BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00020954
         (546 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008799500.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-23
gb|PKA65786.1| Pentatricopeptide repeat-containing protein [Apos...    97   7e-20
ref|XP_010929475.1| PREDICTED: pentatricopeptide repeat-containi...    94   6e-19
gb|PKU81826.1| Pentatricopeptide repeat-containing protein [Dend...    83   4e-15
ref|XP_020175991.1| pentatricopeptide repeat-containing protein ...    78   2e-13
ref|XP_010246759.1| PREDICTED: pentatricopeptide repeat-containi...    76   1e-12
ref|XP_021691328.1| pentatricopeptide repeat-containing protein ...    75   2e-12
ref|XP_017250659.1| PREDICTED: pentatricopeptide repeat-containi...    75   2e-12
ref|XP_008457591.1| PREDICTED: pentatricopeptide repeat-containi...    74   4e-12
ref|XP_004497944.2| PREDICTED: pentatricopeptide repeat-containi...    74   4e-12
ref|XP_022153922.1| pentatricopeptide repeat-containing protein ...    74   7e-12
ref|XP_021908561.1| pentatricopeptide repeat-containing protein ...    73   9e-12
ref|XP_018844027.1| PREDICTED: pentatricopeptide repeat-containi...    73   1e-11
gb|EOY14251.1| Pentatricopeptide repeat-containing protein, puta...    73   1e-11
ref|XP_017976454.1| PREDICTED: putative pentatricopeptide repeat...    73   1e-11
gb|PKI42041.1| hypothetical protein CRG98_037494, partial [Punic...    72   3e-11
gb|OAY43274.1| hypothetical protein MANES_08G056300 [Manihot esc...    71   4e-11
ref|XP_021620614.1| pentatricopeptide repeat-containing protein ...    71   4e-11
ref|XP_023900167.1| putative pentatricopeptide repeat-containing...    71   4e-11
gb|OVA13037.1| Pentatricopeptide repeat [Macleaya cordata]             69   2e-10

>ref|XP_008799500.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Phoenix dactylifera]
          Length = 682

 Score =  105 bits (262), Expect = 5e-23
 Identities = 46/85 (54%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = -1

Query: 270 DAFYLNSVIKSHIDSGRSNSALSLFASTR-ASSRPDHFTLPLIVRAVSALDECVHLGRAV 94
           DAF+ NS+IK+H+D+G  ++ALSLF++ R A +RPDH+T PL+ RA+S+  E   LG A+
Sbjct: 53  DAFHWNSIIKAHVDAGLFDAALSLFSAMREAGARPDHYTFPLVNRAISSRTEHFKLGEAI 112

Query: 93  HCLGIQMGFGTNVYFCNALIDLYGK 19
           HCLGIQ GFG+++YFCN +I++Y +
Sbjct: 113 HCLGIQTGFGSDIYFCNTMIEVYAR 137


>gb|PKA65786.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 729

 Score = 96.7 bits (239), Expect = 7e-20
 Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
 Frame = -1

Query: 384 IHQFSLLCRPTPFSLLSPPVSTLSFPRNHLTTTTHHNADAFYLNSVIKSHIDSGRSNSAL 205
           +H F  L     F L   P   L   R+       +  ++F  NS+I+  IDSGR +SAL
Sbjct: 69  LHPFLPLFPSPRFLLTLLPAHHLRTRRSPENPPPINRPNSFQWNSIIRDAIDSGRFDSAL 128

Query: 204 SLFASTRASS-RPDHFTLPLIVRAVSALDECVHLGRAVHCLGIQMGFGTNVYFCNALIDL 28
            LF+S  A+  RPD FTLPLI RAVSAL     LG+A+H +GIQ G  +NVYFCN+L+DL
Sbjct: 129 CLFSSMLAAGVRPDRFTLPLIARAVSALPGSFGLGKAIHSVGIQTGAFSNVYFCNSLLDL 188

Query: 27  Y 25
           Y
Sbjct: 189 Y 189


>ref|XP_010929475.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Elaeis guineensis]
          Length = 692

 Score = 94.0 bits (232), Expect = 6e-19
 Identities = 43/83 (51%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
 Frame = -1

Query: 270 DAFYLNSVIKSHIDSGRSNSALSLFASTR-ASSRPDHFTLPLIVRAVSALDECVHLGRAV 94
           + F  NSVI++H+++G  ++ALSLF++ R A +RPDH+T PL+ RA+S+  E   LG A+
Sbjct: 54  NTFRWNSVIRAHVEAGFFDAALSLFSAMREAGARPDHYTFPLVNRAISSRTEHFKLGEAI 113

