKITPQS 346
+ +N + IAVRFEEKIY AAT+QSDYLR LKML ME T Q+
Sbjct: 62 EGLNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQA 106
>ref|XP_016698430.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X2 [Gossypium hirsutum]
Length = 128
Score = 93.2 bits (230), Expect = 4e-21
Identities = 45/70 (64%), Positives = 55/70 (78%)
Frame = +2
Query: 119 DWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMNIAVRFEEKIYNAATSQSDYLR 298
DWRT LQP++R RI NKI +TL+R+LP S+ D +N + IAVRFEEKI+ AATSQSDYL+
Sbjct: 21 DWRTQLQPDSRQRIVNKIMDTLKRHLPFSSQDSLNELRKIAVRFEEKIFTAATSQSDYLK 80
Query: 299 IFFLKMLCME 328
LKML ME
Sbjct: 81 RISLKMLTME 90
>ref|XP_006660397.2| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
[Oryza brachyantha]
Length = 1322
Score = 100 bits (248), Expect = 4e-21
Identities = 55/103 (53%), Positives = 65/103 (63%), Gaps = 8/103 (7%)
Frame = +2
Query: 62 NAGPTQPTDVMTMALSYD--------SDWRTHLQPEARLRITNKIRETLQRYLPISATDR 217
N PT P+ V A + DWR LQPEAR RI NKI ETL+++LP+S +
Sbjct: 5 NWRPTDPSAVAAAARGIEPTPPAPSGGDWRAQLQPEARTRIVNKIMETLKKHLPVSVPEG 64
Query: 218 VNAIMNIAVRFEEKIYNAATSQSDYLRIFFLKMLCMEKITPQS 346
+N + IAVRFEEKIY AATSQSDYLR LKML ME T Q+
Sbjct: 65 LNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQN 107
>ref|XP_020196689.1| mediator of RNA polymerase II transcription subunit 15a-like
[Aegilops tauschii subsp. tauschii]
Length = 1301
Score = 99.4 bits (246), Expect = 8e-21
Identities = 57/106 (53%), Positives = 66/106 (62%), Gaps = 9/106 (8%)
Frame = +2
Query: 56 ETNAGPTQPTDVMTMALSYD---------SDWRTHLQPEARLRITNKIRETLQRYLPISA 208
+ N PTQ +D A D DWR LQP+AR RI NKI ETL+++LP SA
Sbjct: 2 DANWRPTQGSDPAAGAGGVDPGAPPPPAGGDWRAGLQPDARARIVNKITETLKKHLPASA 61
Query: 209 TDRVNAIMNIAVRFEEKIYNAATSQSDYLRIFFLKMLCMEKITPQS 346
D VN + IAVRFEEKIY AAT+QSDYLR LKML ME T Q+
Sbjct: 62 PDGVNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQA 107
>gb|PNS23726.1| hypothetical protein POPTR_T041500v3 [Populus trichocarpa]
gb|PNS23727.1| hypothetical protein POPTR_T041500v3 [Populus trichocarpa]
Length = 100
Score = 91.3 bits (225), Expect = 1e-20
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2
Query: 119 DWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMNIAVRFEEKIYNAATSQSDYLR 298
DWRT LQP++R RI NKI ETL+R+LP S + + + IAVRFEEKIY AAT+QSDYLR
Sbjct: 5 DWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATNQSDYLR 64
Query: 299 IFFLKMLCME 328
LKML ME
Sbjct: 65 KISLKMLTME 74
>gb|ONM03839.1| Mediator of RNA polymerase II transcription subunit 15a, partial
[Zea mays]
Length = 358
Score = 97.1 bits (240), Expect = 1e-20
Identities = 55/99 (55%), Positives = 63/99 (63%), Gaps = 10/99 (10%)
Frame = +2
Query: 62 NAGPTQPTDVMTMAL----------SYDSDWRTHLQPEARLRITNKIRETLQRYLPISAT 211
N PTQ D T+A SDWRT LQPEAR RI NKI ETL+++LP+S
Sbjct: 6 NWRPTQGADPATVAAVGGVDPNAAAPTGSDWRTQLQPEARQRIVNKIMETLKKHLPVSVP 65
Query: 212 DRVNAIMNIAVRFEEKIYNAATSQSDYLRIFFLKMLCME 328
+ + + IAVRFEEKIY AATSQSDYLR LKML ME
Sbjct: 66 EGLTELHKIAVRFEEKIYTAATSQSDYLRKISLKMLSME 104
>gb|ABK95291.1| unknown [Populus trichocarpa]
Length = 101
Score = 90.9 bits (224), Expect = 2e-20
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2
Query: 119 DWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMNIAVRFEEKIYNAATSQSDYLR 298
