BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00021388
         (504 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK63108.1| uncharacterized protein A4U43_C07F11500 [Asparagu...   141   8e-36
ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase...   141   9e-36
ref|XP_008781193.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA...    73   6e-12
ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subuni...    70   7e-11
ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subuni...    57   3e-06

>gb|ONK63108.1| uncharacterized protein A4U43_C07F11500 [Asparagus officinalis]
          Length = 705

 Score =  141 bits (355), Expect = 8e-36
 Identities = 86/167 (51%), Positives = 99/167 (59%)
 Frame = +3

Query: 3   DVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFQSTVIIGDSVNAV 182
           D SELIAKQLE+VV+AE                           +DFQST+I GD VN V
Sbjct: 276 DASELIAKQLEEVVLAEKKKKKVKKSKSSSSNARKIASGRKNDKIDFQSTIITGDLVN-V 334

Query: 183 APSTSSVSFLGSGEQSAKKSEDDAHIMNKTESISHIESDGVMCWEGANFEKKEASQKTGY 362
              TSS S L     S+ K   + H+ NKTE + + ESD VM   G + EKK  SQ+   
Sbjct: 335 TSGTSSTSSL----DSSSKDSVNVHVKNKTEPLGYGESDDVMLSGGVSMEKKHVSQENEL 390

Query: 363 KSSLKTSRSKGGNRSVKWADERNSEALENKKDIPQVMQEEDSDISLR 503
           KSSLKTSRSKGGNRSVKWADE   E LE+KKD PQVM+EED D SLR
Sbjct: 391 KSSLKTSRSKGGNRSVKWADEVILEVLEDKKDTPQVMREEDLDSSLR 437


>ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase II subunit B1 CTD
           phosphatase RPAP2 homolog [Asparagus officinalis]
          Length = 736

 Score =  141 bits (355), Expect = 9e-36
 Identities = 86/167 (51%), Positives = 99/167 (59%)
 Frame = +3

Query: 3   DVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFQSTVIIGDSVNAV 182
           D SELIAKQLE+VV+AE                           +DFQST+I GD VN V
Sbjct: 307 DASELIAKQLEEVVLAEKKKKKVKKSKSSSSNARKIASGRKNDKIDFQSTIITGDLVN-V 365

Query: 183 APSTSSVSFLGSGEQSAKKSEDDAHIMNKTESISHIESDGVMCWEGANFEKKEASQKTGY 362
              TSS S L     S+ K   + H+ NKTE + + ESD VM   G + EKK  SQ+   
Sbjct: 366 TSGTSSTSSL----DSSSKDSVNVHVKNKTEPLGYGESDDVMLSGGVSMEKKHVSQENEL 421

Query: 363 KSSLKTSRSKGGNRSVKWADERNSEALENKKDIPQVMQEEDSDISLR 503
           KSSLKTSRSKGGNRSVKWADE   E LE+KKD PQVM+EED D SLR
Sbjct: 422 KSSLKTSRSKGGNRSVKWADEVILEVLEDKKDTPQVMREEDLDSSLR 468


>ref|XP_008781193.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit
           B1 CTD phosphatase RPAP2 homolog [Phoenix dactylifera]
          Length = 689

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 62/195 (31%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
 Frame = +3

Query: 3   DVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXXXXXX-LDFQSTVIIGDSVNA 179
           DVSE I K+LEDVV+ E                            +DF+S +++GD   A
Sbjct: 233 DVSEAIIKKLEDVVLLETKTKTTKTSSKSLKPKPTSKVDESKNNQVDFRSVIVMGDDAQA 292

Query: 180 V---------------------APSTSSVSFLGSGEQSAKKSEDDAHIMNKTESISHIES 296
                                 AP  SSV+     EQ      ++ H+ N+ E   ++E+
Sbjct: 293 SCVSTQNHSEQFNFTSPMIIDQAPKMSSVTAQNRPEQLDNNLNNEVHLENEIE---YLET 349

Query: 297 DGVMCWEGANFEKKEASQKTGYKSSLKTSRSKGGNRSVKWADERNSEALENKKDIPQ--- 467
                      EKKE   +T  KSSLK S SK G R+VKWADE   +ALE +KD P+   
Sbjct: 350 AQKELKYRVKLEKKE---ETALKSSLKASGSKVGRRTVKWADEEKDKALEERKDGPESNI 406

Query: 468 ---VMQEEDSDISLR 503
                 E+D D SLR
Sbjct: 407 STGASHEDDDDSSLR 421


>ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Musa acuminata subsp. malaccensis]
          Length = 668

 Score = 70.1 bits (170), Expect = 7e-11
 Identities = 61/179 (34%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
 Frame = +3

Query: 3   DVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXXXXXX-LDFQSTVIIGDSV-- 173
           D SE IAK+LE+V++ E                            ++F ST+I+G+ V  
Sbjct: 232 DASEAIAKKLEEVLLEEKKAKTTKSASKSSKSKASKHSKKNKTHKVEFMSTIIVGEQVPP 291

Query: 174 --NAVAPSTSSVSFLGSGEQSAKKSEDDAHIMNKTESISHIESDGVMCWEGANFEKKEAS 347
             +A A +T  + +  +     K+S     ++++ +S  H+ES          FEKK + 
Sbjct: 292 GSSAAAQNTPKLDYTSTTFVGDKES-----LISELDSGIHMESTTGSQKVAYEFEKKVSM 346

Query: 348 QKTGY-KSSLKTSRSKGGNRSVKWADERNSEALENKKD------IPQVMQEEDSDISLR 503
            K    KSSLKTSRSK   RSVKWADER + A E +KD       P+  Q ED D SLR
Sbjct: 347 DKGSVLKSSLKTSRSKNAGRSVKWADERENMAQEERKDDLKSSTKPEESQVED-DSSLR 404


>ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Elaeis guineensis]
          Length = 681

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 21/188 (11%)
 Frame = +3

Query: 3   DVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXXXXXX-LDFQSTVIIGDSVNA 179
           DVSE IAK+LED+ + E                            +DF+S +++GD    
Sbjct: 233 DVSEAIAKKLEDMDLLEKKTKATKTSSKSLKAKPTRKVNKSKNNQMDFKSVIVMGDEAQT 292

Query: 180 VAPSTSSVS----FLGSG--EQSAKKS--------EDDAHIMNKTESISHIESDGVMCWE 317
            + ST + S    F      +Q +K S         ++ H+ N+ ES+   + +     +
Sbjct: 293 SSVSTKNHSEQFDFTSPMIIDQPSKTSFVELDNNLNNEVHLENELESLEIAQKE---LKD 349

Query: 318 GANFEKKEASQKTGYKSSLKTSRSKGGNRSVKWADERNSEALENKKDIPQ------VMQE 479
               EKKE    T  KSSLK + SK G ++VKWAD    +A E +KD P+       +  
Sbjct: 350 RVKMEKKE----TALKSSLKAAGSKVGRQTVKWADMEKDKAPEERKDGPEGNISTGALHG 405

Query: 480 EDSDISLR 503
           +D   SLR
Sbjct: 406 DDDGSSLR 413