Query: 93  HCLGIQMGFGTNVYFCNALIDLY 25
           HCLGIQ GF  +VYFCN +I++Y
Sbjct: 114 HCLGIQTGFDRDVYFCNTMIEVY 136


>gb|PKU81826.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 707

 Score = 82.8 bits (203), Expect = 4e-15
 Identities = 52/119 (43%), Positives = 68/119 (57%), Gaps = 15/119 (12%)
 Frame = -1

Query: 330 PVSTLSF-PRNHLTTTTH-------------HNADAFYLNSVIKSHIDSGRSNSALSLFA 193
           P S LS  P ++LTT T              +  + F  NS +K+ ID+G    ALSLF+
Sbjct: 49  PTSPLSLLPSHYLTTQTSPLWTHCHQFRNYTYFTNVFQWNSTLKARIDAGFFECALSLFS 108

Query: 192 STRASS-RPDHFTLPLIVRAVSALDECVHLGRAVHCLGIQMGFGTNVYFCNALIDLYGK 19
           S  A   RPDHFT PL+ RAVSAL     L + +H LGI++GF  + YF N+LI LYG+
Sbjct: 109 SMLAGGGRPDHFTFPLVARAVSALPGRSGLTKEIHSLGIRLGFSGDGYFRNSLIGLYGR 167


>ref|XP_020175991.1| pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Aegilops tauschii subsp. tauschii]
          Length = 635

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
 Frame = -1

Query: 360 RPTPFSLLSPPVSTLSFPRNHLTTTTHHNADAFYLNSVIKSHIDSGRSNSALSLFAST-R 184
           RPTP SL+             L   T   A A   N+ I+  +DSG   +A+S FA+  R
Sbjct: 10  RPTPASLIPTAAQRCLLLPGSLPPATSACATAPQWNAAIRDRLDSGLPAAAVSAFAAMLR 69

Query: 183 ASSRPDHFTLPLIVRAVSALDECVHLGRAVHCLGIQMGFGTNVYFCNALIDLYGKY 16
           A +RPD FTLPL+ RA ++L     +G A H +G++ GF  N+YFCN L+D Y ++
Sbjct: 70  AGARPDGFTLPLLNRAAASLAVAGLVG-AAHSVGVRTGFALNLYFCNTLVDAYVRH 124


>ref|XP_010246759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Nelumbo nucifera]
          Length = 799

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = -1

Query: 273 ADAFYLNSVIKSHIDSGRSNSALSLFASTRASS-RPDHFTLPLIVRAVSALDECVHLGRA 97
           A+ F  NS++K+H+D G  N AL L+   R      D+FT P+I RA+S+L   +  G+ 
Sbjct: 190 ANTFTWNSIVKAHVDFGLFNDALFLYREMRELGVSHDNFTFPVIHRAISSLGGLLDYGKM 249

Query: 96  VHCLGIQMGFGTNVYFCNALIDLY 25
           VH L IQMGF  ++YFCN +I++Y
Sbjct: 250 VHKLAIQMGFDLDIYFCNTVIEMY 273


>ref|XP_021691328.1| pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Hevea brasiliensis]
          Length = 644

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = -1

Query: 255 NSVIKSHIDSGRSNSALSLFASTRASS-RPDHFTLPLIVRAVSALDECVHLGRAVHCLGI 79
           N ++KSH++ G SN AL L+   R      D FTLP+I RAV +L   V LG+ VH   I
Sbjct: 29  NLIMKSHVNFGLSNEALLLYKKMRELGVEHDTFTLPIINRAVLSLKSRVVLGQMVHSASI 88

Query: 78  QMGFGTNVYFCNALIDLYGKY 16
           ++GFG ++YFCN +I++Y KY
Sbjct: 89  KLGFGFDLYFCNTMIEVYAKY 109


>ref|XP_017250659.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Daucus carota subsp. sativus]
          Length = 687

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = -1

Query: 279 HNADAFYLNSVIKSHIDSGRSNSALSLFASTRASS-RPDHFTLPLIVRAVSALDECVHLG 103
           ++ + F  N +IK+H+D+   +SA SL+ S R      D FT P+I +AV    + +   
Sbjct: 103 NDRNTFVWNCIIKAHVDNNLVDSAFSLYKSMRELGVLHDSFTFPIINQAVLLRQDSLLCA 162

Query: 102 RAVHCLGIQMGFGTNVYFCNALIDLYGK 19
           R +HCL ++MGFG++VYFCN ++D+Y K
Sbjct: 163 RIIHCLAVRMGFGSDVYFCNTMLDIYVK 190


>ref|XP_008457591.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Cucumis melo]
 ref|XP_008457593.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Cucumis melo]
 ref|XP_016902177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Cucumis melo]
 ref|XP_016902178.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Cucumis melo]
 ref|XP_016902179.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Cucumis melo]
 ref|XP_016902180.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Cucumis melo]
          Length = 616