DWRT LQP++R RI NKI ETL+R+LP S + + + IAVRFEEKIY AATSQSDYLR
Sbjct: 5 DWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQSDYLR 64
Query: 299 IFFLKMLCME 328
LKML +E
Sbjct: 65 KISLKMLTIE 74
>ref|XP_016698429.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X1 [Gossypium hirsutum]
Length = 181
Score = 93.2 bits (230), Expect = 2e-20
Identities = 45/70 (64%), Positives = 55/70 (78%)
Frame = +2
Query: 119 DWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMNIAVRFEEKIYNAATSQSDYLR 298
DWRT LQP++R RI NKI +TL+R+LP S+ D +N + IAVRFEEKI+ AATSQSDYL+
Sbjct: 21 DWRTQLQPDSRQRIVNKIMDTLKRHLPFSSQDSLNELRKIAVRFEEKIFTAATSQSDYLK 80
Query: 299 IFFLKMLCME 328
LKML ME
Sbjct: 81 RISLKMLTME 90
>ref|XP_009384388.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X4 [Musa acuminata subsp. malaccensis]
Length = 1347
Score = 98.2 bits (243), Expect = 2e-20
Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = +2
Query: 119 DWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMNIAVRFEEKIYNAATSQSDYLR 298
DWRT LQPEAR RI NKI ETL+R+LPIS + +N + IA+RFEEKIY AA +QSDYLR
Sbjct: 23 DWRTQLQPEARHRIVNKIMETLKRHLPISVPEGLNELQKIAIRFEEKIYTAAANQSDYLR 82
Query: 299 IFFLKMLCMEKITPQSXXXXXXXXXXEAVIQNPTYQGV--TYEAVTFNRPNKRPHI 460
LKML ME + S QNP + + N+P+ R +
Sbjct: 83 KISLKMLSMESKSQHSASINPSMSNSTITNQNPVDSALLGVQSQIMVNQPSTRQQL 138
>ref|XP_018676235.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X3 [Musa acuminata subsp. malaccensis]
Length = 1348
Score = 98.2 bits (243), Expect = 2e-20
Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = +2
Query: 119 DWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMNIAVRFEEKIYNAATSQSDYLR 298
DWRT LQPEAR RI NKI ETL+R+LPIS + +N + IA+RFEEKIY AA +QSDYLR
Sbjct: 23 DWRTQLQPEARHRIVNKIMETLKRHLPISVPEGLNELQKIAIRFEEKIYTAAANQSDYLR 82
Query: 299 IFFLKMLCMEKITPQSXXXXXXXXXXEAVIQNPTYQGV--TYEAVTFNRPNKRPHI 460
LKML ME + S QNP + + N+P+ R +
Sbjct: 83 KISLKMLSMESKSQHSASINPSMSNSTITNQNPVDSALLGVQSQIMVNQPSTRQQL 138
>ref|XP_009384386.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X2 [Musa acuminata subsp. malaccensis]
Length = 1380
Score = 98.2 bits (243), Expect = 2e-20
Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = +2
Query: 119 DWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMNIAVRFEEKIYNAATSQSDYLR 298
DWRT LQPEAR RI NKI ETL+R+LPIS + +N + IA+RFEEKIY AA +QSDYLR
Sbjct: 23 DWRTQLQPEARHRIVNKIMETLKRHLPISVPEGLNELQKIAIRFEEKIYTAAANQSDYLR 82
Query: 299 IFFLKMLCMEKITPQSXXXXXXXXXXEAVIQNPTYQGV--TYEAVTFNRPNKRPHI 460
LKML ME + S QNP + + N+P+ R +
Sbjct: 83 KISLKMLSMESKSQHSASINPSMSNSTITNQNPVDSALLGVQSQIMVNQPSTRQQL 138
>ref|XP_009384385.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1381
Score = 98.2 bits (243), Expect = 2e-20
Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = +2
Query: 119 DWRTHLQPEARLRITNKIRETLQRYLPISATDRVNAIMNIAVRFEEKIYNAATSQSDYLR 298
DWRT LQPEAR RI NKI ETL+R+LPIS + +N + IA+RFEEKIY AA +QSDYLR
Sbjct: 23 DWRTQLQPEARHRIVNKIMETLKRHLPISVPEGLNELQKIAIRFEEKIYTAAANQSDYLR 82
Query: 299 IFFLKMLCMEKITPQSXXXXXXXXXXEAVIQNPTYQGV--TYEAVTFNRPNKRPHI 460
LKML ME + S QNP + + N+P+ R +
Sbjct: 83 KISLKMLSMESKSQHSASINPSMSNSTITNQNPVDSALLGVQSQIMVNQPSTRQQL 138