BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00020485
         (700 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009341800.1| clp protease proteolytic subunit (chloroplas...    58   2e-06
gb|AKJ77584.1| ATP-dependent Clp protease proteolytic subunit (c...    53   1e-05
gb|ATG83039.1| ATP-dependent Clp protease proteolytic subunit (c...    55   1e-05

>ref|YP_009341800.1| clp protease proteolytic subunit (chloroplast) [Castanopsis
           concinna]
 gb|ALN96497.1| clp protease proteolytic subunit (chloroplast) [Castanopsis
           concinna]
          Length = 213

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -2

Query: 603 FFFNLMPIGVPKVPFRSPGEEDAVWVDV 520
           FFF+ MPIGVPKVPFRSPGEEDA WVD+
Sbjct: 6   FFFHFMPIGVPKVPFRSPGEEDASWVDI 33


>gb|AKJ77584.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
           [Dioscorea nipponica]
          Length = 96

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -2

Query: 588 MPIGVPKVPFRSPGEEDAVWVDV 520
           MPIGVPKVPFRSPGEEDAVWVDV
Sbjct: 1   MPIGVPKVPFRSPGEEDAVWVDV 23


>gb|ATG83039.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
           [Phoenix dactylifera]
          Length = 205

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -2

Query: 588 MPIGVPKVPFRSPGEEDAVWVDV*CD 511
           MPIGVPKVPFRSPGEEDAVWVDV C+
Sbjct: 1   MPIGVPKVPFRSPGEEDAVWVDVWCN 26