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = -1

Query: 255 NSVIKSHIDSGRSNSALSLFASTR-ASSRPDHFTLPLIVRAVSALDECVHLGRAVHCLGI 79
           N+VIKSH DSG  +SAL L+ + R      D FTLP++ + + ++   V  G  VHC+GI
Sbjct: 4   NNVIKSHFDSGLFHSALLLYKNMREVRVEHDGFTLPIVNQVILSIWVDVVYGGMVHCVGI 63

Query: 78  QMGFGTNVYFCNALIDLYGK 19
           +MGF +++YFCN ++++YGK
Sbjct: 64  RMGFSSDLYFCNTMMEVYGK 83


>ref|XP_004497944.2| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Cicer arietinum]
          Length = 619

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -1

Query: 255 NSVIKSHIDSGRSNSALSLFASTRASSRP-DHFTLPLIVRAVSALDECVHLGRAVHCLGI 79
           N +I+SH+D G  +SAL  +   R  S P D FT P+I RA+S L   V  G+ +HC+ I
Sbjct: 3   NLIIRSHVDMGLFHSALMFYKEMRHMSVPHDTFTFPIINRALSLLKIDVVCGKMIHCVAI 62

Query: 78  QMGFGTNVYFCNALIDLYGK 19
           QMG  +++YFCN +ID+Y K
Sbjct: 63  QMGLDSDLYFCNTMIDVYVK 82


>ref|XP_022153922.1| pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Momordica charantia]
          Length = 611

 Score = 73.6 bits (179), Expect = 7e-12
 Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -1

Query: 255 NSVIKSHIDSGRSNSALSLFASTRASS-RPDHFTLPLIVRAVSALDECVHLGRAVHCLGI 79
           NS+IKSH++SG   SAL L+   R      D FT P++ R + ++   V     VHC+GI
Sbjct: 4   NSIIKSHVESGLFVSALLLYKKMRELGVEHDGFTFPMVNRIIMSIQLDVVYAGMVHCVGI 63

Query: 78  QMGFGTNVYFCNALIDLYGK 19
           +MGFG ++YFCN ++++YGK
Sbjct: 64  RMGFGADLYFCNTMMEVYGK 83


>ref|XP_021908561.1| pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Carica papaya]
          Length = 711

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
 Frame = -1

Query: 339 LSPPVSTLSFPRNHLTTTTHHNADAFYLNSVIKSHIDSGRSNSALSLFASTRASSRP-DH 163
           L+  VS  S P+ H T            NS+I++H+D GR   A SL+   R      D 
Sbjct: 83  LNNAVSVFSSPQEHNTKAW---------NSIIRTHVDFGRVVEAFSLYRRMRELGVVHDG 133

Query: 162 FTLPLIVRAVSALD----ECVHLGRAVHCLGIQMGFGTNVYFCNALIDLYGK 19
           FT P+I  A+S L     + +  G+ +HC+ ++MGFG ++YFCN ++++YGK
Sbjct: 134 FTFPIINSAISLLGGDGGDVIECGKMIHCVAVKMGFGLDLYFCNTMMEVYGK 185


>ref|XP_018844027.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Juglans regia]
          Length = 647

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = -1

Query: 255 NSVIKSHIDSGRSNSALSLFASTRASS-RPDHFTLPLIVRAVSALDECVHLGRAVHCLGI 79
           NS IKSH+DSG   SA  L+   R      D FT P++ RAVS+L   V  G+ VHC+  
Sbjct: 22  NSAIKSHVDSGFFYSAFLLYKEMRGLGVAHDSFTFPIVNRAVSSLQRDVIYGKMVHCVST 81

Query: 78  QMGFGTNVYFCNALIDLYGK 19
           +MGFG +VYF N +I++Y K
Sbjct: 82  KMGFGFDVYFSNTMIEVYVK 101


>gb|EOY14251.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 682

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = -1

Query: 273 ADAFYLNSVIKSHIDSGRSNSALSLFASTRASS-RPDHFTLPLIVRAVSALDECVHLGRA 97
           AD    N +IKSH+D G    AL L+   R    + D FT P+I RAV +++      + 
Sbjct: 56  ADTITWNLIIKSHVDFGYIEKALFLYRKMRKEGVKHDRFTFPIINRAVRSINADAEFAKL 115

Query: 96  VHCLGIQMGFGTNVYFCNALIDLYGK 19
           +HC+ ++MGFG ++YF N ++++YGK
Sbjct: 116 IHCVAVKMGFGFDLYFGNTMVEIYGK 141


>ref|XP_017976454.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580, partial [Theobroma cacao]
          Length = 730

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
 Frame = -1

Query: 537 ITFLV**FHVA*FVPLSVS-PRTPVSEL--EFERILKSTQVSSAIIIR----LPRTYGIH 379
           + FLV   H+  F  L+++ P +P S L    + + K  Q+ +++I+     LP ++   
Sbjct: 21  LPFLVRCHHLKPFSALNLTRPLSPSSSLLHSCKNLRKLKQLHASLILSFGNFLPTSWASR 80

