BLASTX nr result
ID: Ophiopogon24_contig00022272
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00022272
(931 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008798244.1| PREDICTED: pentatricopeptide repeat-containi... 56 1e-10
ref|XP_010941649.1| PREDICTED: pentatricopeptide repeat-containi... 56 2e-10
gb|OIT06240.1| pentatricopeptide repeat-containing protein [Nico... 56 4e-10
ref|XP_015159761.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-10
ref|XP_019228505.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-10
ref|XP_016559208.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-10
ref|XP_015066664.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-10
ref|XP_009792923.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-10
ref|XP_016451478.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-10
ref|XP_006365038.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-10
ref|XP_004233239.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-10
gb|PHT89812.1| Pentatricopeptide repeat-containing protein, part... 56 4e-10
ref|XP_009792924.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-10
gb|PHU25678.1| Pentatricopeptide repeat-containing protein, part... 56 4e-10
ref|XP_018684405.1| PREDICTED: pentatricopeptide repeat-containi... 55 9e-10
gb|KRG90712.1| hypothetical protein GLYMA_20G109800 [Glycine max] 55 2e-09
ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containi... 55 2e-09
gb|PHT55338.1| Pentatricopeptide repeat-containing protein, part... 54 2e-09
ref|XP_006605878.1| PREDICTED: pentatricopeptide repeat-containi... 55 2e-09
ref|XP_020244921.1| pentatricopeptide repeat-containing protein ... 55 2e-09
>ref|XP_008798244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
[Phoenix dactylifera]
Length = 605
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS ++Q EQVTTI+RSMHKE +T
Sbjct: 567 PDGGTAKVLLSSCSNEEQMEQVTTIVRSMHKEART 601
Score = 39.3 bits (90), Expect(2) = 1e-10
Identities = 18/22 (81%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YSRKKQY KCLEIFEEM+ GC
Sbjct: 544 YSRKKQYKKCLEIFEEMIDAGC 565
>ref|XP_010941649.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
[Elaeis guineensis]
Length = 601
Score = 56.2 bits (134), Expect(2) = 2e-10
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS ++Q EQVTTI+RSMHKE +T
Sbjct: 563 PDGGTAKVLLSSCSSEEQMEQVTTIVRSMHKEART 597
Score = 38.5 bits (88), Expect(2) = 2e-10
Identities = 18/22 (81%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YSR+KQY KCLEIFEEMV GC
Sbjct: 540 YSRRKQYKKCLEIFEEMVDAGC 561
>gb|OIT06240.1| pentatricopeptide repeat-containing protein [Nicotiana attenuata]
Length = 611
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 573 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 607
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 550 YSKKKQYQRCLEIFEEMIDEGC 571
>ref|XP_015159761.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
isoform X1 [Solanum tuberosum]
Length = 580
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 542 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 576
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 519 YSKKKQYQRCLEIFEEMIDEGC 540
>ref|XP_019228505.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
[Nicotiana attenuata]
Length = 576
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 538 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 572
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 515 YSKKKQYQRCLEIFEEMIDEGC 536
>ref|XP_016559208.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
[Capsicum annuum]
Length = 576
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 538 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 572
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 515 YSKKKQYQRCLEIFEEMIDEGC 536
>ref|XP_015066664.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
[Solanum pennellii]
Length = 576
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 538 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 572
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 515 YSKKKQYQRCLEIFEEMIDEGC 536
>ref|XP_009792923.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
isoform X1 [Nicotiana sylvestris]
ref|XP_016503040.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like isoform X1 [Nicotiana tabacum]
Length = 576
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 538 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 572
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 515 YSKKKQYQRCLEIFEEMIDEGC 536
>ref|XP_016451478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Nicotiana tabacum]
ref|XP_018624137.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
[Nicotiana tomentosiformis]
Length = 576
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 538 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 572
