BLASTX nr result

ID: Ophiopogon24_contig00021116 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00021116
         (440 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAY48897.1| hypothetical protein CUMW_115160 [Citrus unshiu]       57   6e-07

>dbj|GAY48897.1| hypothetical protein CUMW_115160 [Citrus unshiu]
          Length = 253

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 42/112 (37%), Positives = 44/112 (39%)
 Frame = +2

Query: 23  NGKVVADRKMEVGEICSDMVAAAKEMGVVVTCSGKVVARILMGVVETYIDXXXXXXXXXX 202
           N  VV D  M V EI S  V       VV TCS KV   I    VETY            
Sbjct: 15  NSMVVEDTVMVVVEIYSSRVVEDISREVVETCSSKVAVEISRVGVETYSSKVGVDAFRVV 74

Query: 203 XXTYSGKVGVEILMVAVGTCNDMXXXXXXXXXXXXYSGKVAVGTKKEAGETC 358
             TYS KVGVEI  V   TC+               S KV V  +   GETC
Sbjct: 75  GETYSSKVGVEIFQVVGETCSSTVVAEISRVVEETCSSKVEVVKEMVVGETC 126


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