Query: 378 QFSLLCRPTPFSLLSPPVSTLSFPRNHLTTTTHHNADAFYLNSVIKSHIDSGRSNSALSL 199
             S       F+ L   V         L   +   AD    N +IKSH+D G    AL L
Sbjct: 81  LISFYAH---FNDLETAV---------LVVKSLKQADTITWNLIIKSHVDFGYIEKALFL 128

Query: 198 FASTRASS-RPDHFTLPLIVRAVSALDECVHLGRAVHCLGIQMGFGTNVYFCNALIDLYG 22
           +   R    + D FT P+I RAV +++      + +HC+ ++MGFG ++YF N ++++YG
Sbjct: 129 YRKMRKEGVKHDRFTFPIINRAVRSINADAEFAKLIHCVAVKMGFGFDLYFGNTMVEVYG 188

Query: 21  K 19
           K
Sbjct: 189 K 189


>gb|PKI42041.1| hypothetical protein CRG98_037494, partial [Punica granatum]
          Length = 836

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -1

Query: 276 NADAFYLNSVIKSHIDSGRSNSALSLFASTRASS-RPDHFTLPLIVRAVSALDECVHLGR 100
           N +    N +IK+H+D G     L L+   R S+ + D FT P++ RA+SA++  V    
Sbjct: 114 NPNIVLWNLIIKAHVDLGAPREGLVLYRRMRESAVKHDQFTFPIVNRAISAVNGDVLCAG 173

Query: 99  AVHCLGIQMGFGTNVYFCNALIDLYGK 19
            VHCL ++MGF  ++YFCN +ID Y K
Sbjct: 174 MVHCLAVKMGFEADLYFCNTMIDAYCK 200


>gb|OAY43274.1| hypothetical protein MANES_08G056300 [Manihot esculenta]
          Length = 687

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -1

Query: 279 HNADAFYLNSVIKSHIDSGRSNSALSLFASTRASS-RPDHFTLPLIVRAVSALDECVHLG 103
           H  +    N ++K+H+D G SN  L L+   R      D FTLP+I  AV +L   V LG
Sbjct: 63  HKPNTLTWNLMMKAHVDFGLSNEVLFLYKRMRELDVGHDTFTLPIINTAVLSLKSDVVLG 122

Query: 102 RAVHCLGIQMGFGTNVYFCNALIDLYGKY 16
           + VH + I++GFG   YFCN +I++Y KY
Sbjct: 123 QMVHSVSIRLGFGLEQYFCNTMIEVYAKY 151


>ref|XP_021620614.1| pentatricopeptide repeat-containing protein At4g33990-like, partial
           [Manihot esculenta]
          Length = 733

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -1

Query: 279 HNADAFYLNSVIKSHIDSGRSNSALSLFASTRASS-RPDHFTLPLIVRAVSALDECVHLG 103
           H  +    N ++K+H+D G SN  L L+   R      D FTLP+I  AV +L   V LG
Sbjct: 109 HKPNTLTWNLMMKAHVDFGLSNEVLFLYKRMRELDVGHDTFTLPIINTAVLSLKSDVVLG 168

Query: 102 RAVHCLGIQMGFGTNVYFCNALIDLYGKY 16
           + VH + I++GFG   YFCN +I++Y KY
Sbjct: 169 QMVHSVSIRLGFGLEQYFCNTMIEVYAKY 197


>ref|XP_023900167.1| putative pentatricopeptide repeat-containing protein At3g01580
           [Quercus suber]
          Length = 747

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -1

Query: 255 NSVIKSHIDSGRSNSALSLFASTRASS-RPDHFTLPLIVRAVSALDECVHLGRAVHCLGI 79
           N ++KSH+D G   SAL L+ + R      D FT P++ +AVS+L   V  G  VHC+  
Sbjct: 131 NLIMKSHLDVGLFYSALLLYKTMRRLGVAHDSFTFPIVNQAVSSLQSDVMYGEMVHCVST 190

Query: 78  QMGFGTNVYFCNALIDLYGK 19
           +MGFG +VYFCN +I++Y K
Sbjct: 191 KMGFGFDVYFCNTMIEVYLK 210


>gb|OVA13037.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 602

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = -1

Query: 171 PDHFTLPLIVRAVSALDECVHLGRAVHCLGIQMGFGTNVYFCNALIDLYGKYFG*C 4
           PD+FT PL+ RA+S+L   +  G  VHC+ IQMGFG ++YFCN LI++Y K +  C
Sbjct: 8   PDNFTFPLLNRAISSLQNHLRCGEMVHCIAIQMGFGRDLYFCNTLIEVYVKNYSIC 63