BLASTX nr result

ID: Ophiopogon24_contig00021792 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00021792
         (422 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020257484.1| ubiquitin carboxyl-terminal hydrolase 17-lik...   121   3e-29

>ref|XP_020257484.1| ubiquitin carboxyl-terminal hydrolase 17-like [Asparagus officinalis]
 gb|ONK75640.1| uncharacterized protein A4U43_C03F19000 [Asparagus officinalis]
          Length = 1046

 Score =  121 bits (304), Expect = 3e-29
 Identities = 76/144 (52%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
 Frame = -1

Query: 422  SATHHGSYDSPP-YRLHGHHCVSFQSTDPFSG-RLPFRRXXXXXXXXXXXXXXXXXXXXX 249
            S T   SYD PP YR H HH  SFQ +D F+G RLPF R                     
Sbjct: 863  SITQQRSYDHPPPYRSHTHHLSSFQPSDIFNGSRLPFSRTDSSSDNSSLLSGSDEGSCST 922

Query: 248  XXXXXXXXXXXXXE--YIFGGSGRFSQNSSSVFSEDSDGFLSSPSPLISRHNFAGDGDVL 75
                            YIFGGSGRFS NSS VFSEDSDGF+SSP  L++RHNFAG+ D L
Sbjct: 923  DSTRESTSSTTEELSEYIFGGSGRFSMNSS-VFSEDSDGFMSSP--LVARHNFAGESDGL 979

Query: 74   SYGERLGWERKEEVGLEGRESPQF 3
            SYGERLGWER+E   +EGRESPQF
Sbjct: 980  SYGERLGWERRE---VEGRESPQF 1000


Top