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 515 YSKKKQYQRCLEIFEEMIDEGC 536
>ref|XP_006365038.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
isoform X2 [Solanum tuberosum]
Length = 576
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 538 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 572
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 515 YSKKKQYQRCLEIFEEMIDEGC 536
>ref|XP_004233239.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
[Solanum lycopersicum]
Length = 576
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 538 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 572
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 515 YSKKKQYQRCLEIFEEMIDEGC 536
>gb|PHT89812.1| Pentatricopeptide repeat-containing protein, partial [Capsicum
annuum]
Length = 575
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 537 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 571
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 514 YSKKKQYQRCLEIFEEMIDEGC 535
>ref|XP_009792924.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
isoform X2 [Nicotiana sylvestris]
ref|XP_009792925.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
isoform X2 [Nicotiana sylvestris]
ref|XP_016503041.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like isoform X2 [Nicotiana tabacum]
ref|XP_016503042.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like isoform X2 [Nicotiana tabacum]
Length = 550
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 512 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 546
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 489 YSKKKQYQRCLEIFEEMIDEGC 510
>gb|PHU25678.1| Pentatricopeptide repeat-containing protein, partial [Capsicum
chinense]
Length = 540
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV +SCS + Q EQVTT+IRSMHK VKT
Sbjct: 502 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKT 536
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 479 YSKKKQYQRCLEIFEEMIDEGC 500
>ref|XP_018684405.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
[Musa acuminata subsp. malaccensis]
Length = 613
Score = 55.5 bits (132), Expect(2) = 9e-10
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVK 166
PDGGTAKV ASC+ D+Q EQVTT+IRSMHKE +
Sbjct: 575 PDGGTAKVLLASCTTDEQIEQVTTVIRSMHKEAR 608
Score = 37.0 bits (84), Expect(2) = 9e-10
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
Y+RKKQY +CLEIFEEM+ GC
Sbjct: 552 YARKKQYKRCLEIFEEMIDAGC 573
>gb|KRG90712.1| hypothetical protein GLYMA_20G109800 [Glycine max]
Length = 625
Score = 55.1 bits (131), Expect(2) = 2e-09
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV A+CS + Q EQVTT+IR+MHK++KT
Sbjct: 587 PDGGTAKVLLAACSNEDQTEQVTTVIRTMHKDMKT 621
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KK Y+KCLEIFEEM+ GC
Sbjct: 564 YSKKKLYLKCLEIFEEMIDDGC 585
>ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
isoform X1 [Glycine max]
Length = 576
Score = 55.1 bits (131), Expect(2) = 2e-09
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV A+CS + Q EQVTT+IR+MHK++KT
Sbjct: 538 PDGGTAKVLLAACSNEDQTEQVTTVIRTMHKDMKT 572
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KK Y+KCLEIFEEM+ GC
Sbjct: 515 YSKKKLYLKCLEIFEEMIDDGC 536
>gb|PHT55338.1| Pentatricopeptide repeat-containing protein, partial [Capsicum
baccatum]
Length = 575
Score = 54.3 bits (129), Expect(2) = 2e-09
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVK 166
PDGGTAKV +SCS + Q EQVTT+IRSMHK VK
Sbjct: 537 PDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVK 570
Score = 37.4 bits (85), Expect(2) = 2e-09
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KKQY +CLEIFEEM+ GC
Sbjct: 514 YSKKKQYQRCLEIFEEMIDEGC 535
>ref|XP_006605878.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130
isoform X2 [Glycine max]
gb|KHN11471.1| Pentatricopeptide repeat-containing protein [Glycine soja]
Length = 558
Score = 55.1 bits (131), Expect(2) = 2e-09
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVKT 169
PDGGTAKV A+CS + Q EQVTT+IR+MHK++KT
Sbjct: 520 PDGGTAKVLLAACSNEDQTEQVTTVIRTMHKDMKT 554
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YS+KK Y+KCLEIFEEM+ GC
Sbjct: 497 YSKKKLYLKCLEIFEEMIDDGC 518
>ref|XP_020244921.1| pentatricopeptide repeat-containing protein At2g35130 [Asparagus
officinalis]
Length = 579
Score = 55.1 bits (131), Expect(2) = 2e-09
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +2
Query: 65 PDGGTAKVPQASCSKDQQAEQVTTIIRSMHKEVK 166
PDGGTAKV ASC ++Q EQV+TI+RSMHKEVK
Sbjct: 541 PDGGTAKVLLASCDSEEQIEQVSTIVRSMHKEVK 574
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 17/22 (77%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +1
Query: 1 YSRKKQYMKCLEIFEEMV-PGC 63
YSRKK Y+KCLEI EEMV GC
Sbjct: 518 YSRKKMYVKCLEILEEMVDAGC 539