BLASTX nr result

ID: Ophiopogon24_contig00021273 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00021273
         (735 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OVA06561.1| SWAP/Surp [Macleaya cordata]                            69   2e-09
ref|XP_020268689.1| protein RRC1-like isoform X2 [Asparagus offi...    60   2e-06
ref|XP_020268644.1| protein RRC1-like isoform X1 [Asparagus offi...    60   2e-06

>gb|OVA06561.1| SWAP/Surp [Macleaya cordata]
          Length = 1049

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
 Frame = +2

Query: 5    DVMMAMILLGSGIAARAEAGV-HKRDHQPETETGKGRAMQIGIGTDTVKETDHVMRKMKG 181
            D M+ + L G+ IA +A+  V +   HQPET   K    +IGIGT  V E   + R+MKG
Sbjct: 938  DEMIPVNLQGNDIAVKAKVEVLNVSHHQPETGIEKLIWTRIGIGT--VVEIGVMSRRMKG 995

Query: 182  GGSVRRVEAEREMIMKGIELEKGTGIIGEERGNE 283
            GGS RRV  ER  IM GI++E+GTG IG E+G+E
Sbjct: 996  GGSARRVGVERGTIMIGIKVERGTG-IGGEKGSE 1028


>ref|XP_020268689.1| protein RRC1-like isoform X2 [Asparagus officinalis]
          Length = 971

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 44/90 (48%), Positives = 48/90 (53%)
 Frame = +2

Query: 2    GDVMMAMILLGSGIAARAEAGVHKRDHQPETETGKGRAMQIGIGTDTVKETDHVMRKMKG 181
            G VMM +IL G G  AR E   H+R H PE E    R  Q GIG   +KE          
Sbjct: 865  GGVMMVLILQGRGTVARVEVIAHRRGHWPEKE----RTTQTGIG---IKE---------- 907

Query: 182  GGSVRRVEAEREMIMKGIELEKGTGIIGEE 271
             GSVRR  AE EMI + IE EKGT  IGEE
Sbjct: 908  -GSVRRAGAEIEMISRRIEPEKGTE-IGEE 935


>ref|XP_020268644.1| protein RRC1-like isoform X1 [Asparagus officinalis]
          Length = 973

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 44/90 (48%), Positives = 48/90 (53%)
 Frame = +2

Query: 2    GDVMMAMILLGSGIAARAEAGVHKRDHQPETETGKGRAMQIGIGTDTVKETDHVMRKMKG 181
            G VMM +IL G G  AR E   H+R H PE E    R  Q GIG   +KE          
Sbjct: 867  GGVMMVLILQGRGTVARVEVIAHRRGHWPEKE----RTTQTGIG---IKE---------- 909

Query: 182  GGSVRRVEAEREMIMKGIELEKGTGIIGEE 271
             GSVRR  AE EMI + IE EKGT  IGEE
Sbjct: 910  -GSVRRAGAEIEMISRRIEPEKGTE-IGEE 937


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