BLASTX nr result
ID: Ophiopogon24_contig00020184
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00020184
(453 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY09108.1| Apurinic endonuclease-redox protein, putative iso... 57 2e-06
ref|XP_020241643.1| DNA-(apurinic or apyrimidinic site) lyase, c... 54 2e-06
ref|XP_020241645.1| DNA-(apurinic or apyrimidinic site) lyase, c... 54 2e-06
gb|OMO68266.1| Exodeoxyribonuclease III xth [Corchorus capsularis] 54 2e-06
ref|XP_022743633.1| DNA-(apurinic or apyrimidinic site) lyase, c... 55 7e-06
ref|XP_022743632.1| DNA-(apurinic or apyrimidinic site) lyase, c... 55 7e-06
ref|XP_007028606.2| PREDICTED: DNA-(apurinic or apyrimidinic sit... 55 7e-06
ref|XP_022743631.1| DNA-(apurinic or apyrimidinic site) lyase, c... 55 7e-06
gb|PKU78843.1| Apurinic endonuclease-redox protein [Dendrobium c... 53 9e-06
ref|XP_020672282.1| DNA-(apurinic or apyrimidinic site) lyase, c... 53 9e-06
ref|XP_020672283.1| DNA-(apurinic or apyrimidinic site) lyase, c... 53 9e-06
ref|XP_020672284.1| DNA-(apurinic or apyrimidinic site) lyase, c... 53 9e-06
ref|XP_020672285.1| DNA-(apurinic or apyrimidinic site) lyase, c... 53 9e-06
ref|XP_020672286.1| DNA-(apurinic or apyrimidinic site) lyase, c... 53 9e-06
>gb|EOY09108.1| Apurinic endonuclease-redox protein, putative isoform 1 [Theobroma
cacao]
Length = 535
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/43 (65%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Frame = +2
Query: 332 GTSYLEASW--TFRK-HPGAVAYTYWGYRHG*RKTNKGSTSSY 451
GT++L + TFRK HPGAV YTYWGYRHG RKTNKG Y
Sbjct: 459 GTNFLSRGFVDTFRKQHPGAVGYTYWGYRHGVRKTNKGWRLDY 501
>ref|XP_020241643.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
[Asparagus officinalis]
ref|XP_020241644.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
[Asparagus officinalis]
gb|ONK61462.1| uncharacterized protein A4U43_C08F30170 [Asparagus officinalis]
Length = 537
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 25/32 (78%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = +2
Query: 359 TFRK-HPGAVAYTYWGYRHG*RKTNKGSTSSY 451
TFRK HPG VAYTYWGYRHG RKTNKG Y
Sbjct: 472 TFRKQHPGVVAYTYWGYRHGGRKTNKGWRLDY 503
Score = 24.6 bits (52), Expect(2) = 2e-06
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 331 RNFLSRGFVD 360
RNFLSRGFVD
Sbjct: 462 RNFLSRGFVD 471
>ref|XP_020241645.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2
[Asparagus officinalis]
ref|XP_020241646.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2
[Asparagus officinalis]
Length = 505
Score = 54.3 bits (129), Expect(2) = 2e-06
Identities = 25/32 (78%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = +2
Query: 359 TFRK-HPGAVAYTYWGYRHG*RKTNKGSTSSY 451
TFRK HPG VAYTYWGYRHG RKTNKG Y
Sbjct: 440 TFRKQHPGVVAYTYWGYRHGGRKTNKGWRLDY 471
Score = 24.6 bits (52), Expect(2) = 2e-06
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 331 RNFLSRGFVD 360
RNFLSRGFVD
Sbjct: 430 RNFLSRGFVD 439
>gb|OMO68266.1| Exodeoxyribonuclease III xth [Corchorus capsularis]
Length = 127
Score = 53.9 bits (128), Expect = 2e-06
Identities = 27/43 (62%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +2
Query: 332 GTSYLEASW--TFRK-HPGAVAYTYWGYRHG*RKTNKGSTSSY 451
GT++L TFRK HPG V YTYWGYRHG RKTNKG Y
Sbjct: 51 GTNFLSRGLVDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDY 93
>ref|XP_022743633.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X3
[Durio zibethinus]
Length = 510
Score = 55.1 bits (131), Expect = 7e-06
Identities = 27/43 (62%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Frame = +2
Query: 332 GTSYLEASW--TFRK-HPGAVAYTYWGYRHG*RKTNKGSTSSY 451
GT++L + TFRK HPG V YTYWGYRHG RKTNKG Y
Sbjct: 434 GTNFLSKGFVDTFRKQHPGVVGYTYWGYRHGARKTNKGWRLDY 476
>ref|XP_022743632.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2
[Durio zibethinus]
Length = 535
Score = 55.1 bits (131), Expect = 7e-06
Identities = 27/43 (62%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Frame = +2
Query: 332 GTSYLEASW--TFRK-HPGAVAYTYWGYRHG*RKTNKGSTSSY 451
GT++L + TFRK HPG V YTYWGYRHG RKTNKG Y
