BLASTX nr result

ID: Ophiopogon24_contig00021756 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00021756
         (352 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241445.1| small GTPase LIP1 isoform X2 [Asparagus offi...    56   8e-07
ref|XP_020241444.1| small GTPase LIP1 isoform X1 [Asparagus offi...    56   9e-07
ref|XP_010915100.1| PREDICTED: uncharacterized GTP-binding prote...    55   2e-06

>ref|XP_020241445.1| small GTPase LIP1 isoform X2 [Asparagus officinalis]
          Length = 297

 Score = 56.2 bits (134), Expect = 8e-07
 Identities = 29/60 (48%), Positives = 33/60 (55%)
 Frame = +1

Query: 1   ETYKHNAVPPLPAQRNXXXXXXXXXXXXFSVAENYSFQRFXXXXXXXXXXXXXKRSDINV 180
           + YK+NAVPPLPAQRN            FSV++NYSFQR              KRSDINV
Sbjct: 238 DAYKYNAVPPLPAQRNLTPPTTLYPQQPFSVSDNYSFQRLSSSGLSEIGSTRSKRSDINV 297


>ref|XP_020241444.1| small GTPase LIP1 isoform X1 [Asparagus officinalis]
 gb|ONK59388.1| uncharacterized protein A4U43_C08F5920 [Asparagus officinalis]
          Length = 336

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 29/60 (48%), Positives = 33/60 (55%)
 Frame = +1

Query: 1   ETYKHNAVPPLPAQRNXXXXXXXXXXXXFSVAENYSFQRFXXXXXXXXXXXXXKRSDINV 180
           + YK+NAVPPLPAQRN            FSV++NYSFQR              KRSDINV
Sbjct: 277 DAYKYNAVPPLPAQRNLTPPTTLYPQQPFSVSDNYSFQRLSSSGLSEIGSTRSKRSDINV 336


>ref|XP_010915100.1| PREDICTED: uncharacterized GTP-binding protein At5g64813-like
           [Elaeis guineensis]
          Length = 336

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 28/60 (46%), Positives = 33/60 (55%)
 Frame = +1

Query: 1   ETYKHNAVPPLPAQRNXXXXXXXXXXXXFSVAENYSFQRFXXXXXXXXXXXXXKRSDINV 180
           E+YK+NA+PPLPAQRN             S +ENYSFQRF             KR+DINV
Sbjct: 277 ESYKYNALPPLPAQRNLTPPPTLYPQQPMSTSENYSFQRFSASSLPDIGSTRSKRADINV 336


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