Sbjct: 459 GTNFLSKGFVDTFRKQHPGVVGYTYWGYRHGARKTNKGWRLDY 501
>ref|XP_007028606.2| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic
[Theobroma cacao]
Length = 535
Score = 55.1 bits (131), Expect = 7e-06
Identities = 27/43 (62%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Frame = +2
Query: 332 GTSYLEASW--TFRK-HPGAVAYTYWGYRHG*RKTNKGSTSSY 451
GT++L + TFRK HPG V YTYWGYRHG RKTNKG Y
Sbjct: 459 GTNFLSRGFVDTFRKQHPGVVGYTYWGYRHGVRKTNKGWRLDY 501
>ref|XP_022743631.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
[Durio zibethinus]
Length = 537
Score = 55.1 bits (131), Expect = 7e-06
Identities = 27/43 (62%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Frame = +2
Query: 332 GTSYLEASW--TFRK-HPGAVAYTYWGYRHG*RKTNKGSTSSY 451
GT++L + TFRK HPG V YTYWGYRHG RKTNKG Y
Sbjct: 461 GTNFLSKGFVDTFRKQHPGVVGYTYWGYRHGARKTNKGWRLDY 503
>gb|PKU78843.1| Apurinic endonuclease-redox protein [Dendrobium catenatum]
Length = 556
Score = 53.1 bits (126), Expect(2) = 9e-06
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2
Query: 365 RKHPGAVAYTYWGYRHG*RKTNKGSTSSY 451
R+HPG VAYTYWGYRHG RKTNKG Y
Sbjct: 494 RQHPGVVAYTYWGYRHGGRKTNKGWRLDY 522
Score = 23.9 bits (50), Expect(2) = 9e-06
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 325 YLRNFLSRGFVD 360
+ +NFLSRGFVD
Sbjct: 479 FQKNFLSRGFVD 490
>ref|XP_020672282.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
[Dendrobium catenatum]
Length = 556
Score = 53.1 bits (126), Expect(2) = 9e-06
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2
Query: 365 RKHPGAVAYTYWGYRHG*RKTNKGSTSSY 451
R+HPG VAYTYWGYRHG RKTNKG Y
Sbjct: 494 RQHPGVVAYTYWGYRHGGRKTNKGWRLDY 522
Score = 23.9 bits (50), Expect(2) = 9e-06
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 325 YLRNFLSRGFVD 360
+ +NFLSRGFVD
Sbjct: 479 FQKNFLSRGFVD 490
>ref|XP_020672283.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2
[Dendrobium catenatum]
Length = 555
Score = 53.1 bits (126), Expect(2) = 9e-06
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2
Query: 365 RKHPGAVAYTYWGYRHG*RKTNKGSTSSY 451
R+HPG VAYTYWGYRHG RKTNKG Y
Sbjct: 493 RQHPGVVAYTYWGYRHGGRKTNKGWRLDY 521
Score = 23.9 bits (50), Expect(2) = 9e-06
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 325 YLRNFLSRGFVD 360
+ +NFLSRGFVD
Sbjct: 478 FQKNFLSRGFVD 489
>ref|XP_020672284.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X3
[Dendrobium catenatum]
Length = 536
Score = 53.1 bits (126), Expect(2) = 9e-06
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2
Query: 365 RKHPGAVAYTYWGYRHG*RKTNKGSTSSY 451
R+HPG VAYTYWGYRHG RKTNKG Y
Sbjct: 474 RQHPGVVAYTYWGYRHGGRKTNKGWRLDY 502
Score = 23.9 bits (50), Expect(2) = 9e-06
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 325 YLRNFLSRGFVD 360
+ +NFLSRGFVD
Sbjct: 459 FQKNFLSRGFVD 470
>ref|XP_020672285.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X4
[Dendrobium catenatum]
Length = 529
Score = 53.1 bits (126), Expect(2) = 9e-06
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2
Query: 365 RKHPGAVAYTYWGYRHG*RKTNKGSTSSY 451
R+HPG VAYTYWGYRHG RKTNKG Y
Sbjct: 467 RQHPGVVAYTYWGYRHGGRKTNKGWRLDY 495
Score = 23.9 bits (50), Expect(2) = 9e-06
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 325 YLRNFLSRGFVD 360
+ +NFLSRGFVD
Sbjct: 452 FQKNFLSRGFVD 463
>ref|XP_020672286.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X5
[Dendrobium catenatum]
ref|XP_020672287.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X5
[Dendrobium catenatum]
ref|XP_020672288.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X5
[Dendrobium catenatum]
ref|XP_020672289.1| DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X5
[Dendrobium catenatum]
Length = 501
Score = 53.1 bits (126), Expect(2) = 9e-06
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2
Query: 365 RKHPGAVAYTYWGYRHG*RKTNKGSTSSY 451
R+HPG VAYTYWGYRHG RKTNKG Y
Sbjct: 439 RQHPGVVAYTYWGYRHGGRKTNKGWRLDY 467
Score = 23.9 bits (50), Expect(2) = 9e-06
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 325 YLRNFLSRGFVD 360
+ +NFLSRGFVD
Sbjct: 424 FQKNFLSRGFVD 435